| Literature DB >> 21589330 |
Yan Zhao, Tonghen Pan, Zhitao Chen.
Abstract
The crystal structure of the binuclear title compound, [Cu(2)(C(12)H(11)NO(7))(2)(C(12)H(8)N(2))(2)], consists of a complex mol-ecule, which lies about a crystallographic inversion centre with one half-mol-ecule in the asymmetric unit. The Cu(II) cation is bonded to three N atoms and three O atoms, in a Jahn-Teller-distorted octa-hedral geometry. The basal plane is defined by the two N atoms from the 1,10-phenathroline and two deprotonated O atoms of the polycarboxyl-ate ligand. The axial positions are occupied by the azane N atom and a bridging carboxyl-ate O atom from the second polycarboxyl-ate ligand. The complex mol-ecules are linked through O-H⋯O hydrogen bonds into extended chains running parallel to [010].Entities:
Year: 2010 PMID: 21589330 PMCID: PMC3011806 DOI: 10.1107/S1600536810048488
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu2(C12H11NO7)2(C12H8N2)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 12–18° | |
| µ = 1.09 mm−1 | |
| β = 90.85 (3)° | Block, blue |
| 0.26 × 0.18 × 0.12 mm | |
| Rigaku Mercury CCD area-detector diffractometer | 3604 independent reflections |
| Radiation source: fine-focus sealed tube | 3408 reflections with |
| graphite | |
| ω scans | θmax = 24.7°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 14139 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3604 reflections | (Δ/σ)max = 0.001 |
| 317 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.35 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cu1 | 0.05701 (5) | 0.10839 (4) | 0.04897 (2) | 0.03031 (15) | |
| O5 | −0.0341 (3) | 0.0219 (2) | 0.11910 (12) | 0.0356 (7) | |
| O7 | 0.1363 (3) | −0.0478 (2) | 0.01526 (12) | 0.0326 (6) | |
| N1 | 0.2819 (4) | 0.0561 (3) | 0.11173 (14) | 0.0304 (7) | |
| N2 | 0.0092 (4) | 0.2758 (3) | 0.08106 (15) | 0.0319 (8) | |
| N3 | 0.1739 (4) | 0.2109 (3) | −0.01248 (15) | 0.0330 (8) | |
| O6 | 0.3412 (3) | −0.1600 (3) | −0.00516 (14) | 0.0459 (8) | |
| O2 | 0.1572 (4) | 0.7030 (3) | 0.24279 (14) | 0.0528 (9) | |
| H2 | 0.1176 | 0.7503 | 0.2184 | 0.063* | |
| O3 | 0.4623 (4) | 0.4841 (3) | 0.23479 (15) | 0.0550 (9) | |
| O1 | 0.3190 (4) | 0.6653 (3) | 0.16736 (15) | 0.0605 (9) | |
| O4 | −0.0057 (3) | −0.1359 (3) | 0.18195 (14) | 0.0500 (8) | |
| C1 | 0.2762 (5) | 0.6474 (4) | 0.2177 (2) | 0.0434 (11) | |
| C2 | 0.3508 (6) | 0.5602 (4) | 0.2620 (2) | 0.0546 (13) | |
| H2A | 0.3991 | 0.6073 | 0.2941 | 0.066* | |
