Literature DB >> 21589565

N-(3-Octyl-4-oxo-1,3-thia-zolidin-2-yl-idene)benzamide.

Hua-Rong Zhao1, Hai-Yan Wang, Xiang-Wu Meng.   

Abstract

In the title compound, C(18)H(24)N(2)O(2)S, the thia-zolidinone ring is almost coplanar [maximum atomic deviation = 0.017 (3) Å], and is coplanar with the phenyl ring [dihedral angle = 0.62 (13)°]. The octyl group displays an extended conformation. In the crystal, weak inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into supra-molecular chains along [210].

Entities:  

Year:  2010        PMID: 21589565      PMCID: PMC3011722          DOI: 10.1107/S1600536810047884

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For pharmaceutical applications of thia­zolidinones, see: Dwivedi et al. (1972 ▶); Chandrakant et al. (2004 ▶). For the synthesis, see: Peng et al. (2004 ▶).

Experimental

Crystal data

C18H24N2O2S M = 332.45 Triclinic, a = 5.3342 (3) Å b = 8.6196 (5) Å c = 20.0775 (12) Å α = 97.008 (5)° β = 92.870 (4)° γ = 99.477 (4)° V = 901.41 (9) Å3 Z = 2 Mo Kα radiation μ = 0.19 mm−1 T = 293 K 0.26 × 0.18 × 0.16 mm

Data collection

Oxford Diffraction Nova A diffractometer 8685 measured reflections 3205 independent reflections 2371 reflections with I > 2σ(I) R int = 0.039

