Literature DB >> 21589494

9-(2,4-Dichloro-phen-yl)-3,3,6,6-tetra-methyl-3,4,5,6-tetra-hydro-9H-xanthene-1,8(2H,7H)-dione.

Hao Shi1.   

Abstract

The title compound, C(23)H(24)Cl(2)O(3), was synthesized by reaction of 2,4-dichloro-benzaldehyde and 5,5-dimethyl-cyclo-hexane-1,3-dione in ethyl-ene glycol. The central ring of the xanthene moiety is almost planar (with an r.m.s. deviation of 0.0268 Å from the least-squares plane) while the two outer rings, in a cis arrangement, display envelope conformations. The ring of the 2,4-dichloro-phenyl substituent is nearly perpendicular [85.89 (4)°] to the xanthene ring system.

Entities:  

Year:  2010        PMID: 21589494      PMCID: PMC3011743          DOI: 10.1107/S1600536810046702

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Odabaşoğlu et al. (2008 ▶); Bigdeli et al. (2007 ▶); Tu et al. (2002 ▶, 2004 ▶); Jeyakanthan et al. (1999 ▶); Li et al. (2005 ▶); Shi et al. (1997 ▶). For applications of xanthene derivatives, see: Poupelin et al. (1978 ▶); Lambert et al. (1997 ▶); Menchen et al. (2003 ▶); Banerjee & Mukherjee (1981 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C23H24Cl2O3 M = 419.32 Monoclinic, a = 9.8154 (10) Å b = 19.833 (2) Å c = 11.4441 (11) Å β = 111.873 (2)° V = 2067.4 (4) Å3 Z = 4 Mo Kα radiation μ = 0.34 mm−1 T = 296 K 0.20 × 0.10 × 0.10 mm