| H2B | 0.2728 | 0.5089 | 0.2798 | 0.066* | |
| C3 | 0.4095 (5) | 0.3800 (4) | 0.2047 (2) | 0.0401 (10) | |
| C4 | 0.2869 (5) | 0.3104 (4) | 0.2226 (2) | 0.0482 (12) | |
| H4 | 0.2304 | 0.3347 | 0.2557 | 0.058* | |
| C5 | 0.2476 (5) | 0.2047 (4) | 0.19176 (19) | 0.0432 (11) | |
| H5 | 0.1638 | 0.1593 | 0.2043 | 0.052* | |
| C6 | 0.3299 (4) | 0.1642 (4) | 0.14239 (17) | 0.0291 (9) | |
| C7 | 0.4531 (4) | 0.2351 (4) | 0.12463 (18) | 0.0335 (9) | |
| H7 | 0.5100 | 0.2110 | 0.0917 | 0.040* | |
| C8 | 0.4928 (5) | 0.3423 (4) | 0.15567 (19) | 0.0377 (10) | |
| H8 | 0.5759 | 0.3888 | 0.1432 | 0.045* | |
| C9 | 0.2205 (4) | −0.0419 (4) | 0.14958 (18) | 0.0349 (10) | |
| H9A | 0.2570 | −0.0290 | 0.1905 | 0.042* | |
| H9B | 0.2618 | −0.1197 | 0.1360 | 0.042* | |
| C10 | 0.0478 (5) | −0.0518 (4) | 0.15017 (18) | 0.0342 (10) | |
| C11 | 0.3746 (4) | 0.0071 (4) | 0.06312 (18) | 0.0325 (9) | |
| H11A | 0.4592 | −0.0398 | 0.0801 | 0.039* | |
| H11B | 0.4168 | 0.0745 | 0.0402 | 0.039* | |
| C12 | 0.2791 (5) | −0.0758 (4) | 0.02112 (18) | 0.0327 (9) | |
| C13 | 0.2498 (4) | 0.1765 (4) | −0.06094 (19) | 0.0378 (10) | |
| H13 | 0.2383 | 0.0963 | −0.0746 | 0.045* | |
| C14 | 0.3463 (5) | 0.2557 (4) | −0.0924 (2) | 0.0452 (11) | |
| H14 | 0.3974 | 0.2285 | −0.1262 | 0.054* | |
| C15 | 0.3644 (5) | 0.3735 (4) | −0.0725 (2) | 0.0466 (12) | |
| H15 | 0.4320 | 0.4259 | −0.0918 | 0.056* | |
| C16 | 0.2812 (5) | 0.4161 (4) | −0.02308 (19) | 0.0381 (10) | |
| C17 | 0.1868 (4) | 0.3301 (4) | 0.00554 (18) | 0.0317 (9) | |
| C18 | 0.0961 (4) | 0.3654 (4) | 0.05541 (18) | 0.0336 (10) | |
| C19 | 0.0966 (5) | 0.4885 (4) | 0.0753 (2) | 0.0378 (10) | |
| C20 | 0.1934 (5) | 0.5738 (4) | 0.0444 (2) | 0.0487 (12) | |
| H20 | 0.1951 | 0.6554 | 0.0568 | 0.058* | |
| C21 | 0.2807 (5) | 0.5397 (4) | −0.0012 (2) | 0.0465 (12) | |
| H21 | 0.3430 | 0.5978 | −0.0193 | 0.056* | |
| C22 | 0.0007 (5) | 0.5157 (4) | 0.1236 (2) | 0.0452 (11) | |
| H22 | −0.0044 | 0.5955 | 0.1383 | 0.054* | |
| C23 | −0.0846 (5) | 0.4261 (4) | 0.1489 (2) | 0.0475 (12) | |
| H23 | −0.1471 | 0.4445 | 0.1812 | 0.057* | |
| C24 | −0.0788 (5) | 0.3064 (4) | 0.12670 (19) | 0.0407 (10) | |
| H24 | −0.1386 | 0.2462 | 0.1445 | 0.049* |
| Cu1 | 0.0304 (3) | 0.0260 (3) | 0.0346 (3) | −0.0016 (2) | 0.0050 (2) | 0.0013 (2) |
| O5 | 0.0316 (15) | 0.0351 (16) | 0.0403 (17) | 0.0001 (13) | 0.0064 (13) | 0.0070 (13) |
| O7 | 0.0301 (16) | 0.0294 (15) | 0.0383 (16) | −0.0020 (12) | 0.0024 (12) | −0.0052 (12) |
| N1 | 0.0304 (18) | 0.0289 (18) | 0.0320 (18) | −0.0030 (15) | 0.0074 (14) | 0.0003 (15) |
