| Literature DB >> 21589414 |
Abstract
In the title compound, C(17)H(19)N(5)O(5), obtained from the condensation reaction ofEntities:
Year: 2010 PMID: 21589414 PMCID: PMC3011673 DOI: 10.1107/S1600536810044983
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H19N5O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 2780 reflections | |
| θ = 3.0–25.0° | |
| µ = 0.11 mm−1 | |
| α = 84.554 (7)° | |
| β = 89.733 (6)° | Block, red |
| γ = 75.109 (7)° | 0.22 × 0.19 × 0.17 mm |
| Bruker SMART CCD area-detector diffractometer | 3069 independent reflections |
| Radiation source: fine-focus sealed tube | 1727 reflections with |
| graphite | |
| ω scans | θmax = 25.0°, θmin = 3.0° |
| Absorption correction: multi-scan ( | |
| 5395 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3069 reflections | (Δ/σ)max = 0.001 |
| 257 parameters | Δρmax = 0.18 e Å−3 |
| 1 restraint | Δρmin = −0.19 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| O1 | 0.25187 (19) | 0.6271 (3) | 0.50881 (14) | 0.0542 (6) | |
| H1 | 0.1746 | 0.6862 | 0.5369 | 0.081* | |
| O2 | −0.5619 (2) | 1.2021 (3) | 0.72130 (18) | 0.0859 (9) | |
| O3 | −0.4850 (2) | 1.0820 (3) | 0.57933 (16) | 0.0674 (7) | |
| O4 | −0.1960 (3) | 1.2721 (3) | 0.98125 (17) | 0.0822 (8) | |
| O5 | 0.0601 (3) | 1.1684 (3) | 0.96747 (16) | 0.0757 (7) | |
| N1 | −0.0540 (2) | 0.8040 (3) | 0.52221 (16) | 0.0361 (5) | |
| N2 | −0.1829 (2) | 0.9124 (3) | 0.56372 (15) | 0.0380 (6) | |
| H2 | −0.2768 | 0.9352 | 0.5326 | 0.046* | |
| N3 | −0.4544 (3) | 1.1282 (3) | 0.6656 (2) | 0.0510 (7) | |
| N4 | −0.0803 (3) | 1.1929 (3) | 0.93582 (19) | 0.0538 (7) | |
| N5 | 0.3830 (2) | 0.2866 (3) | 0.22459 (17) | 0.0418 (6) | |
| C14 | 0.3429 (3) | 0.2320 (4) | 0.1233 (2) | 0.0612 (9) | 0.72 |
| H14A | 0.4100 | 0.1223 | 0.1194 | 0.073* | 0.72 |
| H14B | 0.2312 | 0.2253 | 0.1268 | 0.073* | 0.72 |
| C15 | 0.3598 (5) | 0.3248 (6) | 0.0249 (3) | 0.0738 (14) | 0.72 |
| H15A | 0.4711 | 0.3271 | 0.0167 | 0.111* | 0.72 |
| H15B | 0.2932 | 0.4340 | 0.0258 | 0.111* | 0.72 |
| H15C | 0.3263 | 0.2760 | −0.0342 | 0.111* | 0.72 |
| C14B | 0.3429 (3) | 0.2320 (4) | 0.1233 (2) | 0.0612 (9) | 0.28 |
| H14C | 0.2653 | 0.1684 | 0.1407 | 0.073* | 0.28 |
| H14D | 0.2842 | 0.3292 | 0.0796 | 0.073* | 0.28 |