Data collection

Bruker APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1997 ▶) T min = 0.936, T max = 0.967 13137 measured reflections 4961 independent reflections 3331 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.124 S = 1.02 4961 reflections 257 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.55 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810046702/dn2622sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810046702/dn2622Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H24Cl2O3F(000) = 880
Mr = 419.32Dx = 1.347 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3489 reflections
a = 9.8154 (10) Åθ = 2.2–27.1°
b = 19.833 (2) ŵ = 0.34 mm1
c = 11.4441 (11) ÅT = 296 K
β = 111.873 (2)°Prism, colorless
V = 2067.4 (4) Å30.20 × 0.10 × 0.10 mm
Z = 4
Bruker APEX CCD diffractometer4961 independent reflections
Radiation source: fine-focus sealed tube3331 reflections with I > 2σ(I)
graphiteRint = 0.027
ω scansθmax = 28.2°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 1997)h = −13→11
Tmin = 0.936, Tmax = 0.967k = −25→26
13137 measured reflectionsl = −13→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.124H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0573P)2 + 0.4531P] where P = (Fo2 + 2Fc2)/3
4961 reflections(Δ/σ)max < 0.001
257 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.55 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.48123 (7)0.49352 (3)0.81227 (5)0.05835 (18)
Cl20.17633 (9)0.68975 (4)0.92235 (7)0.0867 (3)
O10.37359 (14)0.63325 (7)0.31501 (11)0.0429 (3)
O20.69826 (15)0.60451 (8)0.73455 (13)0.0535 (4)
O30.19747 (16)0.47392 (7)0.52949 (13)0.0495 (4)
C10.6678 (2)0.63036 (10)0.63116 (18)0.0396 (4)
C20.7753 (2)0.67506 (10)0.60270 (19)0.0437 (5)
H2A0.84110.64680.57850.052*
H2B0.83410.69860.67930.052*
C30.7073 (2)0.72708 (10)0.49949 (18)0.0399 (4)
C40.6005 (2)0.68988 (11)0.38461 (18)0.0447 (5)
H4A0.54260.72270.32330.054*
H4B0.65610.66370.34610.054*
C50.1471 (2)0.57908 (11)0.20690 (17)0.0450 (5)
H5A0.17010.54460.15690.054*
H5B0.12960.62090.15980.054*
C60.0085 (2)0.55903 (10)0.22869 (18)0.0409 (4)
C70.0469 (2)0.49772 (10)0.31638 (19)0.0426 (4)
H7A−0.03650.48710.33900.051*
H7B0.06360.45940.27080.051*
C80.1799 (2)0.50728 (9)0.43512 (18)0.0369 (4)
C90.42019 (19)0.56963 (9)0.55622 (16)0.0336 (4)
H90.46990.52680.58810.040*
C100.52669 (18)0.61624 (9)0.52976 (16)0.0345 (4)
C110.50031 (19)0.64432 (9)0.41722 (17)0.0368 (4)
C120.27441 (19)0.58782 (9)0.32733 (17)0.0363 (4)
C130.29182 (19)0.55638 (9)0.43501 (17)0.0342 (4)
C14−0.0441 (2)0.61645 (11)0.2899 (2)0.0544 (6)
H14A0.02860.62560.37170.082*
H14B−0.13460.60380.29800.082*
H14C−0.05950.65610.23850.082*
C15−0.1116 (2)0.54084 (13)0.1031 (2)0.0561 (6)
H15A−0.12380.57710.04440.084*
H15B−0.20220.53350.11510.084*
H15C−0.08450.50050.07070.084*
C160.6252 (2)0.78085 (11)0.5432 (2)0.0560 (6)
H16A0.58590.81400.47820.084*
