Literature DB >> 21589405

1-Methyl-2-[(E)-2,4,5-trimeth-oxy-styr-yl]-pyridinium iodide.

Charoensak Mueangkeaw, Suchada Chantrapromma, Pumsak Ruanwas, Hoong-Kun Fun.   

Abstract

In the title compound, C(17)H(20)NO(3) (+)·I(-), the cation exists in the E configuration. The pyridinium and benzene rings are close to coplanar, with a dihedral angle of 7.43 (12)° between them. The three meth-oxy groups of 2,4,5-trimeth-oxy-phenyl are essentially coplanar with the benzene plane, with C-O-C-C torsion angles of 1.0 (3), -1.9 (3) and 3.6 (3)°. A weak intra-molecular C-H⋯O inter-action generates an S(6) ring motif. In the crystal, the cations are stacked in columns in an anti-parallel manner along the a axis through π-π inter-actions, with a centroid-centroid distance of 3.7714 (16) Å. The iodide anion is situated between the columns and linked to the cation by a weak C-H⋯I inter-action.

Entities:  

Year:  2010        PMID: 21589405      PMCID: PMC3011747          DOI: 10.1107/S1600536810043254

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For bond-length data, see: Allen et al. (1987 ▶). For related literature on hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For background to nonlinear optical properties and applications of pyridinium and quinolinium derivatives, see: Chanawanno et al. (2010 ▶); Chantrapromma et al. (2010 ▶); Ruanwas et al. (2010 ▶); Williams (1984 ▶). For related structures, see: Chanawanno et al. (2008 ▶); Fun et al. (2009 ▶); Kaewmanee et al. (2010 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C17H20NO3 +·I− M = 413.24 Triclinic, a = 8.9109 (1) Å b = 10.3551 (1) Å c = 10.8201 (2) Å α = 113.382 (1)° β = 109.243 (1)° γ = 96.831 (1)° V = 828.51 (2) Å3 Z = 2 Mo Kα radiation μ = 1.94 mm−1 T = 100 K 0.37 × 0.32 × 0.18 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.534, T max = 0.720 29408 measured reflections 4827 independent reflections 4686 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.084 S = 1.14 4827 reflections 203 parameters H-atom parameters constrained Δρmax = 1.85 e Å−3 Δρmin = −0.33 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810043254/is2612sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810043254/is2612Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H20NO3+·IZ = 2
Mr = 413.24F(000) = 412
Triclinic, P1Dx = 1.656 Mg m3
Hall symbol: -P 1Melting point = 544–545 K
a = 8.9109 (1) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.3551 (1) ÅCell parameters from 4827 reflections
c = 10.8201 (2) Åθ = 2.2–30.0°
α = 113.382 (1)°µ = 1.94 mm1
β = 109.243 (1)°T = 100 K
γ = 96.831 (1)°Block, orange
V = 828.51 (2) Å30.37 × 0.32 × 0.18 mm
Bruker APEXII CCD area-detector diffractometer4827 independent reflections
Radiation source: sealed tube4686 reflections with I > 2σ(I)
graphiteRint = 0.024
φ and ω scansθmax = 30.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −12→12
Tmin = 0.534, Tmax = 0.720k = −14→13
29408 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.084H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0418P)2 + 1.7349P] where P = (Fo2 + 2Fc2)/3
