Literature DB >> 21589514

Ethyl 3-(3-oxo-3,4-dihydro-quinoxalin-2-yl)propano-ate.

Waqar Nasir, Munawar Ali Munawar, Ahmad Adnan, Saeed Ahmad, Mohammad Akbar.   

Abstract

In the title compound, C(13)H(14)N(2)O(3), the fused ring system is almost planar (r.m.s. deviation = 0.015 Å). The r.m.s. deviation for all the non-H atoms of the mol-ecule is 0.065Å. In the crystal, N-H⋯O and C-H⋯O hydrogen bonds generate polymeric chains along the b axis containing alternating centrsymmetric R(2) (2)(8) and R(2) (2)(20) loops.

Entities:  

Year:  2010        PMID: 21589514      PMCID: PMC3011385          DOI: 10.1107/S1600536810047094

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Taylor et al. (1965 ▶). For the biological activity of benzopyrazines, see: Sona et al. (1998 ▶); Cai et al. (1997 ▶); Toshima et al. (2003 ▶); Benbow et al. (2007 ▶); Sarges et al. (1990 ▶); Smits et al. (2008 ▶); Tandon et al. (2006 ▶).

Experimental

Crystal data

C13H14N2O3 M = 246.26 Monoclinic, a = 8.3138 (6) Å b = 13.6868 (8) Å c = 10.8189 (8) Å β = 102.002 (3)° V = 1204.16 (14) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.37 × 0.29 × 0.23 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.965, T max = 0.978 11123 measured reflections 2938 independent reflections 1370 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.216 S = 0.96 2938 reflections 167 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.44 e Å−3 Δρmin = −0.30 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810047094/hb5740sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810047094/hb5740Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H14N2O3F(000) = 520
Mr = 246.26Dx = 1.358 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1697 reflections
a = 8.3138 (6) Åθ = 2.8–24.6°
b = 13.6868 (8) ŵ = 0.10 mm1
c = 10.8189 (8) ÅT = 296 K
β = 102.002 (3)°Cut needle, colourless
V = 1204.16 (14) Å30.37 × 0.29 × 0.23 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer2938 independent reflections
Radiation source: fine-focus sealed tube1370 reflections with I > 2σ(I)
graphiteRint = 0.060
φ and ω scansθmax = 28.3°, θmin = 3.5°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −11→11
Tmin = 0.965, Tmax = 0.978k = −11→18
11123 measured reflectionsl = −14→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.068Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.216H atoms treated by a mixture of independent and constrained refinement
S = 0.96w = 1/[σ2(Fo2) + (0.0982P)2 + 0.5331P] where P = (Fo2 + 2Fc2)/3
2938 reflections(Δ/σ)max < 0.001
167 parametersΔρmax = 0.44 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N20.5708 (3)0.81339 (16)0.0220 (2)0.0448 (6)
C60.3369 (3)0.70659 (19)−0.0524 (3)0.0427 (7)
C10.4043 (3)0.79969 (19)−0.0334 (3)0.0436 (7)
C80.6615 (3)0.73747 (19)0.0532 (3)0.0423 (7)
C50.1719 (4)0.6942 (2)−0.1080 (3)0.0534 (8)
H50.12710.6318−0.11990.064*
N10.4382 (3)0.62700 (17)−0.0166 (2)0.0478 (7)
O31.1357 (2)0.94521 (16)0.1990 (3)0.0763 (8)
C70.5997 (3)0.63615 (19)0.0353 (3)0.0448 (7)
C20.3048 (3)0.8807 (2)−0.0717 (3)0.0518 (8)
H20.34870.9433−0.06000.062*
C90.8402 (3)0.7474 (2)0.1117 (3)0.0485 (8)
H9A0.90340.71370.05890.058*
H9B0.86130.71510.19330.058*
C100.9003 (3)0.8516 (2)0.1298 (3)0.0503 (8)
H10A0.88630.88340.04810.060*
H10B0.83480.88680.17970.060*
O10.6900 (2)0.56381 (14)0.0636 (2)0.0593 (7)
C111.0773 (4)0.8557 (2)0.1947 (3)0.0563 (9)
O21.1589 (3)0.78799 (19)0.2404 (3)0.0934 (10)
C30.1417 (4)0.8677 (2)−0.1268 (3)0.0591 (9)
H30.07540.9219−0.15180.071*
C121.3079 (4)0.9554 (3)0.2601 (4)0.0911 (14)
H12A1.32710.92490.34280.109*
H12B1.37600.92260.21020.109*
C40.0752 (4)0.7746 (2)−0.1455 (3)0.0577 (9)
H4−0.03510.7667−0.18340.069*
