Literature DB >> 21589364

1-[(E)-(2-Methyl-3-nitro-phen-yl)imino-meth-yl]-2-naphthol.

Yelda Bingöl Alpaslan, Ayşen Alaman Ağar, Samil Işık.   

Abstract

The title Schiff base compound, C(18)H(14)N(2)O(3), has an inter-mediate state between NH and OH tautomers. The mol-ecular structure is stabilized by an O-H⋯N hydrogen bond. The dihedral angle between the naphthalene ring system and the benzene ring is 37.44 (5)°.

Entities:  

Year:  2010        PMID: 21589364      PMCID: PMC3011447          DOI: 10.1107/S1600536810043461

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological properties of Schiff bases, see: Lozier et al. (1975 ▶). For the coordination chemistry of Schiff bases, see: Kargar et al. (2009 ▶); Yeap et al. (2009 ▶). For Schiff base tautomerism, see: Hökelek et al. (2000 ▶); Karabıyık et al. (2007 ▶); Odabaşoğlu et al. (2005 ▶); Kılıç et al. (2009 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C18H14N2O3 M = 306.31 Monoclinic, a = 12.5520 (9) Å b = 7.4731 (4) Å c = 15.8610 (13) Å β = 90.806 (6)° V = 1487.65 (18) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.7 × 0.47 × 0.12 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.989, T max = 0.997 9684 measured reflections 3088 independent reflections 1969 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.153 S = 0.94 3088 reflections 213 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.24 e Å−3 Δρmin = −0.19 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810043461/bt5391sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810043461/bt5391Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H14N2O3F(000) = 640
Mr = 306.31Dx = 1.368 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 8237 reflections
a = 12.5520 (9) Åθ = 1.3–27.3°
b = 7.4731 (4) ŵ = 0.10 mm1
c = 15.8610 (13) ÅT = 296 K
β = 90.806 (6)°PRISM., yellow
V = 1487.65 (18) Å30.7 × 0.47 × 0.12 mm
Z = 4
Stoe IPDS II diffractometer3088 independent reflections
Radiation source: fine-focus sealed tube1969 reflections with I > 2σ(I)
graphiteRint = 0.061
Detector resolution: 6.67 pixels mm-1θmax = 26.5°, θmin = 1.6°
ω scansh = −15→15
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −9→9
Tmin = 0.989, Tmax = 0.997l = −19→17
9684 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.153w = 1/[σ2(Fo2) + (0.095P)2] where P = (Fo2 + 2Fc2)/3
S = 0.94(Δ/σ)max < 0.001
3088 reflectionsΔρmax = 0.24 e Å3
213 parametersΔρmin = −0.19 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.009 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.41741 (13)0.0570 (2)0.21696 (11)0.0439 (4)
C20.35899 (13)0.0014 (2)0.28723 (11)0.0489 (4)
C30.24646 (15)−0.0112 (3)0.28256 (13)0.0605 (5)
H30.2085−0.04980.32910.073*
C40.19459 (14)0.0329 (3)0.21045 (13)0.0627 (5)
H40.12060.02580.20860.075*
C50.24883 (13)0.0898 (3)0.13724 (12)0.0510 (4)
C60.19243 (15)0.1360 (3)0.06252 (14)0.0618 (5)