4827 reflections(Δ/σ)max = 0.001
203 parametersΔρmax = 1.85 e Å3
0 restraintsΔρmin = −0.33 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.63632 (2)0.272468 (17)0.263674 (17)0.01981 (6)
O10.1870 (2)0.19738 (18)0.43228 (18)0.0142 (3)
O20.0422 (2)0.40374 (18)0.85063 (19)0.0141 (3)
O30.1169 (2)0.20276 (19)0.92393 (19)0.0152 (3)
N10.3476 (2)−0.2139 (2)0.1812 (2)0.0116 (3)
C10.3923 (3)−0.3317 (3)0.1060 (3)0.0164 (4)
H1A0.3941−0.34800.01560.020*
C20.4348 (3)−0.4269 (3)0.1614 (3)0.0179 (4)
H2A0.4628−0.50850.10840.022*
C30.4351 (3)−0.3990 (3)0.2983 (3)0.0157 (4)
H3A0.4656−0.46110.33870.019*
C40.3902 (3)−0.2792 (2)0.3738 (2)0.0133 (4)
H4A0.3916−0.26040.46570.016*
C50.3422 (3)−0.1847 (2)0.3140 (2)0.0105 (3)
C60.2895 (3)−0.0589 (2)0.3851 (2)0.0118 (4)
H6A0.27270.00480.34420.014*
C70.2639 (3)−0.0305 (2)0.5083 (2)0.0109 (3)
H7A0.2832−0.09670.54560.013*
C80.2103 (3)0.0895 (2)0.5905 (2)0.0101 (3)
C90.1697 (3)0.2006 (2)0.5538 (2)0.0109 (4)
C100.1146 (3)0.3083 (2)0.6399 (2)0.0117 (4)
H10A0.08870.38140.61480.014*
C110.0984 (3)0.3064 (2)0.7627 (2)0.0111 (4)
C120.1396 (3)0.1966 (2)0.8021 (2)0.0116 (4)
C130.1940 (3)0.0915 (2)0.7170 (2)0.0112 (4)
H13A0.22100.01930.74350.013*
C140.3022 (3)−0.1177 (3)0.1125 (3)0.0177 (4)
H14A0.3121−0.15450.01980.027*
H14B0.3754−0.01980.17710.027*
H14C0.1899−0.11650.09600.027*
C150.1497 (3)0.3104 (3)0.3933 (3)0.0196 (5)
H15A0.17850.30100.31270.029*
H15B0.21240.40490.47690.029*
H15C0.03330.30120.36410.029*
C160.0013 (3)0.5189 (3)0.8167 (3)0.0163 (4)
H16A−0.03560.58040.88690.024*
H16B−0.08550.47690.71890.024*
H16C0.09770.57660.82140.024*
C170.1636 (3)0.0946 (3)0.9660 (3)0.0197 (4)
H17A0.14150.10611.05030.030*
H17B0.27980.10620.99070.030*
H17C0.1008−0.00160.88530.030*
U11U22U33U12U13U23
I10.02761 (10)0.01804 (9)0.01905 (9)0.00876 (6)0.01258 (7)0.01051 (7)
O10.0254 (8)0.0137 (7)0.0124 (7)0.0114 (6)0.0120 (6)0.0092 (6)
O20.0208 (8)0.0128 (7)0.0159 (7)0.0108 (6)0.0126 (6)0.0075 (6)
O30.0240 (8)0.0171 (8)0.0139 (7)0.0115 (6)0.0132 (6)0.0102 (6)
N10.0147 (8)0.0123 (8)0.0100 (8)0.0061 (6)0.0071 (6)0.0052 (7)
C10.0202 (10)0.0179 (10)0.0138 (9)0.0106 (8)0.0107 (8)0.0054 (8)
C20.0220 (11)0.0166 (10)0.0176 (10)0.0115 (8)0.0115 (9)0.0058 (8)
C30.0185 (10)0.0143 (10)0.0189 (10)0.0093 (8)0.0101 (8)0.0089 (8)
C40.0171 (9)0.0136 (9)0.0131 (9)0.0076 (7)0.0082 (8)0.0074 (8)
C50.0117 (8)0.0107 (8)0.0097 (8)0.0043 (7)0.0056 (7)0.0041 (7)
C60.0151 (9)0.0109 (9)0.0110 (9)0.0062 (7)0.0066 (7)0.0049 (7)
C70.0132 (8)0.0101 (8)0.0108 (9)0.0052 (7)0.0060 (7)0.0046 (7)
C80.0122 (8)0.0101 (8)0.0098 (8)0.0048 (7)0.0061 (7)0.0046 (7)
C90.0138 (9)0.0114 (9)0.0093 (8)0.0050 (7)0.0058 (7)0.0052 (7)
C100.0149 (9)0.0111 (9)0.0120 (9)0.0061 (7)0.0070 (7)0.0064 (7)
C110.0122 (8)0.0107 (9)0.0117 (9)0.0053 (7)0.0071 (7)0.0041 (7)
C120.0138 (9)0.0134 (9)0.0109 (9)0.0060 (7)0.0072 (7)0.0066 (7)
C130.0142 (9)0.0115 (9)0.0109 (9)0.0055 (7)0.0066 (7)0.0062 (7)
C140.0277 (11)0.0193 (10)0.0157 (10)0.0122 (9)0.0133 (9)0.0120 (9)
C150.0355 (13)0.0173 (10)0.0165 (10)0.0149 (9)0.0146 (9)0.0125 (9)