H16B0.69170.80210.61810.084*
H16C0.54650.76010.56080.084*
C170.8269 (2)0.76069 (11)0.4648 (2)0.0512 (5)
H17A0.87680.72720.43510.077*
H17B0.89580.78260.53770.077*
H17C0.78330.79350.39980.077*
C180.36693 (19)0.59939 (9)0.65453 (16)0.0342 (4)
C190.3866 (2)0.56903 (10)0.76900 (17)0.0384 (4)
C200.3308 (2)0.59704 (11)0.85255 (18)0.0453 (5)
H200.34600.57630.92930.054*
C210.2526 (2)0.65597 (11)0.8201 (2)0.0492 (5)
C220.2324 (2)0.68823 (11)0.7101 (2)0.0521 (5)
H220.18100.72870.69030.063*
C230.2899 (2)0.65966 (10)0.62823 (19)0.0441 (5)
H230.27650.68160.55290.053*
U11U22U33U12U13U23
Cl10.0722 (4)0.0568 (3)0.0467 (3)0.0159 (3)0.0229 (3)0.0185 (2)
Cl20.1098 (6)0.0919 (5)0.0885 (5)−0.0067 (4)0.0717 (5)−0.0323 (4)
O10.0408 (7)0.0571 (8)0.0295 (7)−0.0146 (6)0.0117 (6)0.0025 (6)
O20.0466 (8)0.0693 (10)0.0385 (8)−0.0043 (7)0.0090 (6)0.0099 (7)
O30.0550 (8)0.0487 (8)0.0469 (9)−0.0060 (7)0.0217 (7)0.0081 (7)
C10.0378 (10)0.0441 (11)0.0370 (10)0.0025 (8)0.0139 (8)−0.0023 (8)
C20.0358 (10)0.0477 (11)0.0460 (12)−0.0039 (8)0.0136 (9)−0.0014 (9)
C30.0368 (9)0.0430 (10)0.0417 (11)−0.0042 (8)0.0165 (8)−0.0025 (8)
C40.0445 (11)0.0556 (12)0.0362 (10)−0.0118 (9)0.0178 (9)0.0004 (9)
C50.0427 (11)0.0608 (13)0.0305 (10)−0.0103 (9)0.0125 (8)−0.0009 (9)
C60.0366 (9)0.0465 (11)0.0399 (10)−0.0028 (8)0.0145 (8)0.0024 (8)
C70.0381 (10)0.0425 (11)0.0492 (12)−0.0048 (8)0.0187 (9)0.0006 (9)
C80.0402 (10)0.0335 (9)0.0424 (11)0.0010 (8)0.0215 (8)−0.0003 (8)
C90.0362 (9)0.0351 (9)0.0323 (9)0.0024 (7)0.0160 (8)0.0009 (7)
C100.0331 (9)0.0401 (10)0.0320 (9)0.0000 (7)0.0143 (8)−0.0012 (7)
C110.0340 (9)0.0450 (10)0.0324 (9)−0.0049 (8)0.0136 (8)−0.0034 (8)
C120.0358 (9)0.0415 (10)0.0352 (10)−0.0054 (8)0.0174 (8)−0.0026 (8)
C130.0352 (9)0.0366 (9)0.0341 (9)0.0000 (7)0.0167 (8)−0.0017 (7)
C140.0524 (12)0.0540 (13)0.0575 (14)0.0137 (10)0.0210 (11)0.0055 (10)
C150.0432 (11)0.0692 (15)0.0485 (13)−0.0118 (11)0.0084 (10)0.0017 (11)
C160.0478 (12)0.0498 (12)0.0728 (16)−0.0003 (10)0.0252 (11)−0.0086 (11)
C170.0466 (11)0.0529 (12)0.0578 (14)−0.0114 (10)0.0236 (10)−0.0036 (10)
C180.0356 (9)0.0382 (10)0.0303 (9)−0.0028 (7)0.0139 (7)−0.0010 (7)
C190.0401 (10)0.0422 (10)0.0318 (9)−0.0035 (8)0.0120 (8)0.0005 (8)
C200.0506 (11)0.0550 (12)0.0338 (10)−0.0132 (10)0.0198 (9)−0.0049 (9)
C210.0542 (12)0.0544 (13)0.0502 (13)−0.0108 (10)0.0322 (11)−0.0170 (10)
C220.0553 (12)0.0459 (12)0.0600 (14)0.0058 (10)0.0270 (11)−0.0067 (10)
C230.0521 (11)0.0431 (11)0.0396 (11)0.0056 (9)0.0202 (9)0.0033 (8)
Cl1—C191.734 (2)C9—C101.508 (2)
Cl2—C211.741 (2)C9—C131.509 (2)
O1—C111.371 (2)C9—C181.525 (2)
O1—C121.372 (2)C9—H90.9800
O2—C11.220 (2)C10—C111.337 (2)
O3—C81.223 (2)C12—C131.334 (2)
C1—C101.465 (3)C14—H14A0.9600
C1—C21.504 (3)C14—H14B0.9600
C2—C31.522 (3)C14—H14C0.9600
C2—H2A0.9700C15—H15A0.9600
C2—H2B0.9700C15—H15B0.9600
C3—C171.526 (3)C15—H15C0.9600
C3—C161.528 (3)C16—H16A0.9600
C3—C41.531 (3)C16—H16B0.9600