C131.3500 (6)1.0526 (4)0.2726 (6)0.131 (2)
H13C1.34101.08110.19040.196*
H13A1.46111.05870.31930.196*
H13B1.27731.08580.31690.196*
H1N0.394 (6)0.562 (5)−0.033 (5)0.157*
U11U22U33U12U13U23
N20.0344 (13)0.0382 (13)0.0576 (16)−0.0021 (10)−0.0004 (11)0.0004 (11)
C60.0340 (15)0.0374 (15)0.0542 (18)0.0006 (12)0.0034 (13)0.0025 (13)
C10.0362 (16)0.0384 (16)0.0526 (18)0.0021 (12)0.0010 (13)0.0010 (13)
C80.0357 (15)0.0362 (15)0.0507 (17)0.0023 (11)−0.0009 (13)0.0001 (13)
C50.0374 (17)0.0458 (18)0.073 (2)−0.0046 (13)0.0014 (15)−0.0021 (15)
N10.0332 (13)0.0357 (13)0.0680 (17)−0.0008 (10)−0.0049 (11)0.0009 (11)
O30.0340 (12)0.0536 (14)0.127 (2)−0.0050 (10)−0.0155 (12)−0.0091 (14)
C70.0396 (16)0.0347 (15)0.0564 (19)−0.0002 (12)0.0015 (14)−0.0025 (13)
C20.0428 (18)0.0371 (16)0.071 (2)0.0018 (12)0.0008 (15)0.0003 (14)
C90.0339 (16)0.0423 (16)0.065 (2)0.0019 (12)−0.0004 (14)−0.0012 (14)
C100.0336 (16)0.0424 (17)0.069 (2)0.0006 (12)−0.0035 (14)0.0018 (15)
O10.0428 (12)0.0353 (11)0.0905 (17)0.0076 (9)−0.0075 (11)−0.0010 (10)
C110.0356 (16)0.052 (2)0.074 (2)0.0011 (14)−0.0057 (15)−0.0044 (16)
O20.0467 (15)0.0687 (17)0.143 (3)0.0075 (12)−0.0295 (15)0.0194 (16)
C30.0420 (18)0.0458 (18)0.083 (2)0.0102 (14)−0.0017 (16)0.0066 (16)
C120.038 (2)0.081 (3)0.138 (4)−0.0081 (18)−0.020 (2)−0.014 (3)
C40.0324 (16)0.055 (2)0.081 (2)0.0031 (13)0.0010 (15)0.0037 (17)
C130.078 (3)0.088 (4)0.207 (6)−0.031 (3)−0.015 (3)−0.020 (4)
N2—C81.287 (3)C9—C101.511 (4)
N2—C11.402 (3)C9—H9A0.9700
C6—N11.382 (3)C9—H9B0.9700
C6—C51.389 (4)C10—C111.494 (4)
C6—C11.390 (4)C10—H10A0.9700
C1—C21.394 (4)C10—H10B0.9700
C8—C71.478 (4)C11—O21.193 (4)
C8—C91.495 (4)C3—C41.387 (4)
C5—C41.373 (4)C3—H30.9300
C5—H50.9300C12—C131.375 (6)
N1—C71.349 (3)C12—H12A0.9700
N1—H1N0.96 (6)C12—H12B0.9700
O3—C111.316 (4)C4—H40.9300
O3—C121.453 (4)C13—H13C0.9600
C7—O11.242 (3)C13—H13A0.9600
C2—C31.375 (4)C13—H13B0.9600
C2—H20.9300
C8—N2—C1118.5 (2)H9A—C9—H9B107.6
N1—C6—C5121.0 (2)C11—C10—C9111.3 (2)
N1—C6—C1118.5 (2)C11—C10—H10A109.4
C5—C6—C1120.5 (3)C9—C10—H10A109.4
C6—C1—C2119.3 (3)C11—C10—H10B109.4
C6—C1—N2121.2 (2)C9—C10—H10B109.4
C2—C1—N2119.5 (2)H10A—C10—H10B108.0
N2—C8—C7123.6 (3)O2—C11—O3122.4 (3)
N2—C8—C9121.0 (2)O2—C11—C10125.8 (3)
C7—C8—C9115.4 (2)O3—C11—C10111.8 (3)
C4—C5—C6119.7 (3)C2—C3—C4120.6 (3)
C4—C5—H5120.2C2—C3—H3119.7
C6—C5—H5120.2C4—C3—H3119.7
C7—N1—C6122.6 (2)C13—C12—O3110.1 (4)
C7—N1—H1N118 (3)C13—C12—H12A109.6
C6—N1—H1N119 (3)O3—C12—H12A109.6
C11—O3—C12115.2 (3)C13—C12—H12B109.6
O1—C7—N1121.8 (2)O3—C12—H12B109.6
O1—C7—C8122.7 (3)H12A—C12—H12B108.2
N1—C7—C8115.5 (2)C5—C4—C3120.1 (3)
C3—C2—C1119.8 (3)C5—C4—H4119.9
C3—C2—H2120.1C3—C4—H4119.9
C1—C2—H2120.1C12—C13—H13C109.5
C8—C9—C10114.4 (2)C12—C13—H13A109.5
C8—C9—H9A108.7H13C—C13—H13A109.5
C10—C9—H9A108.7C12—C13—H13B109.5
C8—C9—H9B108.7H13C—C13—H13B109.5
C10—C9—H9B108.7H13A—C13—H13B109.5
N1—C6—C1—C2178.5 (3)N2—C8—C7—N1−0.2 (4)
C5—C6—C1—C2−0.4 (5)C9—C8—C7—N1179.5 (3)
N1—C6—C1—N2−0.8 (4)C6—C1—C2—C30.4 (5)
C5—C6—C1—N2−179.7 (3)N2—C1—C2—C3179.6 (3)
C8—N2—C1—C61.3 (4)N2—C8—C9—C100.1 (4)
C8—N2—C1—C2−177.9 (3)C7—C8—C9—C10−179.6 (3)
C1—N2—C8—C7−0.8 (4)C8—C9—C10—C11177.0 (3)
C1—N2—C8—C9179.5 (3)C12—O3—C11—O21.7 (5)
N1—C6—C5—C4−178.4 (3)C12—O3—C11—C10−179.6 (3)
C1—C6—C5—C40.5 (5)C9—C10—C11—O2−8.1 (5)
C5—C6—N1—C7178.6 (3)C9—C10—C11—O3173.2 (3)
C1—C6—N1—C7−0.3 (4)C1—C2—C3—C4−0.4 (5)
C6—N1—C7—O1−177.9 (3)C11—O3—C12—C13−172.8 (4)
C6—N1—C7—C80.8 (4)C6—C5—C4—C3−0.5 (5)
N2—C8—C7—O1178.5 (3)C2—C3—C4—C50.5 (5)
C9—C8—C7—O1−1.8 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O1i0.96 (6)1.87 (6)2.827 (3)179 (5)
C3—H3···O3ii0.932.513.426 (4)170
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O1i0.96 (6)1.87 (6)2.827 (3)179 (5)
C3—H3⋯O3ii0.932.513.426 (4)170