C160.0205 (10)0.0128 (9)0.0216 (11)0.0100 (8)0.0128 (9)0.0089 (8)
C170.0298 (12)0.0228 (11)0.0190 (11)0.0142 (10)0.0154 (9)0.0152 (9)
O1—C91.362 (2)C7—H7A0.9300
O1—C151.432 (3)C8—C91.407 (3)
O2—C111.358 (2)C8—C131.416 (3)
O2—C161.433 (3)C9—C101.399 (3)
O3—C121.377 (3)C10—C111.391 (3)
O3—C171.423 (3)C10—H10A0.9300
N1—C11.360 (3)C11—C121.411 (3)
N1—C51.366 (3)C12—C131.375 (3)
N1—C141.481 (3)C13—H13A0.9300
C1—C21.372 (3)C14—H14A0.9600
C1—H1A0.9300C14—H14B0.9600
C2—C31.391 (3)C14—H14C0.9600
C2—H2A0.9300C15—H15A0.9600
C3—C41.378 (3)C15—H15B0.9600
C3—H3A0.9300C15—H15C0.9600
C4—C51.406 (3)C16—H16A0.9600
C4—H4A0.9300C16—H16B0.9600
C5—C61.448 (3)C16—H16C0.9600
C6—C71.350 (3)C17—H17A0.9600
C6—H6A0.9300C17—H17B0.9600
C7—C81.451 (3)C17—H17C0.9600
C9—O1—C15118.29 (17)C9—C10—H10A119.8
C11—O2—C16117.54 (18)O2—C11—C10124.67 (19)
C12—O3—C17115.34 (17)O2—C11—C12115.43 (18)
C1—N1—C5122.11 (19)C10—C11—C12119.89 (19)
C1—N1—C14117.39 (19)C13—C12—O3125.15 (19)
C5—N1—C14120.50 (18)C13—C12—C11119.29 (19)
N1—C1—C2121.0 (2)O3—C12—C11115.53 (18)
N1—C1—H1A119.5C12—C13—C8122.16 (19)
C2—C1—H1A119.5C12—C13—H13A118.9
C1—C2—C3118.8 (2)C8—C13—H13A118.9
C1—C2—H2A120.6N1—C14—H14A109.5
C3—C2—H2A120.6N1—C14—H14B109.5
C4—C3—C2119.8 (2)H14A—C14—H14B109.5
C4—C3—H3A120.1N1—C14—H14C109.5
C2—C3—H3A120.1H14A—C14—H14C109.5
C3—C4—C5121.0 (2)H14B—C14—H14C109.5
C3—C4—H4A119.5O1—C15—H15A109.5
C5—C4—H4A119.5O1—C15—H15B109.5
N1—C5—C4117.30 (19)H15A—C15—H15B109.5
N1—C5—C6118.57 (19)O1—C15—H15C109.5
C4—C5—C6124.13 (19)H15A—C15—H15C109.5
C7—C6—C5122.6 (2)H15B—C15—H15C109.5
C7—C6—H6A118.7O2—C16—H16A109.5
C5—C6—H6A118.7O2—C16—H16B109.5
C6—C7—C8128.7 (2)H16A—C16—H16B109.5
C6—C7—H7A115.6O2—C16—H16C109.5
C8—C7—H7A115.6H16A—C16—H16C109.5
C9—C8—C13117.62 (18)H16B—C16—H16C109.5
C9—C8—C7126.06 (19)O3—C17—H17A109.5
C13—C8—C7116.29 (18)O3—C17—H17B109.5
O1—C9—C10122.56 (19)H17A—C17—H17B109.5
O1—C9—C8116.78 (18)O3—C17—H17C109.5
C10—C9—C8120.65 (19)H17A—C17—H17C109.5
C11—C10—C9120.37 (19)H17B—C17—H17C109.5
C11—C10—H10A119.8
C5—N1—C1—C2−0.2 (3)C7—C8—C9—O1−2.0 (3)
C14—N1—C1—C2−179.5 (2)C13—C8—C9—C10−0.3 (3)
N1—C1—C2—C3−1.5 (4)C7—C8—C9—C10178.1 (2)
C1—C2—C3—C41.3 (4)O1—C9—C10—C11179.8 (2)
C2—C3—C4—C50.6 (4)C8—C9—C10—C11−0.3 (3)
C1—N1—C5—C42.0 (3)C16—O2—C11—C10−1.9 (3)
C14—N1—C5—C4−178.8 (2)C16—O2—C11—C12178.99 (19)
C1—N1—C5—C6−178.5 (2)C9—C10—C11—O2−178.3 (2)
C14—N1—C5—C60.6 (3)C9—C10—C11—C120.8 (3)
C3—C4—C5—N1−2.2 (3)C17—O3—C12—C133.6 (3)
C3—C4—C5—C6178.4 (2)C17—O3—C12—C11−178.1 (2)
N1—C5—C6—C7173.0 (2)O2—C11—C12—C13178.53 (19)
C4—C5—C6—C7−7.7 (3)C10—C11—C12—C13−0.6 (3)
C5—C6—C7—C8−179.5 (2)O2—C11—C12—O30.1 (3)
C6—C7—C8—C91.7 (4)C10—C11—C12—O3−179.03 (19)
C6—C7—C8—C13−179.9 (2)O3—C12—C13—C8178.2 (2)
C15—O1—C9—C101.0 (3)C11—C12—C13—C80.0 (3)
C15—O1—C9—C8−178.9 (2)C9—C8—C13—C120.4 (3)
C13—C8—C9—O1179.63 (19)C7—C8—C13—C12−178.1 (2)
D—H···AD—HH···AD···AD—H···A
C6—H6A···O10.932.192.819 (3)124
C14—H14A···I1i0.963.033.992 (3)177
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6A⋯O10.932.192.819 (3)124
C14—H14A⋯I1i0.963.033.992 (3)177