| C15B | 0.4529 (12) | 0.1441 (16) | 0.0563 (9) | 0.067 (3) | 0.28 |
| H15D | 0.4003 | 0.1415 | −0.0110 | 0.101* | 0.28 |
| H15E | 0.4944 | 0.0350 | 0.0892 | 0.101* | 0.28 |
| H15F | 0.5407 | 0.1944 | 0.0441 | 0.101* | 0.28 |
| C1 | 0.0349 (3) | 0.6209 (3) | 0.38800 (18) | 0.0316 (6) | |
| C2 | 0.1988 (3) | 0.5694 (3) | 0.42192 (19) | 0.0347 (7) | |
| C3 | 0.3117 (3) | 0.4608 (3) | 0.36813 (19) | 0.0372 (7) | |
| H3 | 0.4188 | 0.4291 | 0.3931 | 0.045* | |
| C4 | 0.2693 (3) | 0.3972 (3) | 0.27695 (19) | 0.0340 (6) | |
| C5 | 0.1057 (3) | 0.4485 (3) | 0.24127 (19) | 0.0378 (7) | |
| H5 | 0.0733 | 0.4094 | 0.1803 | 0.045* | |
| C6 | −0.0054 (3) | 0.5558 (3) | 0.29623 (19) | 0.0378 (7) | |
| H6 | −0.1127 | 0.5868 | 0.2715 | 0.045* | |
| C7 | −0.0867 (3) | 0.7351 (3) | 0.4408 (2) | 0.0353 (7) | |
| H7 | −0.1934 | 0.7603 | 0.4152 | 0.042* | |
| C8 | −0.1625 (3) | 0.9827 (3) | 0.65262 (19) | 0.0325 (6) | |
| C9 | −0.2895 (3) | 1.0890 (3) | 0.7042 (2) | 0.0349 (6) | |
| C10 | −0.2620 (3) | 1.1567 (3) | 0.79614 (19) | 0.0388 (7) | |
| H10 | −0.3475 | 1.2254 | 0.8288 | 0.047* | |
| C11 | −0.1096 (3) | 1.1223 (3) | 0.83856 (19) | 0.0379 (7) | |
| C12 | 0.0190 (3) | 1.0181 (4) | 0.7912 (2) | 0.0476 (8) | |
| H12 | 0.1229 | 0.9949 | 0.8213 | 0.057* | |
| C13 | −0.0069 (3) | 0.9507 (3) | 0.7016 (2) | 0.0420 (7) | |
| H13 | 0.0803 | 0.8811 | 0.6711 | 0.050* | |
| C16 | 0.5551 (3) | 0.2546 (4) | 0.2534 (2) | 0.0504 (8) | |
| H16A | 0.6138 | 0.1567 | 0.2226 | 0.060* | |
| H16B | 0.5675 | 0.2336 | 0.3310 | 0.060* | |
| C17 | 0.6308 (3) | 0.3901 (4) | 0.2167 (2) | 0.0611 (9) | |
| H17A | 0.6177 | 0.4134 | 0.1401 | 0.092* | |
| H17B | 0.7443 | 0.3582 | 0.2356 | 0.092* | |
| H17C | 0.5790 | 0.4856 | 0.2508 | 0.092* |
| O1 | 0.0419 (11) | 0.0745 (17) | 0.0458 (12) | −0.0051 (11) | −0.0017 (9) | −0.0321 (11) |
| O2 | 0.0393 (11) | 0.118 (2) | 0.0921 (17) | 0.0162 (12) | −0.0029 (11) | −0.0701 (16) |
| O3 | 0.0473 (11) | 0.0875 (18) | 0.0636 (14) | 0.0035 (11) | −0.0156 (10) | −0.0452 (13) |
| O4 | 0.0799 (16) | 0.102 (2) | 0.0634 (15) | −0.0050 (14) | 0.0036 (13) | −0.0537 (14) |
| O5 | 0.0664 (14) | 0.102 (2) | 0.0637 (14) | −0.0249 (13) | −0.0202 (12) | −0.0256 (14) |
| N1 | 0.0338 (12) | 0.0365 (14) | 0.0357 (12) | −0.0033 (10) | 0.0072 (10) | −0.0090 (11) |