H60.11840.13090.06160.074*
C70.24441 (16)0.1873 (3)−0.00749 (14)0.0648 (5)
H70.20620.2181−0.05600.078*
C80.35511 (16)0.1941 (3)−0.00694 (13)0.0606 (5)
H80.39070.2270−0.05560.073*
C90.41227 (14)0.1526 (3)0.06482 (11)0.0515 (5)
H90.48620.15940.06420.062*
C100.36138 (12)0.1001 (2)0.13924 (11)0.0441 (4)
C110.53047 (13)0.0720 (2)0.22409 (12)0.0471 (4)
H110.56860.10780.17720.057*
C120.69421 (13)0.0479 (2)0.29892 (11)0.0487 (4)
C130.74005 (13)0.1057 (2)0.37579 (11)0.0461 (4)
C140.85070 (14)0.1110 (3)0.37726 (12)0.0557 (5)
C150.91392 (15)0.0627 (4)0.31127 (15)0.0757 (7)
H150.98770.07020.31590.091*
C160.86568 (16)0.0027 (4)0.23779 (15)0.0813 (7)
H160.9068−0.03230.19240.098*
C170.75641 (15)−0.0048 (3)0.23229 (13)0.0655 (6)
H170.7239−0.04610.18300.079*
C180.67164 (14)0.1657 (3)0.44710 (12)0.0562 (5)
H18A0.71610.20050.49400.084*
H18B0.62600.06920.46370.084*
H18C0.62900.26570.42920.084*
N10.58208 (11)0.0375 (2)0.29377 (9)0.0481 (4)
N20.90826 (13)0.1746 (3)0.45348 (12)0.0695 (5)
O10.40602 (11)−0.0411 (2)0.36024 (8)0.0609 (4)
O20.88124 (15)0.1224 (3)0.52187 (11)0.1036 (7)
O30.98286 (12)0.2763 (3)0.44235 (12)0.0997 (6)
H10.489 (3)−0.023 (4)0.343 (2)0.128 (10)*
U11U22U33U12U13U23
C10.0467 (8)0.0410 (9)0.0437 (9)0.0020 (7)−0.0038 (7)−0.0022 (8)
C20.0532 (9)0.0499 (10)0.0435 (10)0.0026 (7)0.0003 (7)−0.0048 (8)
C30.0548 (10)0.0759 (14)0.0510 (11)−0.0020 (9)0.0092 (8)−0.0036 (10)
C40.0419 (9)0.0810 (14)0.0652 (13)0.0029 (9)0.0014 (9)−0.0089 (11)
C50.0472 (9)0.0541 (11)0.0515 (11)0.0041 (7)−0.0059 (8)−0.0083 (9)
C60.0506 (10)0.0709 (13)0.0634 (13)0.0104 (9)−0.0158 (9)−0.0083 (11)
C70.0716 (12)0.0672 (13)0.0552 (12)0.0102 (10)−0.0218 (10)−0.0007 (10)
C80.0738 (12)0.0603 (12)0.0474 (11)−0.0026 (9)−0.0073 (9)0.0052 (9)
C90.0531 (9)0.0517 (10)0.0496 (11)−0.0050 (8)−0.0061 (8)0.0033 (9)
C100.0478 (9)0.0391 (9)0.0453 (9)0.0011 (7)−0.0044 (7)−0.0029 (7)
C110.0493 (9)0.0461 (10)0.0459 (10)−0.0011 (7)−0.0026 (7)0.0003 (8)
C120.0470 (9)0.0509 (10)0.0480 (10)0.0015 (7)−0.0048 (7)−0.0003 (8)
C130.0473 (8)0.0476 (10)0.0434 (9)−0.0002 (7)−0.0050 (7)0.0031 (8)
C140.0487 (9)0.0655 (12)0.0526 (11)0.0008 (8)−0.0113 (8)−0.0018 (9)
C150.0443 (10)0.1099 (19)0.0727 (15)0.0034 (10)−0.0026 (9)−0.0122 (14)
C160.0546 (11)0.122 (2)0.0674 (14)0.0087 (12)0.0058 (10)−0.0223 (15)
C170.0570 (10)0.0860 (15)0.0533 (12)0.0069 (10)−0.0049 (9)−0.0168 (11)
C180.0567 (10)0.0636 (12)0.0481 (10)−0.0007 (8)−0.0018 (8)0.0019 (9)
N10.0471 (8)0.0497 (8)0.0473 (8)0.0010 (6)−0.0083 (6)−0.0003 (7)
N20.0517 (9)0.0915 (14)0.0646 (12)0.0002 (9)−0.0173 (8)−0.0044 (11)
O10.0635 (8)0.0769 (10)0.0422 (7)0.0031 (7)−0.0009 (6)0.0051 (7)
O20.1009 (13)0.154 (2)0.0552 (10)−0.0192 (12)−0.0220 (9)0.0058 (11)
O30.0650 (9)0.1341 (17)0.0991 (13)−0.0299 (10)−0.0239 (9)−0.0091 (12)
C1—C21.406 (2)C11—H110.9300
C1—C111.426 (2)C12—C171.380 (3)
C1—C101.447 (2)C12—C131.409 (2)
C2—O11.331 (2)C12—N11.411 (2)