Symmetry code: (i) .

  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, structure and in vitro antibacterial activities of new hybrid disinfectants quaternary ammonium compounds: pyridinium and quinolinium stilbene benzenesulfonates.

Authors:  Kullapa Chanawanno; Suchada Chantrapromma; Theerasak Anantapong; Akkharawit Kanjana-Opas; Hoong-Kun Fun
Journal:  Eur J Med Chem       Date:  2010-06-17       Impact factor: 6.514

3.  2-[(E)-4-(Diethyl-amino)-styr-yl]-1-methyl-pyridinium iodide.

Authors:  Narissara Kaewmanee; Kullapa Chanawanno; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-25

4.  2-[(E)-2-(4-Chloro-phen-yl)ethen-yl]-1-methylpyridinium iodide monohydrate.

Authors:  Kullapa Chanawanno; Suchada Chantrapromma; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-06

5.  (E)-2-[4-(Dimethyl-amino)-styr-yl]-1-methyl-pyridinium 4-methyl-benzene-sulfonate monohydrate.

Authors:  Suchada Chantrapromma; Kullapa Chanawanno; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10

6.  (E)-1-Methyl-2-styrylpyridinium iodide.

Authors:  Hoong-Kun Fun; Kullapa Chanawanno; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-18

7.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  7 in total
  2 in total

1.  1-Methyl-2-[(E)-2,4,5-trimeth-oxy-styr-yl]-pyridinium benzene-sulfonate mono-hydrate.

Authors:  Hoong-Kun Fun; Suchada Chantrapromma; Pumsak Ruanwas; Teerasak Anantapong; Nawong Boonnak
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-29

2.  1-Methyl-2-[(E)-2,4,5-trimeth-oxy-styr-yl]pyridinium 4-meth-oxy-benzene-sulfonate monohydrate.

Authors:  Hoong-Kun Fun; Charoensak Mueangkeaw; Pumsak Ruanwas; Suchada Chantrapromma
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-12
  2 in total

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