| N2 | 0.0330 (12) | 0.0389 (15) | 0.0385 (13) | 0.0000 (10) | 0.0015 (10) | −0.0117 (11) |
| N3 | 0.0367 (13) | 0.0542 (18) | 0.0583 (16) | 0.0033 (12) | −0.0024 (12) | −0.0271 (14) |
| N4 | 0.0623 (17) | 0.0568 (19) | 0.0433 (15) | −0.0149 (14) | −0.0056 (14) | −0.0109 (13) |
| N5 | 0.0365 (12) | 0.0470 (16) | 0.0454 (14) | −0.0113 (11) | 0.0070 (11) | −0.0209 (12) |
| C14 | 0.0525 (18) | 0.078 (3) | 0.056 (2) | −0.0138 (17) | 0.0129 (16) | −0.0328 (19) |
| C15 | 0.084 (3) | 0.083 (4) | 0.058 (3) | −0.031 (3) | 0.006 (2) | 0.000 (3) |
| C14B | 0.0525 (18) | 0.078 (3) | 0.056 (2) | −0.0138 (17) | 0.0129 (16) | −0.0328 (19) |
| C15B | 0.057 (7) | 0.083 (10) | 0.074 (8) | −0.021 (6) | 0.036 (6) | −0.061 (7) |
| C1 | 0.0313 (14) | 0.0314 (16) | 0.0318 (14) | −0.0073 (12) | 0.0025 (11) | −0.0034 (12) |
| C2 | 0.0376 (15) | 0.0386 (18) | 0.0307 (15) | −0.0125 (13) | 0.0020 (12) | −0.0089 (13) |
| C3 | 0.0272 (13) | 0.0469 (18) | 0.0362 (15) | −0.0047 (12) | 0.0013 (12) | −0.0107 (13) |
| C4 | 0.0352 (14) | 0.0326 (17) | 0.0364 (15) | −0.0114 (12) | 0.0064 (12) | −0.0066 (13) |
| C5 | 0.0373 (15) | 0.0395 (17) | 0.0386 (15) | −0.0096 (13) | 0.0012 (12) | −0.0143 (13) |
| C6 | 0.0300 (14) | 0.0413 (18) | 0.0415 (16) | −0.0068 (12) | −0.0020 (12) | −0.0080 (14) |
| C7 | 0.0327 (14) | 0.0348 (17) | 0.0368 (15) | −0.0048 (12) | 0.0016 (12) | −0.0068 (13) |
| C8 | 0.0365 (15) | 0.0282 (16) | 0.0312 (14) | −0.0054 (12) | 0.0028 (12) | −0.0036 (12) |
| C9 | 0.0299 (14) | 0.0336 (17) | 0.0388 (15) | −0.0027 (12) | −0.0002 (12) | −0.0078 (13) |
| C10 | 0.0366 (15) | 0.0381 (18) | 0.0385 (16) | −0.0017 (13) | 0.0024 (13) | −0.0094 (13) |
| C11 | 0.0436 (16) | 0.0413 (18) | 0.0295 (15) | −0.0109 (13) | −0.0022 (13) | −0.0072 (13) |
| C12 | 0.0344 (15) | 0.058 (2) | 0.0458 (17) | −0.0043 (14) | −0.0064 (13) | −0.0065 (16) |
| C13 | 0.0356 (15) | 0.0456 (19) | 0.0414 (16) | −0.0018 (13) | 0.0035 (13) | −0.0110 (14) |
| C16 | 0.0351 (15) | 0.049 (2) | 0.066 (2) | −0.0040 (14) | 0.0092 (14) | −0.0243 (16) |
| C17 | 0.0512 (18) | 0.070 (2) | 0.068 (2) | −0.0201 (17) | 0.0168 (16) | −0.0263 (18) |
| O1—C2 | 1.359 (3) | C1—C2 | 1.408 (3) |
| O1—H1 | 0.8200 | C1—C7 | 1.434 (3) |
| O2—N3 | 1.226 (3) | C2—C3 | 1.376 (3) |
| O3—N3 | 1.234 (3) | C3—C4 | 1.395 (3) |