C4—C111.482 (3)C16—H16C0.9600
C4—H4A0.9700C17—H17A0.9600
C4—H4B0.9700C17—H17B0.9600
C5—C121.486 (3)C17—H17C0.9600
C5—C61.525 (3)C18—C231.386 (3)
C5—H5A0.9700C18—C191.388 (2)
C5—H5B0.9700C19—C201.384 (3)
C6—C151.524 (3)C20—C211.371 (3)
C6—C141.524 (3)C20—H200.9300
C6—C71.531 (3)C21—C221.360 (3)
C7—C81.505 (3)C22—C231.383 (3)
C7—H7A0.9700C22—H220.9300
C7—H7B0.9700C23—H230.9300
C8—C131.468 (2)
C11—O1—C12118.07 (14)C10—C11—O1122.95 (16)
O2—C1—C10120.39 (18)C10—C11—C4126.02 (16)
O2—C1—C2121.29 (17)O1—C11—C4111.03 (15)
C10—C1—C2118.28 (17)C13—C12—O1123.39 (16)
C1—C2—C3115.27 (15)C13—C12—C5125.20 (17)
C1—C2—H2A108.5O1—C12—C5111.40 (15)
C3—C2—H2A108.5C12—C13—C8118.18 (16)
C1—C2—H2B108.5C12—C13—C9122.91 (16)
C3—C2—H2B108.5C8—C13—C9118.91 (15)
H2A—C2—H2B107.5C6—C14—H14A109.5
C2—C3—C17109.89 (16)C6—C14—H14B109.5
C2—C3—C16110.57 (17)H14A—C14—H14B109.5
C17—C3—C16109.31 (17)C6—C14—H14C109.5
C2—C3—C4107.56 (16)H14A—C14—H14C109.5
C17—C3—C4109.51 (16)H14B—C14—H14C109.5
C16—C3—C4109.97 (16)C6—C15—H15A109.5
C11—C4—C3112.57 (16)C6—C15—H15B109.5
C11—C4—H4A109.1H15A—C15—H15B109.5
C3—C4—H4A109.1C6—C15—H15C109.5
C11—C4—H4B109.1H15A—C15—H15C109.5
C3—C4—H4B109.1H15B—C15—H15C109.5
H4A—C4—H4B107.8C3—C16—H16A109.5
C12—C5—C6111.83 (15)C3—C16—H16B109.5
C12—C5—H5A109.2H16A—C16—H16B109.5
C6—C5—H5A109.2C3—C16—H16C109.5
C12—C5—H5B109.2H16A—C16—H16C109.5
C6—C5—H5B109.2H16B—C16—H16C109.5
H5A—C5—H5B107.9C3—C17—H17A109.5
C15—C6—C14109.56 (17)C3—C17—H17B109.5
C15—C6—C5109.34 (16)H17A—C17—H17B109.5
C14—C6—C5110.85 (17)C3—C17—H17C109.5
C15—C6—C7110.20 (17)H17A—C17—H17C109.5
C14—C6—C7109.58 (17)H17B—C17—H17C109.5
C5—C6—C7107.28 (16)C23—C18—C19116.87 (17)
C8—C7—C6114.26 (16)C23—C18—C9118.85 (16)
C8—C7—H7A108.7C19—C18—C9124.25 (16)
C6—C7—H7A108.7C20—C19—C18121.75 (18)
C8—C7—H7B108.7C20—C19—Cl1117.22 (15)
C6—C7—H7B108.7C18—C19—Cl1121.03 (15)
H7A—C7—H7B107.6C21—C20—C19118.76 (19)
O3—C8—C13120.01 (17)C21—C20—H20120.6
O3—C8—C7121.26 (17)C19—C20—H20120.6
C13—C8—C7118.70 (16)C22—C21—C20121.69 (19)
C10—C9—C13109.02 (14)C22—C21—Cl2119.39 (18)
C10—C9—C18111.39 (14)C20—C21—Cl2118.91 (17)
C13—C9—C18110.31 (14)C21—C22—C23118.6 (2)
C10—C9—H9108.7C21—C22—H22120.7
C13—C9—H9108.7C23—C22—H22120.7
C18—C9—H9108.7C22—C23—C18122.25 (19)
C11—C10—C1118.05 (17)C22—C23—H23118.9
C11—C10—C9123.28 (16)C18—C23—H23118.9
C1—C10—C9118.66 (16)
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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  9-(4-Methoxy-phen-yl)-3,3,6,6-tetra-methyl-3,4,6,7-tetra-hydro-2H-xanthene-1,8(5H,9H)-dione.

Authors:  Mustafa Odabaşoğlu; Muharrem Kaya; Yılmaz Yıldırır; Orhan Büyükgüngör
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-07

3.  Chemical aspects of santalin as a histological stain.

Authors:  A Banerjee; A K Mukherjee
Journal:  Stain Technol       Date:  1981-03
  3 in total

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