| N2 | 0.0305 (18) | 0.0294 (18) | 0.0358 (19) | 0.0004 (15) | −0.0009 (15) | 0.0044 (15) |
| N3 | 0.0286 (18) | 0.0318 (19) | 0.039 (2) | −0.0017 (15) | 0.0023 (15) | 0.0029 (15) |
| O6 | 0.0423 (18) | 0.0338 (17) | 0.062 (2) | −0.0010 (14) | 0.0179 (15) | −0.0130 (15) |
| O2 | 0.064 (2) | 0.053 (2) | 0.0415 (19) | 0.0204 (17) | 0.0086 (16) | 0.0072 (16) |
| O3 | 0.048 (2) | 0.0419 (18) | 0.075 (2) | 0.0052 (16) | −0.0136 (17) | −0.0256 (17) |
| O1 | 0.072 (2) | 0.060 (2) | 0.050 (2) | 0.0073 (19) | 0.0139 (18) | 0.0041 (18) |
| O4 | 0.0411 (18) | 0.0484 (19) | 0.061 (2) | −0.0050 (15) | 0.0101 (15) | 0.0244 (16) |
| C1 | 0.053 (3) | 0.033 (2) | 0.044 (3) | −0.003 (2) | −0.002 (2) | −0.007 (2) |
| C2 | 0.064 (3) | 0.044 (3) | 0.056 (3) | 0.013 (2) | −0.016 (3) | −0.018 (2) |
| C3 | 0.038 (2) | 0.034 (2) | 0.048 (3) | 0.002 (2) | −0.011 (2) | −0.008 (2) |
| C4 | 0.037 (2) | 0.059 (3) | 0.049 (3) | −0.001 (2) | 0.004 (2) | −0.022 (2) |
| C5 | 0.034 (2) | 0.053 (3) | 0.044 (3) | −0.013 (2) | 0.0040 (19) | −0.011 (2) |
| C6 | 0.024 (2) | 0.031 (2) | 0.032 (2) | −0.0003 (17) | −0.0007 (16) | 0.0014 (18) |
| C7 | 0.032 (2) | 0.032 (2) | 0.037 (2) | 0.0009 (18) | 0.0025 (18) | 0.0010 (18) |
| C8 | 0.039 (2) | 0.029 (2) | 0.045 (3) | −0.0052 (19) | −0.003 (2) | 0.004 (2) |
| C9 | 0.033 (2) | 0.037 (2) | 0.035 (2) | −0.0031 (18) | 0.0012 (18) | 0.0068 (19) |
| C10 | 0.035 (2) | 0.035 (2) | 0.033 (2) | −0.005 (2) | 0.0054 (18) | 0.0002 (19) |
| C11 | 0.025 (2) | 0.031 (2) | 0.042 (2) | 0.0012 (17) | 0.0034 (17) | 0.0002 (18) |
| C12 | 0.033 (2) | 0.025 (2) | 0.040 (2) | −0.0044 (18) | 0.0132 (18) | 0.0025 (18) |
| C13 | 0.033 (2) | 0.039 (2) | 0.042 (2) | −0.0031 (19) | 0.0045 (19) | 0.004 (2) |
| C14 | 0.041 (3) | 0.050 (3) | 0.045 (3) | 0.003 (2) | 0.008 (2) | 0.011 (2) |
| C15 | 0.033 (2) | 0.050 (3) | 0.056 (3) | −0.006 (2) | 0.005 (2) | 0.016 (2) |
| C16 | 0.035 (2) | 0.032 (2) | 0.047 (3) | −0.0062 (19) | −0.009 (2) | 0.014 (2) |
| C17 | 0.027 (2) | 0.030 (2) | 0.038 (2) | −0.0023 (17) | −0.0051 (17) | 0.0051 (19) |
| C18 | 0.031 (2) | 0.032 (2) | 0.037 (2) | −0.0028 (18) | −0.0089 (18) | 0.0046 (18) |
| C19 | 0.036 (2) | 0.031 (2) | 0.046 (3) | −0.0014 (19) | −0.0115 (19) | 0.001 (2) |
| C20 | 0.057 (3) | 0.030 (2) | 0.059 (3) | −0.010 (2) | −0.017 (3) | 0.002 (2) |
| C21 | 0.044 (3) | 0.038 (3) | 0.058 (3) | −0.013 (2) | −0.006 (2) | 0.009 (2) |
| C22 | 0.045 (3) | 0.035 (3) | 0.056 (3) | 0.002 (2) | −0.011 (2) | −0.009 (2) |