| O4—N4 | 1.216 (3) | C3—H3 | 0.9300 |
| O5—N4 | 1.223 (3) | C4—C5 | 1.412 (3) |
| N1—C7 | 1.288 (3) | C5—C6 | 1.369 (3) |
| N1—N2 | 1.377 (3) | C5—H5 | 0.9300 |
| N2—C8 | 1.344 (3) | C6—H6 | 0.9300 |
| N2—H2 | 0.8600 | C7—H7 | 0.9300 |
| N3—C9 | 1.434 (3) | C8—C13 | 1.414 (3) |
| N4—C11 | 1.457 (3) | C8—C9 | 1.419 (3) |
| N5—C4 | 1.379 (3) | C9—C10 | 1.381 (3) |
| N5—C14 | 1.460 (3) | C10—C11 | 1.356 (3) |
| N5—C16 | 1.462 (3) | C10—H10 | 0.9300 |
| C14—C15 | 1.426 (5) | C11—C12 | 1.391 (4) |
| C14—H14A | 0.9700 | C12—C13 | 1.351 (3) |
| C14—H14B | 0.9700 | C12—H12 | 0.9300 |
| C15—H15A | 0.9600 | C13—H13 | 0.9300 |
| C15—H15B | 0.9600 | C16—C17 | 1.500 (4) |
| C15—H15C | 0.9600 | C16—H16A | 0.9700 |
| C15B—H15D | 0.9600 | C16—H16B | 0.9700 |
| C15B—H15E | 0.9600 | C17—H17A | 0.9600 |
| C15B—H15F | 0.9600 | C17—H17B | 0.9600 |
| C1—C6 | 1.402 (3) | C17—H17C | 0.9600 |
| C2—O1—H1 | 109.5 | C4—C5—H5 | 119.9 |
| C7—N1—N2 | 116.1 (2) | C5—C6—C1 | 123.1 (2) |
| C8—N2—N1 | 120.3 (2) | C5—C6—H6 | 118.5 |
| C8—N2—H2 | 119.8 | C1—C6—H6 | 118.5 |
| N1—N2—H2 | 119.8 | N1—C7—C1 | 122.6 (2) |
| O2—N3—O3 | 121.8 (2) | N1—C7—H7 | 118.7 |
| O2—N3—C9 | 118.9 (2) | C1—C7—H7 | 118.7 |
| O3—N3—C9 | 119.3 (2) | N2—C8—C13 | 120.1 (2) |
| O4—N4—O5 | 123.6 (3) | N2—C8—C9 | 124.3 (2) |
| O4—N4—C11 | 118.6 (3) | C13—C8—C9 | 115.7 (2) |
| O5—N4—C11 | 117.8 (3) | C10—C9—C8 | 121.9 (2) |
| C4—N5—C14 | 121.1 (2) | C10—C9—N3 | 116.3 (2) |
| C4—N5—C16 | 119.8 (2) | C8—C9—N3 | 121.8 (2) |
| C14—N5—C16 | 117.2 (2) | C11—C10—C9 | 119.6 (2) |
| C15—C14—N5 | 119.0 (3) | C11—C10—H10 | 120.2 |
| C15—C14—H14A | 107.6 | C9—C10—H10 | 120.2 |
| N5—C14—H14A | 107.6 | C10—C11—C12 | 120.8 (3) |
| C15—C14—H14B | 107.6 | C10—C11—N4 | 119.7 (2) |
| N5—C14—H14B | 107.6 | C12—C11—N4 | 119.6 (2) |
| H14A—C14—H14B | 107.0 | C13—C12—C11 | 120.1 (2) |
| H15D—C15B—H15E | 109.5 | C13—C12—H12 | 120.0 |
| H15D—C15B—H15F | 109.5 | C11—C12—H12 | 120.0 |
| H15E—C15B—H15F | 109.5 | C12—C13—C8 | 122.1 (3) |
| C6—C1—C2 | 116.0 (2) | C12—C13—H13 | 119.0 |
| C6—C1—C7 | 120.4 (2) | C8—C13—H13 | 119.0 |
| C2—C1—C7 | 123.6 (2) | N5—C16—C17 | 114.4 (2) |
| O1—C2—C3 | 117.4 (2) | N5—C16—H16A | 108.7 |
| O1—C2—C1 | 121.0 (2) | C17—C16—H16A | 108.7 |
| C3—C2—C1 | 121.7 (2) | N5—C16—H16B | 108.7 |
