Literature DB >> 21589550

10H-Phenothia-zine 5-oxide.

Rui-Fang Jin1, Kai Yu, Shi-Yao Yang, Rong-Bin Huang.   

Abstract

In the title compound, C(12)H(9)NOS, the sulfoxide O atom is disordered over two sites with occupancies of 0.907 (4) and 0.093 (4). The dihedral angle betweeen the two aromatic rings is 18.40 (14)°. Different types of supramolecular interactions including inter-molecular N-H⋯O hydrogen bonds and π-π contacts [centroid-centroid distances = 3.9096 (16) and 4.1423 (16) Å] between the aromatic rings of symmetry-related mol-ecules are observed in the crystal structure.

Entities:  

Year:  2010        PMID: 21589550      PMCID: PMC3011726          DOI: 10.1107/S1600536810047914

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For N-aryl­phenothia­zine structures, see: Chu & Van der Helm (1974 ▶, 1975 ▶, 1976 ▶) and for N-aryl­phenothia­zine oxide structures, see: Chu et al. (1985 ▶), Wang et al. (2009 ▶). For a dioxophenothia­zinium cation co-crystallized with terephthalate trihydrate, see: Zhu et al. (2007 ▶).

Experimental

Crystal data

C12H9NOS M = 215.26 Monoclinic, a = 6.4482 (4) Å b = 7.6610 (5) Å c = 22.0956 (14) Å β = 110.466 (2)° V = 1022.62 (11) Å3 Z = 4 Mo Kα radiation μ = 0.29 mm−1 T = 297 K 0.50 × 0.50 × 0.40 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.871, T max = 0.895 7632 measured reflections 2361 independent reflections 1962 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.063 wR(F 2) = 0.175 S = 1.04 2361 reflections 146 parameters 6 restraints H-atom parameters constrained Δρmax = 0.44 e Å−3 Δρmin = −0.19 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2010) ▶; software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810047914/si2310sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810047914/si2310Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H9NOSF(000) = 448
Mr = 215.26Dx = 1.398 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3079 reflections
a = 6.4482 (4) Åθ = 2.7–27.3°
b = 7.6610 (5) ŵ = 0.28 mm1
c = 22.0956 (14) ÅT = 297 K
β = 110.466 (2)°Block, brown
V = 1022.62 (11) Å30.50 × 0.50 × 0.40 mm
Z = 4
Bruker APEX area-detector diffractometer2361 independent reflections
Radiation source: fine-focus sealed tube1962 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scanθmax = 28.6°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −8→8
Tmin = 0.871, Tmax = 0.895k = −9→9
7632 measured reflectionsl = −28→29