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.145 S = 1.03 3205 reflections 208 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.17 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2008 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810047884/xu5080sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810047884/xu5080Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H24N2O2SZ = 2
Mr = 332.45F(000) = 356
Triclinic, P1Dx = 1.225 Mg m3
Hall symbol: -p 1Mo Kα radiation, λ = 0.71073 Å
a = 5.3342 (3) ÅCell parameters from 2856 reflections
b = 8.6196 (5) Åθ = 4.5–67.0°
c = 20.0775 (12) ŵ = 0.19 mm1
α = 97.008 (5)°T = 293 K
β = 92.870 (4)°Prism, yellow
γ = 99.477 (4)°0.26 × 0.18 × 0.16 mm
V = 901.41 (9) Å3
Oxford Diffraction Nova A diffractometer2371 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.039
graphiteθmax = 25.1°, θmin = 2.1°
ω scansh = −6→5
8685 measured reflectionsk = −9→10
3205 independent reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.145H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0633P)2 + 0.4272P] where P = (Fo2 + 2Fc2)/3
3205 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.17 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N20.2339 (4)0.3596 (2)0.30556 (10)0.0496 (5)
N1−0.1304 (4)0.2176 (2)0.34097 (10)0.0492 (5)
C90.4393 (5)0.4805 (3)0.32305 (14)0.0533 (6)
C80.0680 (5)0.3283 (3)0.35492 (12)0.0464 (6)
C100.4427 (5)0.5499 (3)0.39502 (14)0.0585 (7)
H10A0.44220.66300.39820.070*
H10B0.59520.53370.41970.070*
O1−0.2580 (4)0.2654 (2)0.44909 (9)0.0680 (6)
O20.5957 (4)0.5200 (2)0.28388 (11)0.0733 (6)
S10.16338 (13)0.45285 (8)0.42998 (3)0.0534 (2)
C7−0.2882 (5)0.1901 (3)0.39283 (13)0.0508 (6)
C1−0.5089 (5)0.0581 (3)0.37455 (13)0.0495 (6)
C110.1963 (5)0.2715 (3)0.23775 (13)0.0569 (7)
H11A0.11250.16380.24020.068*
H11B0.36130.26630.22020.068*
C2−0.5494 (5)−0.0279 (3)0.31152 (14)0.0598 (7)
H2−0.4341−0.00640.27920.072*
C6−0.6820 (5)0.0229 (3)0.42264 (15)0.0606 (7)
H6−0.65550.07950.46560.073*
C5−0.8909 (6)−0.0944 (4)0.40707 (18)0.0712 (8)
H5−1.0049−0.11720.43950.085*
C4−0.9324 (6)−0.1783 (4)0.34373 (19)0.0735 (9)
H4−1.0759−0.25650.33310.088*
C13−0.0006 (7)0.2535 (5)0.12043 (15)0.0816 (10)
H13A0.16340.25760.10130.098*
H13B−0.06580.14320.12410.098*
C120.0397 (6)0.3448 (4)0.18997 (14)0.0730 (9)
H12A0.12410.45230.18720.088*
H12B−0.12490.35080.20770.088*
C3−0.7605 (6)−0.1462 (4)0.29574 (17)0.0721 (9)
H3−0.7867−0.20410.25300.086*
C15−0.2276 (8)0.2222 (6)0.00389 (18)0.1053 (13)
H15A−0.28380.11090.00760.126*
H15B−0.06790.2307−0.01760.126*
C14−0.1781 (8)0.3108 (5)0.07302 (17)0.0976 (12)
H14A−0.34010.30900.09300.117*
H14B−0.11060.42070.06910.117*
C17−0.4809 (10)0.1911 (7)−0.1089 (2)0.1358 (19)
H17A−0.53180.0792−0.10550.163*
H17B−0.32620.2022−0.13260.163*
C16−0.4209 (9)0.2749 (6)−0.04136 (19)0.1114 (14)
H16A−0.57840.2690−0.01890.134*
H16B−0.36210.3859−0.04520.134*
C18−0.6818 (9)0.2415 (7)−0.1504 (2)0.1289 (18)
H18A−0.70810.1765−0.19330.193*
H18B−0.63040.3505−0.15670.193*
H18C−0.83750.2302−0.12800.193*
U11U22U33U12U13U23
N20.0480 (11)0.0528 (12)0.0450 (11)0.0005 (10)0.0052 (9)0.0055 (9)
N10.0485 (11)0.0499 (12)0.0463 (12)0.0009 (10)0.0016 (9)0.0058 (9)
C90.0484 (14)0.0498 (15)0.0606 (16)0.0042 (12)0.0051 (12)0.0080 (12)
C80.0474 (13)0.0485 (14)0.0435 (13)0.0085 (11)0.0025 (10)0.0074 (11)
C100.0509 (15)0.0552 (16)0.0643 (17)−0.0023 (12)−0.0024 (13)0.0066 (13)
O10.0687 (12)0.0731 (13)0.0520 (11)−0.0099 (10)0.0110 (9)−0.0052 (10)
O20.0613 (12)0.0734 (14)0.0804 (14)−0.0074 (10)0.0208 (11)0.0104 (11)
S10.0525 (4)0.0583 (4)0.0445 (4)0.0010 (3)0.0008 (3)−0.0002 (3)
C70.0477 (14)0.0528 (15)0.0519 (15)0.0065 (12)0.0025 (11)0.0100 (12)
C10.0447 (13)0.0500 (14)0.0537 (15)0.0063 (11)0.0025 (11)0.0099 (12)