| C23 | 0.050 (3) | 0.049 (3) | 0.044 (3) | 0.010 (2) | −0.002 (2) | −0.009 (2) |
| C24 | 0.038 (2) | 0.042 (3) | 0.042 (3) | 0.002 (2) | 0.003 (2) | 0.002 (2) |
| Cu1—O7 | 1.987 (3) | C5—H5 | 0.9300 |
| Cu1—O5 | 1.997 (3) | C6—C7 | 1.387 (5) |
| Cu1—N2 | 2.003 (3) | C7—C8 | 1.397 (6) |
| Cu1—N3 | 2.049 (3) | C7—H7 | 0.9300 |
| Cu1—O7i | 2.293 (3) | C8—H8 | 0.9300 |
| Cu1—N1 | 2.460 (3) | C9—C10 | 1.514 (5) |
| O5—C10 | 1.272 (5) | C9—H9A | 0.9700 |
| O7—C12 | 1.290 (5) | C9—H9B | 0.9700 |
| O7—Cu1i | 2.293 (3) | C11—C12 | 1.536 (5) |
| N1—C6 | 1.420 (5) | C11—H11A | 0.9700 |
| N1—C11 | 1.462 (5) | C11—H11B | 0.9700 |
| N1—C9 | 1.465 (5) | C13—C14 | 1.401 (6) |
| N2—C24 | 1.325 (5) | C13—H13 | 0.9300 |
| N2—C18 | 1.366 (5) | C14—C15 | 1.364 (6) |
| N3—C13 | 1.327 (5) | C14—H14 | 0.9300 |
| N3—C17 | 1.363 (5) | C15—C16 | 1.406 (6) |
| O6—C12 | 1.219 (4) | C15—H15 | 0.9300 |
| O2—C1 | 1.333 (5) | C16—C17 | 1.406 (5) |
| O2—H2 | 0.8200 | C16—C21 | 1.431 (6) |
| O3—C3 | 1.392 (5) | C17—C18 | 1.426 (5) |
| O3—C2 | 1.422 (5) | C18—C19 | 1.411 (6) |
| O1—C1 | 1.201 (5) | C19—C22 | 1.405 (6) |
| O4—C10 | 1.252 (5) | C19—C20 | 1.437 (6) |
| C1—C2 | 1.510 (6) | C20—C21 | 1.331 (6) |
| C2—H2A | 0.9700 | C20—H20 | 0.9300 |
| C2—H2B | 0.9700 | C21—H21 | 0.9300 |
| C3—C4 | 1.376 (6) | C22—C23 | 1.354 (6) |
| C3—C8 | 1.382 (6) | C22—H22 | 0.9300 |
| C4—C5 | 1.381 (6) | C23—C24 | 1.395 (6) |
| C4—H4 | 0.9300 | C23—H23 | 0.9300 |
| C5—C6 | 1.393 (5) | C24—H24 | 0.9300 |
| O7—Cu1—O5 | 92.08 (11) | C3—C8—C7 | 120.5 (4) |
| O7—Cu1—N2 | 171.29 (12) | C3—C8—H8 | 119.8 |
| O5—Cu1—N2 | 93.61 (12) | C7—C8—H8 | 119.8 |
| O7—Cu1—N3 | 91.96 (12) | N1—C9—C10 | 115.5 (3) |
| O5—Cu1—N3 | 170.40 (12) | N1—C9—H9A | 108.4 |
| N2—Cu1—N3 | 81.44 (13) | C10—C9—H9A | 108.4 |
| O7—Cu1—O7i | 77.11 (11) | N1—C9—H9B | 108.4 |
| O5—Cu1—O7i | 93.01 (10) | C10—C9—H9B | 108.4 |
| N2—Cu1—O7i | 109.13 (11) | H9A—C9—H9B | 107.5 |
| N3—Cu1—O7i | 96.38 (11) | O4—C10—O5 | 123.8 (4) |
| O7—Cu1—N1 | 74.69 (11) | O4—C10—C9 | 116.0 (4) |
| O5—Cu1—N1 | 76.84 (11) | O5—C10—C9 | 120.2 (3) |
| N2—Cu1—N1 | 100.21 (12) | N1—C11—C12 | 111.2 (3) |
| N3—Cu1—N1 | 95.87 (12) | N1—C11—H11A | 109.4 |
| O7i—Cu1—N1 | 149.54 (10) | C12—C11—H11A | 109.4 |
| C10—O5—Cu1 | 119.6 (2) | N1—C11—H11B | 109.4 |
| C12—O7—Cu1 | 120.4 (2) | C12—C11—H11B | 109.4 |
| C12—O7—Cu1i | 134.3 (2) | H11A—C11—H11B | 108.0 |
| Cu1—O7—Cu1i | 102.89 (11) | O6—C12—O7 | 124.5 (4) |
| C6—N1—C11 | 119.6 (3) | O6—C12—C11 | 119.4 (4) |
