| Literature DB >> 21589225 |
Yue Bing1, Xing Li, Meiqin Zha, Yue Lu.
Abstract
The complex mol-ecule of the title compound, [Zn(C(13)H(9)N(2)O(3))(2)(H(2)O)(2)]·2H(2)O, has 2 symmetry with the Zn(II) cation located on a twofold rotation axis. The Zn cation is N,N'-chelated by two 5-[(pyridin-2-yl)methyl-idene-amino]-2-hy-droxy-benzoate anions and coordinated by two water mol-ecules in a distorted octa-hedral geometry. Within the anionic ligand, the pyridine ring is oriented at a dihedral angle of 49.54 (10)° with respect to the benzene ring. The carboxyl-ate group of the anionic ligand is not involved in coordination but is O-H⋯O hydrogen bonded to the coordinated and uncoordinated water mol-ecules. Weak inter-molecular C-H⋯O hydrogen bonding is also present in the crystal structure.Entities:
Year: 2010 PMID: 21589225 PMCID: PMC3011778 DOI: 10.1107/S160053681004496X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C13H9N2O3)2(H2O)2]·2H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2n 2ab | Cell parameters from 5445 reflections |
| θ = 2.3–26.5° | |
| µ = 1.00 mm−1 | |
| Block, yellow | |
| 0.43 × 0.32 × 0.27 mm |
| Bruker SMART APEX CCD area-detector diffractometer | 3041 independent reflections |
| Radiation source: fine-focus sealed tube | 2291 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.5°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 21797 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3041 reflections | (Δ/σ)max < 0.001 |
| 206 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Experimental. IR
(KBr, cm-1): 3455( |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Zn1 | 0.5000 | 0.40959 (2) | 0.2500 | 0.03779 (10) | |
| O1 | 0.49550 (12) | 0.53276 (14) | 0.14990 (11) | 0.0590 (4) | |
| O2 | 0.70387 (10) | −0.06373 (16) | −0.00402 (11) | 0.0623 (4) | |
| O3 | 0.62843 (10) | −0.24718 (13) | 0.05467 (11) | 0.0670 (4) | |
| O4 | 0.51579 (10) | −0.22474 (13) | 0.13984 (11) | 0.0615 (4) | |
| O5 | 0.37521 (14) | 0.47962 (17) | 0.02876 (13) | 0.0709 (5) | |
| N1 | 0.36496 (10) | 0.39448 (14) | 0.24957 (9) | 0.0414 (4) | |
| N2 | 0.47286 (10) | 0.24704 (13) | 0.16032 (9) | 0.0364 (3) | |
| C1 | 0.31145 (14) | 0.4780 (2) | 0.28233 (14) | 0.0525 (5) | |
| H1A | 0.3329 | 0.5440 | 0.3144 | 0.063* | |
| C2 | 0.22455 (15) | 0.4697 (2) | 0.27010 (15) | 0.0625 (6) | |
| H2A | 0.1889 | 0.5311 | 0.2919 | 0.075* | |
| C3 | 0.19182 (15) | 0.3703 (2) | 0.22564 (16) | 0.0643 (6) | |
| H3A | 0.1337 | 0.3615 | 0.2190 | 0.077* | |
| C4 | 0.24669 (13) | 0.2838 (2) | 0.19101 (14) | 0.0537 (5) | |
| H4A | 0.2262 | 0.2158 | 0.1603 | 0.064* | |
| C5 | 0.33299 (12) | 0.30015 (17) | 0.20284 (12) | 0.0416 (4) | |
| C6 | 0.39452 (12) | 0.21815 (16) | 0.16127 (12) | 0.0415 (4) | |
| H6A | 0.3765 | 0.1445 | 0.1354 | 0.050* | |
| C7 | 0.53077 (12) | 0.16496 (16) | 0.11906 (11) | 0.0363 (4) | |
| C8 | 0.59723 (12) | 0.21657 (17) | 0.07233 (12) | 0.0458 (4) | |