Symmetry codes: (i) ; (ii) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Design, synthesis, and biological evaluation of 1,2,3-trisubstituted-1,4-dihydrobenzo[g]quinoxaline-5,10-diones and related compounds as antifungal and antibacterial agents.

Authors:  Vishnu K Tandon; Dharmendra B Yadav; Hardesh K Maurya; Ashok K Chaturvedi; Praveen K Shukla
Journal:  Bioorg Med Chem       Date:  2006-06-27       Impact factor: 3.641

3.  5-(N-oxyaza)-7-substituted-1,4-dihydroquinoxaline-2,3-diones: novel, systemically active and broad spectrum antagonists for NMDA/glycine, AMPA, and kainate receptors.

Authors:  S X Cai; J C Huang; S A Espitia; M Tran; V I Ilyin; J E Hawkinson; R M Woodward; E Weber; J F Keana
Journal:  J Med Chem       Date:  1997-10-24       Impact factor: 7.446

4.  Fragment based design of new H4 receptor-ligands with anti-inflammatory properties in vivo.

Authors:  Rogier A Smits; Herman D Lim; Agnes Hanzer; Obbe P Zuiderveld; Elena Guaita; Maristella Adami; Gabriella Coruzzi; Rob Leurs; Iwan J P de Esch
Journal:  J Med Chem       Date:  2008-03-22       Impact factor: 7.446

5.  Synthesis of substituted 2-ethoxycarbonyl- and 2-carboxyquinoxalin-3-ones for evaluation of antimicrobial and anticancer activity.

Authors:  P Sanna; A Carta; M Loriga; S Zanetti; L Sechi
Journal:  Farmaco       Date:  1998-07-30

6.  4-Amino[1,2,4]triazolo[4,3-a]quinoxalines. A novel class of potent adenosine receptor antagonists and potential rapid-onset antidepressants.

Authors:  R Sarges; H R Howard; R G Browne; L A Lebel; P A Seymour; B K Koe
Journal:  J Med Chem       Date:  1990-08       Impact factor: 7.446

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.