C2—C31.417 (3)C13—C141.389 (2)
C3—C41.349 (3)C13—C181.498 (3)
C3—H30.9300C14—C151.371 (3)
C4—C51.420 (3)C14—N21.478 (3)
C4—H40.9300C15—C161.381 (3)
C5—C61.415 (3)C15—H150.9300
C5—C101.415 (2)C16—C171.374 (3)
C6—C71.351 (3)C16—H160.9300
C6—H60.9300C17—H170.9300
C7—C81.390 (3)C18—H18A0.9600
C7—H70.9300C18—H18B0.9600
C8—C91.372 (3)C18—H18C0.9600
C8—H80.9300N2—O21.206 (2)
C9—C101.406 (2)N2—O31.221 (2)
C9—H90.9300O1—H11.10 (3)
C11—N11.299 (2)
C2—C1—C11119.33 (16)C1—C11—H11118.8
C2—C1—C10119.26 (15)C17—C12—C13121.45 (16)
C11—C1—C10121.41 (15)C17—C12—N1120.96 (16)
O1—C2—C1122.05 (15)C13—C12—N1117.52 (15)
O1—C2—C3117.35 (16)C14—C13—C12114.78 (16)
C1—C2—C3120.60 (16)C14—C13—C18124.22 (16)
C4—C3—C2119.81 (18)C12—C13—C18120.91 (15)
C4—C3—H3120.1C15—C14—C13124.69 (17)
C2—C3—H3120.1C15—C14—N2115.32 (16)
C3—C4—C5122.38 (17)C13—C14—N2119.98 (17)
C3—C4—H4118.8C14—C15—C16118.58 (18)
C5—C4—H4118.8C14—C15—H15120.7
C6—C5—C10119.57 (18)C16—C15—H15120.7
C6—C5—C4121.22 (16)C17—C16—C15119.5 (2)
C10—C5—C4119.21 (16)C17—C16—H16120.3
C7—C6—C5121.06 (17)C15—C16—H16120.3
C7—C6—H6119.5C16—C17—C12120.96 (19)
C5—C6—H6119.5C16—C17—H17119.5
C6—C7—C8119.95 (17)C12—C17—H17119.5
C6—C7—H7120.0C13—C18—H18A109.5
C8—C7—H7120.0C13—C18—H18B109.5
C9—C8—C7120.52 (19)H18A—C18—H18B109.5
C9—C8—H8119.7C13—C18—H18C109.5
C7—C8—H8119.7H18A—C18—H18C109.5
C8—C9—C10121.39 (17)H18B—C18—H18C109.5
C8—C9—H9119.3C11—N1—C12121.57 (15)
C10—C9—H9119.3C11—N1—H197.0 (12)
C9—C10—C5117.49 (16)C12—N1—H1141.0 (12)
C9—C10—C1123.80 (15)O2—N2—O3123.89 (19)
C5—C10—C1118.71 (16)O2—N2—C14119.41 (19)
N1—C11—C1122.38 (17)O3—N2—C14116.68 (19)
N1—C11—H11118.8C2—O1—H199.5 (17)
C11—C1—C2—O1−1.2 (3)C2—C1—C11—N1−0.6 (3)
C10—C1—C2—O1179.59 (16)C10—C1—C11—N1178.56 (17)
C11—C1—C2—C3178.70 (17)C17—C12—C13—C142.2 (3)
C10—C1—C2—C3−0.5 (3)N1—C12—C13—C14179.22 (16)
O1—C2—C3—C4178.99 (19)C17—C12—C13—C18178.92 (19)
C1—C2—C3—C4−0.9 (3)N1—C12—C13—C18−4.1 (3)
C2—C3—C4—C51.0 (3)C12—C13—C14—C15−0.9 (3)
C3—C4—C5—C6−179.8 (2)C18—C13—C14—C15−177.5 (2)
C3—C4—C5—C100.4 (3)C12—C13—C14—N2178.16 (18)
C10—C5—C6—C71.0 (3)C18—C13—C14—N21.6 (3)
C4—C5—C6—C7−178.9 (2)C13—C14—C15—C16−0.6 (4)
C5—C6—C7—C80.5 (3)N2—C14—C15—C16−179.7 (2)
C6—C7—C8—C9−1.4 (3)C14—C15—C16—C170.8 (4)
C7—C8—C9—C100.8 (3)C15—C16—C17—C120.5 (4)
C8—C9—C10—C50.6 (3)C13—C12—C17—C16−2.1 (3)
C8—C9—C10—C1−179.21 (17)N1—C12—C17—C16−179.0 (2)
C6—C5—C10—C9−1.5 (3)C1—C11—N1—C12178.07 (15)
C4—C5—C10—C9178.39 (18)C17—C12—N1—C11−37.0 (3)
C6—C5—C10—C1178.35 (17)C13—C12—N1—C11145.97 (18)
C4—C5—C10—C1−1.8 (3)C15—C14—N2—O2−135.8 (2)
C2—C1—C10—C9−178.35 (16)C13—C14—N2—O245.0 (3)
C11—C1—C10—C92.5 (3)C15—C14—N2—O342.8 (3)
C2—C1—C10—C51.8 (2)C13—C14—N2—O3−136.3 (2)
C11—C1—C10—C5−177.34 (15)
D—H···AD—HH···AD···AD—H···A
O1—H1···N11.10 (3)1.48 (3)2.5310 (19)159 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯N11.10 (3)1.48 (3)2.5310 (19)159 (3)
  6 in total