| C2—C3—C4 | 121.5 (2) | C17—C16—H16B | 108.7 |
| C2—C3—H3 | 119.3 | H16A—C16—H16B | 107.6 |
| C4—C3—H3 | 119.3 | C16—C17—H17A | 109.5 |
| N5—C4—C3 | 121.0 (2) | C16—C17—H17B | 109.5 |
| N5—C4—C5 | 121.4 (2) | H17A—C17—H17B | 109.5 |
| C3—C4—C5 | 117.6 (2) | C16—C17—H17C | 109.5 |
| C6—C5—C4 | 120.1 (2) | H17A—C17—H17C | 109.5 |
| C6—C5—H5 | 119.9 | H17B—C17—H17C | 109.5 |
| C7—N1—N2—C8 | 175.9 (2) | N1—N2—C8—C9 | −176.6 (2) |
| C4—N5—C14—C15 | 86.9 (4) | N2—C8—C9—C10 | 179.3 (2) |
| C16—N5—C14—C15 | −77.4 (4) | C13—C8—C9—C10 | 0.1 (4) |
| C6—C1—C2—O1 | 178.8 (2) | N2—C8—C9—N3 | 1.3 (4) |
| C7—C1—C2—O1 | −0.2 (4) | C13—C8—C9—N3 | −177.9 (2) |
| C6—C1—C2—C3 | −0.3 (3) | O2—N3—C9—C10 | −8.1 (4) |
| C7—C1—C2—C3 | −179.3 (2) | O3—N3—C9—C10 | 174.4 (2) |
| O1—C2—C3—C4 | −178.8 (2) | O2—N3—C9—C8 | 170.0 (3) |
| C1—C2—C3—C4 | 0.3 (4) | O3—N3—C9—C8 | −7.5 (4) |
| C14—N5—C4—C3 | −173.9 (2) | C8—C9—C10—C11 | 0.5 (4) |
| C16—N5—C4—C3 | −10.0 (4) | N3—C9—C10—C11 | 178.6 (2) |
| C14—N5—C4—C5 | 7.0 (4) | C9—C10—C11—C12 | −0.8 (4) |
| C16—N5—C4—C5 | 170.8 (2) | C9—C10—C11—N4 | −179.7 (2) |
| C2—C3—C4—N5 | −179.0 (2) | O4—N4—C11—C10 | 5.3 (4) |
| C2—C3—C4—C5 | 0.2 (4) | O5—N4—C11—C10 | −175.0 (2) |
| N5—C4—C5—C6 | 178.5 (2) | O4—N4—C11—C12 | −173.7 (3) |
| C3—C4—C5—C6 | −0.6 (4) | O5—N4—C11—C12 | 6.0 (4) |
| C4—C5—C6—C1 | 0.6 (4) | C10—C11—C12—C13 | 0.4 (4) |
| C2—C1—C6—C5 | −0.1 (4) | N4—C11—C12—C13 | 179.4 (2) |
| C7—C1—C6—C5 | 178.9 (2) | C11—C12—C13—C8 | 0.2 (4) |
| N2—N1—C7—C1 | 179.2 (2) | N2—C8—C13—C12 | −179.7 (2) |
| C6—C1—C7—N1 | −176.6 (2) | C9—C8—C13—C12 | −0.4 (4) |
| C2—C1—C7—N1 | 2.3 (4) | C4—N5—C16—C17 | −72.3 (3) |
| N1—N2—C8—C13 | 2.6 (3) | C14—N5—C16—C17 | 92.2 (3) |
| Cg2 is the centroid of the C8–C13 ring. |
| H··· | ||||
| O1—H1···N1 | 0.82 | 1.95 | 2.672 (3) | 146 |
| N2—H2···O3i | 0.86 | 2.51 | 3.344 (3) | 162 |
| C15—H15B···O4ii | 0.96 | 2.43 | 3.359 (6) | 164 |
| C14—H14C···Cg2iii | 0.96 | 2.71 | 3.620 (4) | 157 |
Hydrogen-bond geometry (Å, °)
Cg2 is the centroid of the C8–C13 ring.
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1 | 0.82 | 1.95 | 2.672 (3) | 146 |
| N2—H2⋯O3i | 0.86 | 2.51 | 3.344 (3) | 162 |
| C15—H15 | 0.96 | 2.43 | 3.359 (6) | 164 |
| C14—H14 | 0.96 | 2.71 | 3.620 (4) | 157 |
Symmetry codes: (i) ; (ii) ; (iii) .