C110.0572 (15)0.0606 (16)0.0497 (15)0.0037 (13)0.0105 (12)0.0012 (13)
C20.0558 (16)0.0597 (17)0.0600 (17)−0.0015 (13)0.0014 (13)0.0091 (14)
C60.0517 (15)0.0645 (18)0.0671 (18)0.0083 (13)0.0082 (13)0.0153 (14)
C50.0541 (17)0.073 (2)0.089 (2)0.0048 (15)0.0147 (16)0.0263 (18)
C40.0518 (16)0.0626 (19)0.102 (3)−0.0080 (14)−0.0050 (17)0.0241 (18)
C130.088 (2)0.097 (3)0.0558 (18)0.011 (2)0.0007 (16)0.0037 (17)
C120.077 (2)0.086 (2)0.0543 (17)0.0132 (17)0.0032 (15)0.0036 (16)
C30.0703 (19)0.0631 (19)0.073 (2)−0.0051 (15)−0.0111 (16)0.0013 (15)
C150.116 (3)0.130 (4)0.063 (2)0.014 (3)−0.010 (2)0.004 (2)
C140.105 (3)0.122 (3)0.063 (2)0.018 (2)−0.0113 (19)0.009 (2)
C170.153 (4)0.185 (5)0.068 (3)0.049 (4)−0.022 (3)−0.004 (3)
C160.120 (3)0.137 (4)0.073 (2)0.021 (3)−0.012 (2)0.006 (2)
C180.129 (4)0.182 (5)0.076 (3)0.042 (4)−0.017 (3)0.003 (3)
N2—C91.380 (3)C4—C31.384 (5)
N2—C81.383 (3)C4—H40.9300
N2—C111.463 (3)C13—C141.492 (5)
N1—C81.297 (3)C13—C121.504 (4)
N1—C71.390 (3)C13—H13A0.9700
C9—O21.212 (3)C13—H13B0.9700
C9—C101.493 (4)C12—H12A0.9700
C8—S11.741 (2)C12—H12B0.9700
C10—S11.802 (3)C3—H30.9300
C10—H10A0.9700C15—C141.489 (5)
C10—H10B0.9700C15—C161.502 (5)
O1—C71.221 (3)C15—H15A0.9700
C7—C11.493 (4)C15—H15B0.9700
C1—C21.374 (4)C14—H14A0.9700
C1—C61.395 (4)C14—H14B0.9700
C11—C121.503 (4)C17—C161.451 (5)
C11—H11A0.9700C17—C181.477 (6)
C11—H11B0.9700C17—H17A0.9700
C2—C31.384 (4)C17—H17B0.9700
C2—H20.9300C16—H16A0.9700
C6—C51.371 (4)C16—H16B0.9700
C6—H60.9300C18—H18A0.9600
C5—C41.373 (5)C18—H18B0.9600
C5—H50.9300C18—H18C0.9600
C9—N2—C8116.6 (2)C12—C13—H13A108.5
C9—N2—C11120.8 (2)C14—C13—H13B108.5
C8—N2—C11122.6 (2)C12—C13—H13B108.5
C8—N1—C7116.6 (2)H13A—C13—H13B107.5
O2—C9—N2122.6 (3)C11—C12—C13113.0 (3)
O2—C9—C10126.0 (2)C11—C12—H12A109.0
N2—C9—C10111.4 (2)C13—C12—H12A109.0
N1—C8—N2119.3 (2)C11—C12—H12B109.0
N1—C8—S1128.94 (19)C13—C12—H12B109.0
N2—C8—S1111.79 (18)H12A—C12—H12B107.8
C9—C10—S1108.19 (18)C2—C3—C4119.8 (3)
C9—C10—H10A110.1C2—C3—H3120.1
S1—C10—H10A110.1C4—C3—H3120.1
C9—C10—H10B110.1C14—C15—C16116.1 (4)
S1—C10—H10B110.1C14—C15—H15A108.3
H10A—C10—H10B108.4C16—C15—H15A108.3
C8—S1—C1091.98 (12)C14—C15—H15B108.3
O1—C7—N1125.0 (2)C16—C15—H15B108.3
O1—C7—C1120.7 (2)H15A—C15—H15B107.4
N1—C7—C1114.3 (2)C15—C14—C13117.1 (4)
C2—C1—C6119.0 (2)C15—C14—H14A108.0
C2—C1—C7122.1 (2)C13—C14—H14A108.0
C6—C1—C7118.9 (2)C15—C14—H14B108.0
N2—C11—C12113.0 (2)C13—C14—H14B108.0
N2—C11—H11A109.0H14A—C14—H14B107.3
C12—C11—H11A109.0C16—C17—C18116.8 (4)
N2—C11—H11B109.0C16—C17—H17A108.1
C12—C11—H11B109.0C18—C17—H17A108.1
H11A—C11—H11B107.8C16—C17—H17B108.1
C1—C2—C3120.5 (3)C18—C17—H17B108.1
C1—C2—H2119.7H17A—C17—H17B107.3
C3—C2—H2119.7C17—C16—C15118.6 (4)
C5—C6—C1120.5 (3)C17—C16—H16A107.7
C5—C6—H6119.7C15—C16—H16A107.7
C1—C6—H6119.7C17—C16—H16B107.7
C6—C5—C4120.2 (3)C15—C16—H16B107.7
C6—C5—H5119.9H16A—C16—H16B107.1
C4—C5—H5119.9C17—C18—H18A109.5
C5—C4—C3119.9 (3)C17—C18—H18B109.5
C5—C4—H4120.0H18A—C18—H18B109.5
C3—C4—H4120.0C17—C18—H18C109.5
C14—C13—C12115.2 (3)H18A—C18—H18C109.5
C14—C13—H13A108.5H18B—C18—H18C109.5
D—H···AD—HH···AD···AD—H···A
C4—H4···O2i0.932.453.365 (4)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4⋯O2i0.932.453.365 (4)168

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Substituted thiazolidones as anticonvulsants.

Authors:  C Dwivedi; T K Gupta; S S Parmar
Journal:  J Med Chem       Date:  1972-05       Impact factor: 7.446

3.  Synthesis and preliminary evaluation of some pyrazine containing thiazolines and thiazolidinones as antimicrobial agents.

Authors:  Chandrakant G Bonde; Naresh J Gaikwad
Journal:  Bioorg Med Chem       Date:  2004-05-01       Impact factor: 3.641

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.