| H8A | 0.6034 | 0.3029 | 0.0695 | 0.055* | |
| C9 | 0.65391 (13) | 0.14022 (19) | 0.03025 (13) | 0.0507 (5) | |
| H9A | 0.6977 | 0.1753 | −0.0014 | 0.061* | |
| C10 | 0.64583 (12) | 0.01035 (18) | 0.03502 (13) | 0.0444 (4) | |
| C11 | 0.57989 (11) | −0.04244 (16) | 0.08294 (12) | 0.0386 (4) | |
| C12 | 0.52303 (11) | 0.03585 (16) | 0.12417 (11) | 0.0374 (4) | |
| H12A | 0.4790 | 0.0013 | 0.1558 | 0.045* | |
| C13 | 0.57306 (13) | −0.18215 (17) | 0.09375 (13) | 0.0470 (5) | |
| H1 | 0.5058 (16) | 0.606 (3) | 0.152 (2) | 0.081 (10)* | |
| H2 | 0.4595 (18) | 0.517 (3) | 0.1115 (18) | 0.083 (9)* | |
| H3 | 0.3812 (19) | 0.417 (3) | −0.005 (2) | 0.084 (9)* | |
| H4 | 0.326 (2) | 0.507 (3) | 0.025 (2) | 0.124 (14)* | |
| H5 | 0.685 (2) | −0.146 (3) | 0.009 (2) | 0.117 (11)* |
| Zn1 | 0.04294 (17) | 0.02329 (15) | 0.04715 (18) | 0.000 | −0.00043 (13) | 0.000 |
| O1 | 0.0828 (11) | 0.0317 (8) | 0.0625 (9) | −0.0157 (8) | −0.0203 (9) | 0.0127 (7) |
| O2 | 0.0562 (9) | 0.0523 (9) | 0.0785 (11) | −0.0026 (7) | 0.0186 (8) | −0.0231 (8) |
| O3 | 0.0642 (9) | 0.0356 (8) | 0.1011 (12) | 0.0057 (7) | 0.0064 (9) | −0.0178 (8) |
| O4 | 0.0744 (11) | 0.0280 (7) | 0.0820 (11) | −0.0052 (7) | 0.0102 (8) | 0.0028 (7) |
| O5 | 0.0746 (12) | 0.0529 (10) | 0.0851 (12) | 0.0051 (9) | −0.0225 (10) | −0.0171 (9) |
| N1 | 0.0442 (8) | 0.0357 (8) | 0.0443 (8) | 0.0064 (6) | 0.0028 (7) | 0.0041 (7) |
| N2 | 0.0446 (8) | 0.0241 (7) | 0.0406 (8) | 0.0009 (6) | 0.0000 (6) | 0.0006 (6) |
| C1 | 0.0608 (13) | 0.0453 (12) | 0.0514 (11) | 0.0133 (10) | 0.0115 (10) | 0.0046 (9) |
| C2 | 0.0562 (13) | 0.0630 (15) | 0.0684 (15) | 0.0221 (11) | 0.0210 (11) | 0.0172 (12) |
| C3 | 0.0452 (12) | 0.0712 (16) | 0.0764 (15) | 0.0103 (11) | 0.0067 (11) | 0.0232 (13) |
| C4 | 0.0462 (11) | 0.0533 (12) | 0.0616 (13) | −0.0023 (9) | −0.0050 (10) | 0.0108 (10) |
| C5 | 0.0427 (10) | 0.0356 (9) | 0.0466 (10) | 0.0005 (8) | −0.0012 (8) | 0.0081 (8) |
| C6 | 0.0466 (11) | 0.0302 (9) | 0.0477 (10) | −0.0031 (8) | −0.0059 (8) | −0.0008 (8) |
| C7 | 0.0402 (9) | 0.0283 (9) | 0.0404 (9) | −0.0013 (7) | −0.0009 (8) | −0.0014 (7) |
| C8 | 0.0593 (12) | 0.0284 (9) | 0.0497 (10) | −0.0078 (8) | 0.0067 (9) | −0.0001 (8) |
| C9 | 0.0572 (12) | 0.0423 (11) | 0.0525 (11) | −0.0125 (9) | 0.0166 (10) | −0.0025 (9) |
| C10 | 0.0457 (10) | 0.0416 (10) | 0.0459 (10) | −0.0015 (8) | 0.0015 (9) | −0.0118 (8) |
| C11 | 0.0429 (10) | 0.0285 (8) | 0.0443 (10) | −0.0031 (7) | −0.0054 (8) | −0.0039 (7) |
| C12 | 0.0394 (9) | 0.0290 (9) | 0.0438 (10) | −0.0047 (7) | −0.0017 (7) | 0.0000 (7) |
| C13 | 0.0533 (12) | 0.0284 (9) | 0.0593 (12) | 0.0014 (8) | −0.0092 (10) | −0.0067 (9) |
| Zn1—O1i | 2.0471 (15) | C1—H1A | 0.9300 |
| Zn1—O1 | 2.0471 (15) | C2—C3 | 1.372 (4) |
| Zn1—N1i | 2.1414 (17) | C2—H2A | 0.9300 |
| Zn1—N1 | 2.1414 (17) | C3—C4 | 1.379 (3) |
| Zn1—N2 | 2.2746 (14) | C3—H3A | 0.9300 |
| Zn1—N2i | 2.2746 (14) | C4—C5 | 1.388 (3) |