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.175H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.098P)2 + 0.4384P] where P = (Fo2 + 2Fc2)/3
2361 reflections(Δ/σ)max < 0.001
146 parametersΔρmax = 0.44 e Å3
6 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
S50.42382 (10)0.16598 (9)0.58407 (3)0.0511 (3)
O50.5476 (3)0.3348 (3)0.60011 (10)0.0515 (6)0.907 (4)
O5'0.537 (2)0.0431 (17)0.5773 (6)0.024 (4)0.093 (4)
N10−0.0212 (3)0.2763 (3)0.59516 (10)0.0465 (5)
H10A−0.12560.33630.60090.056*
C1−0.1959 (5)0.3230 (3)0.48155 (14)0.0563 (7)
H1A−0.31970.36770.48850.068*
C2−0.1951 (6)0.3105 (4)0.42027 (16)0.0695 (9)
H2A−0.31820.34720.38590.083*
C3−0.0141 (7)0.2438 (4)0.40843 (15)0.0746 (10)
H3A−0.01690.23320.36620.090*
C4A0.1721 (4)0.2076 (3)0.52193 (12)0.0459 (6)
C40.1689 (6)0.1936 (4)0.45877 (15)0.0624 (8)
H4A0.29170.15000.45090.075*
C5A0.3231 (4)0.1236 (3)0.64649 (12)0.0458 (6)
C60.4605 (5)0.0291 (4)0.69942 (15)0.0621 (8)
H6A0.5904−0.02020.69790.075*
C70.4058 (6)0.0086 (4)0.75312 (16)0.0750 (9)
H7A0.4974−0.05540.78800.090*
C80.2155 (7)0.0822 (4)0.75575 (15)0.0725 (9)
H8A0.18070.06990.79300.087*
C9A0.1255 (4)0.1936 (3)0.64756 (12)0.0433 (5)
C90.0752 (5)0.1739 (4)0.70411 (15)0.0592 (7)
H9A−0.05330.22320.70670.071*
C10A−0.0122 (4)0.2694 (3)0.53439 (12)0.0429 (5)
U11U22U33U12U13U23
S50.0328 (4)0.0552 (4)0.0649 (5)0.0046 (2)0.0165 (3)−0.0057 (3)
O50.0265 (9)0.0631 (13)0.0647 (13)−0.0072 (8)0.0156 (9)−0.0056 (9)
O5'0.024 (4)0.025 (4)0.025 (4)0.0011 (10)0.0089 (16)−0.0008 (10)
N100.0303 (9)0.0531 (12)0.0573 (13)0.0056 (9)0.0166 (9)0.0031 (10)
C10.0421 (14)0.0503 (14)0.0633 (17)−0.0057 (11)0.0018 (12)0.0081 (12)
C20.067 (2)0.0634 (18)0.0589 (18)−0.0144 (15)−0.0016 (15)0.0080 (14)
C30.096 (3)0.073 (2)0.0481 (17)−0.026 (2)0.0172 (17)−0.0066 (15)
C4A0.0401 (13)0.0447 (12)0.0511 (14)−0.0055 (10)0.0139 (11)−0.0057 (10)
C40.0675 (19)0.0626 (17)0.0614 (17)−0.0154 (14)0.0279 (15)−0.0152 (14)
C5A0.0364 (12)0.0416 (12)0.0532 (14)−0.0010 (10)0.0077 (10)−0.0025 (10)
C60.0524 (16)0.0517 (15)0.0674 (18)0.0074 (12)0.0024 (13)0.0060 (13)
C70.080 (2)0.0612 (19)0.063 (2)−0.0008 (17)−0.0001 (17)0.0118 (15)
C80.095 (3)0.0701 (19)0.0504 (17)−0.0125 (18)0.0227 (17)0.0062 (14)
C9A0.0352 (12)0.0415 (12)0.0502 (14)−0.0050 (9)0.0113 (10)−0.0005 (10)
C90.0559 (17)0.0644 (17)0.0630 (17)−0.0101 (13)0.0278 (14)−0.0038 (13)
C10A0.0333 (11)0.0391 (11)0.0526 (14)−0.0056 (9)0.0101 (10)0.0009 (10)
S5—O5'1.233 (13)C4A—C10A1.393 (3)
S5—O51.496 (2)C4A—C41.393 (4)
S5—C5A1.748 (3)C4—H4A0.9300
S5—C4A1.750 (3)C5A—C9A1.390 (3)
N10—C10A1.365 (3)C5A—C61.397 (4)