1.  Bacteriorhodopsin: a light-driven proton pump in Halobacterium Halobium.

Authors:  R H Lozier; R A Bogomolni; W Stoeckenius
Journal:  Biophys J       Date:  1975-09       Impact factor: 4.033

2.  1-((E)-{(1R,2R)-2-[(E)-(2-Hydroxy-1-naphthyl)methyleneamino]cyclohexyl}iminiomethyl)naphthalen-2-olate: a Schiff base compound having both OH and NH character.

Authors:  Hasan Karabiyik; Bilgehan Güzel; Muhittin Aygün; Gülnaz Boğa; Orhan Büyükgüngör
Journal:  Acta Crystallogr C       Date:  2007-03-10       Impact factor: 1.172

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  2-[(4-Methoxy-phen-yl)imino-meth-yl]-4-nitro-phenol.

Authors:  Işın Kılıç; Erbil Ağar; Ferda Erşahin; Samil Işık
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-11

5.  {6,6'-Dieth-oxy-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methyl-idyne)]diphenolato}nickel(II) monohydrate.

Authors:  Hadi Kargar; Arezoo Jamshidvand; Hoong-Kun Fun; Reza Kia
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-14

6.  {6,6'-Dimeth-oxy-2,2'-[2,2-dimethyl-propane-1,3-diylbis(nitrilo-methyl-idyne)]diphenolato}nickel(II) 1.78-hydrate.

Authors:  Chin Sing Yeap; Reza Kia; Hadi Kargar; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-04-25
  6 in total

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