| C6—N1—C9 | 115.8 (3) | O7—C12—C11 | 116.1 (3) |
| C11—N1—C9 | 111.7 (3) | N3—C13—C14 | 122.9 (4) |
| C6—N1—Cu1 | 108.0 (2) | N3—C13—H13 | 118.5 |
| C11—N1—Cu1 | 96.4 (2) | C14—C13—H13 | 118.5 |
| C9—N1—Cu1 | 101.4 (2) | C15—C14—C13 | 119.0 (4) |
| C24—N2—C18 | 118.2 (4) | C15—C14—H14 | 120.5 |
| C24—N2—Cu1 | 128.9 (3) | C13—C14—H14 | 120.5 |
| C18—N2—Cu1 | 112.4 (3) | C14—C15—C16 | 120.3 (4) |
| C13—N3—C17 | 117.8 (3) | C14—C15—H15 | 119.9 |
| C13—N3—Cu1 | 130.4 (3) | C16—C15—H15 | 119.9 |
| C17—N3—Cu1 | 111.3 (3) | C17—C16—C15 | 116.6 (4) |
| C1—O2—H2 | 109.5 | C17—C16—C21 | 117.8 (4) |
| C3—O3—C2 | 117.1 (4) | C15—C16—C21 | 125.5 (4) |
| O1—C1—O2 | 124.9 (4) | N3—C17—C16 | 123.2 (4) |
| O1—C1—C2 | 125.0 (4) | N3—C17—C18 | 116.1 (3) |
| O2—C1—C2 | 110.1 (4) | C16—C17—C18 | 120.7 (4) |
| O3—C2—C1 | 112.3 (4) | N2—C18—C19 | 123.1 (4) |
| O3—C2—H2A | 109.1 | N2—C18—C17 | 116.9 (4) |
| C1—C2—H2A | 109.1 | C19—C18—C17 | 120.0 (4) |
| O3—C2—H2B | 109.1 | C22—C19—C18 | 116.2 (4) |
| C1—C2—H2B | 109.1 | C22—C19—C20 | 126.3 (4) |
| H2A—C2—H2B | 107.9 | C18—C19—C20 | 117.6 (4) |
| C4—C3—C8 | 119.2 (4) | C21—C20—C19 | 122.1 (4) |
| C4—C3—O3 | 124.2 (4) | C21—C20—H20 | 118.9 |
| C8—C3—O3 | 116.5 (4) | C19—C20—H20 | 118.9 |
| C3—C4—C5 | 120.2 (4) | C20—C21—C16 | 121.7 (4) |
| C3—C4—H4 | 119.9 | C20—C21—H21 | 119.1 |
| C5—C4—H4 | 119.9 | C16—C21—H21 | 119.1 |
| C4—C5—C6 | 121.9 (4) | C23—C22—C19 | 120.3 (4) |
| C4—C5—H5 | 119.1 | C23—C22—H22 | 119.8 |
| C6—C5—H5 | 119.1 | C19—C22—H22 | 119.8 |
| C7—C6—C5 | 117.4 (4) | C22—C23—C24 | 120.1 (4) |
| C7—C6—N1 | 123.3 (3) | C22—C23—H23 | 119.9 |
| C5—C6—N1 | 119.2 (3) | C24—C23—H23 | 119.9 |
| C6—C7—C8 | 120.8 (4) | N2—C24—C23 | 122.1 (4) |
| C6—C7—H7 | 119.6 | N2—C24—H24 | 119.0 |
| C8—C7—H7 | 119.6 | C23—C24—H24 | 119.0 |
| H··· | ||||
| O2—H2···O4ii | 0.82 | 1.82 | 2.622 (4) | 164 |
| Cu1—O7 | 1.987 (3) |
| Cu1—O5 | 1.997 (3) |
| Cu1—N2 | 2.003 (3) |
| Cu1—N3 | 2.049 (3) |
| Cu1—O7i | 2.293 (3) |
| Cu1—N1 | 2.460 (3) |
| O7—Cu1—O5 | 92.08 (11) |
| O7—Cu1—N2 | 171.29 (12) |
| O5—Cu1—N2 | 93.61 (12) |
| O7—Cu1—N3 | 91.96 (12) |
| O5—Cu1—N3 | 170.40 (12) |
| N2—Cu1—N3 | 81.44 (13) |
| O7—Cu1—O7i | 77.11 (11) |
| O5—Cu1—O7i | 93.01 (10) |
| N2—Cu1—O7i | 109.13 (11) |
| N3—Cu1—O7i | 96.38 (11) |
| O7—Cu1—N1 | 74.69 (11) |
| O5—Cu1—N1 | 76.84 (11) |
| N2—Cu1—N1 | 100.21 (12) |
| N3—Cu1—N1 | 95.87 (12) |
| O7i—Cu1—N1 | 149.54 (10) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O4ii | 0.82 | 1.82 | 2.622 (4) | 164 |
Symmetry code: (ii) .