N10—C9A1.368 (3)C6—C71.360 (5)
N10—H10A0.8600C6—H6A0.9300
C1—C21.359 (5)C7—C81.370 (5)
C1—C10A1.403 (3)C7—H7A0.9300
C1—H1A0.9300C8—C91.376 (5)
C2—C31.380 (5)C8—H8A0.9300
C2—H2A0.9300C9A—C91.404 (4)
C3—C41.364 (5)C9—H9A0.9300
C3—H3A0.9300
O5'—S5—O5113.5 (6)C4A—C4—H4A120.0
O5'—S5—C5A110.7 (6)C9A—C5A—C6120.1 (3)
O5—S5—C5A106.75 (12)C9A—C5A—S5122.5 (2)
O5'—S5—C4A118.1 (6)C6—C5A—S5117.0 (2)
O5—S5—C4A107.46 (12)C7—C6—C5A120.5 (3)
C5A—S5—C4A98.86 (12)C7—C6—H6A119.7
C10A—N10—C9A124.1 (2)C5A—C6—H6A119.7
C10A—N10—H10A118.0C6—C7—C8119.9 (3)
C9A—N10—H10A118.0C6—C7—H7A120.0
C2—C1—C10A120.8 (3)C8—C7—H7A120.0
C2—C1—H1A119.6C7—C8—C9120.9 (3)
C10A—C1—H1A119.6C7—C8—H8A119.5
C1—C2—C3120.8 (3)C9—C8—H8A119.5
C1—C2—H2A119.6N10—C9A—C5A122.1 (2)
C3—C2—H2A119.6N10—C9A—C9119.8 (2)
C4—C3—C2119.9 (3)C5A—C9A—C9118.2 (2)
C4—C3—H3A120.1C8—C9—C9A120.2 (3)
C2—C3—H3A120.1C8—C9—H9A119.9
C10A—C4A—C4120.6 (3)C9A—C9—H9A119.9
C10A—C4A—S5121.9 (2)N10—C10A—C4A122.7 (2)
C4—C4A—S5117.2 (2)N10—C10A—C1119.6 (2)
C3—C4—C4A120.1 (3)C4A—C10A—C1117.7 (3)
C3—C4—H4A120.0
C10A—C1—C2—C30.3 (4)C5A—C6—C7—C8−0.6 (5)
C1—C2—C3—C4−1.6 (5)C6—C7—C8—C91.5 (5)
O5'—S5—C4A—C10A145.5 (7)C10A—N10—C9A—C5A13.3 (4)
O5—S5—C4A—C10A−84.5 (2)C10A—N10—C9A—C9−165.2 (2)
C5A—S5—C4A—C10A26.3 (2)C6—C5A—C9A—N10−175.3 (2)
O5'—S5—C4A—C4−40.9 (7)S5—C5A—C9A—N1011.0 (3)
O5—S5—C4A—C489.1 (2)C6—C5A—C9A—C93.2 (4)
C5A—S5—C4A—C4−160.1 (2)S5—C5A—C9A—C9−170.48 (19)
C2—C3—C4—C4A0.8 (5)C7—C8—C9—C9A0.0 (5)
C10A—C4A—C4—C31.3 (4)N10—C9A—C9—C8176.2 (3)
S5—C4A—C4—C3−172.4 (2)C5A—C9A—C9—C8−2.3 (4)
O5'—S5—C5A—C9A−151.4 (7)C9A—N10—C10A—C4A−13.6 (4)
O5—S5—C5A—C9A84.6 (2)C9A—N10—C10A—C1165.2 (2)
C4A—S5—C5A—C9A−26.7 (2)C4—C4A—C10A—N10176.3 (2)
O5'—S5—C5A—C634.7 (7)S5—C4A—C10A—N10−10.4 (3)
O5—S5—C5A—C6−89.3 (2)C4—C4A—C10A—C1−2.5 (4)
C4A—S5—C5A—C6159.4 (2)S5—C4A—C10A—C1170.87 (18)
C9A—C5A—C6—C7−1.8 (4)C2—C1—C10A—N10−177.1 (2)
S5—C5A—C6—C7172.2 (2)C2—C1—C10A—C4A1.7 (4)
D—H···AD—HH···AD···AD—H···A
N10—H10A···O5i0.862.102.856 (3)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N10—H10A⋯O5i0.862.102.856 (3)146

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  10-Acetyl-10H-phenothia-zine 5-oxide.

Authors:  Qiang Wang; Lei Yang; Zhouqing Xu; Yanchun Sun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-25
  2 in total
  1 in total

1.  10-(6-Hy-droxy-hexa-2,4-diyn-1-yl)-10H-phenothia-zine 5-oxide.

Authors:  Hideyuki Tabata; Tsunehisa Okuno
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-27
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.