| O1—H1 | 0.81 (3) | C4—H4A | 0.9300 |
| O1—H2 | 0.84 (3) | C5—C6 | 1.462 (3) |
| O2—C10 | 1.357 (2) | C6—H6A | 0.9300 |
| O2—H5 | 0.95 (3) | C7—C12 | 1.389 (2) |
| O3—C13 | 1.274 (2) | C7—C8 | 1.394 (3) |
| O4—C13 | 1.244 (2) | C8—C9 | 1.380 (3) |
| O5—H3 | 0.86 (3) | C8—H8A | 0.9300 |
| O5—H4 | 0.84 (4) | C9—C10 | 1.397 (3) |
| N1—C1 | 1.333 (2) | C9—H9A | 0.9300 |
| N1—C5 | 1.344 (2) | C10—C11 | 1.403 (3) |
| N2—C6 | 1.277 (2) | C11—C12 | 1.388 (2) |
| N2—C7 | 1.423 (2) | C11—C13 | 1.508 (2) |
| C1—C2 | 1.390 (3) | C12—H12A | 0.9300 |
| O1i—Zn1—O1 | 99.88 (10) | C2—C3—H3A | 120.6 |
| O1i—Zn1—N1i | 90.66 (6) | C4—C3—H3A | 120.6 |
| O1—Zn1—N1i | 94.92 (7) | C3—C4—C5 | 118.8 (2) |
| O1i—Zn1—N1 | 94.92 (7) | C3—C4—H4A | 120.6 |
| O1—Zn1—N1 | 90.66 (6) | C5—C4—H4A | 120.6 |
| N1i—Zn1—N1 | 171.34 (8) | N1—C5—C4 | 122.45 (18) |
| O1i—Zn1—N2 | 165.91 (6) | N1—C5—C6 | 116.20 (16) |
| O1—Zn1—N2 | 90.80 (6) | C4—C5—C6 | 121.29 (18) |
| N1i—Zn1—N2 | 97.61 (5) | N2—C6—C5 | 120.37 (16) |
| N1—Zn1—N2 | 75.65 (6) | N2—C6—H6A | 119.8 |
| O1i—Zn1—N2i | 90.80 (6) | C5—C6—H6A | 119.8 |
| O1—Zn1—N2i | 165.91 (6) | C12—C7—C8 | 119.37 (17) |
| N1i—Zn1—N2i | 75.65 (6) | C12—C7—N2 | 122.05 (16) |
| N1—Zn1—N2i | 97.61 (5) | C8—C7—N2 | 118.58 (15) |
| N2—Zn1—N2i | 80.29 (7) | C9—C8—C7 | 120.36 (17) |
| Zn1—O1—H1 | 126 (2) | C9—C8—H8A | 119.8 |
| Zn1—O1—H2 | 115.9 (19) | C7—C8—H8A | 119.8 |
| H1—O1—H2 | 111 (3) | C8—C9—C10 | 120.25 (17) |
| C10—O2—H5 | 103 (2) | C8—C9—H9A | 119.9 |
| H3—O5—H4 | 109 (3) | C10—C9—H9A | 119.9 |
| C1—N1—C5 | 118.25 (18) | O2—C10—C9 | 119.64 (18) |
| C1—N1—Zn1 | 125.53 (15) | O2—C10—C11 | 120.52 (18) |
| C5—N1—Zn1 | 115.68 (12) | C9—C10—C11 | 119.79 (17) |
| C6—N2—C7 | 118.70 (15) | C12—C11—C10 | 119.14 (16) |
| C6—N2—Zn1 | 111.15 (12) | C12—C11—C13 | 119.98 (17) |
| C7—N2—Zn1 | 129.02 (12) | C10—C11—C13 | 120.80 (17) |
| N1—C1—C2 | 122.1 (2) | C11—C12—C7 | 121.09 (17) |
| N1—C1—H1A | 118.9 | C11—C12—H12A | 119.5 |
| C2—C1—H1A | 118.9 | C7—C12—H12A | 119.5 |
| C3—C2—C1 | 119.5 (2) | O4—C13—O3 | 125.32 (18) |
| C3—C2—H2A | 120.3 | O4—C13—C11 | 118.69 (17) |
| C1—C2—H2A | 120.3 | O3—C13—C11 | 115.98 (18) |
| C2—C3—C4 | 118.8 (2) |
| H··· | ||||
| O1—H1···O4ii | 0.80 (3) | 1.83 (3) | 2.618 (2) | 169 (3) |
| O1—H2···O5 | 0.84 (3) | 1.90 (3) | 2.744 (3) | 178 (3) |
| O5—H3···O3iii | 0.86 (3) | 1.98 (3) | 2.808 (2) | 161 (3) |
| O5—H4···O2iv | 0.83 (3) | 2.05 (3) | 2.881 (3) | 174 (3) |
| O2—H5···O3 | 0.95 (3) | 1.58 (3) | 2.473 (2) | 156 (3) |
| C6—H6A···O2iii | 0.93 | 2.57 | 3.346 (3) | 142 |
Selected bond lengths (Å)
| Zn1—O1 | 2.0471 (15) |
| Zn1—N1 | 2.1414 (17) |
| Zn1—N2 | 2.2746 (14) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O4i | 0.80 (3) | 1.83 (3) | 2.618 (2) | 169 (3) |
| O1—H2⋯O5 | 0.84 (3) | 1.90 (3) | 2.744 (3) | 178 (3) |
| O5—H3⋯O3ii | 0.86 (3) | 1.98 (3) | 2.808 (2) | 161 (3) |
| O5—H4⋯O2iii | 0.83 (3) | 2.05 (3) | 2.881 (3) | 174 (3) |
| O2—H5⋯O3 | 0.95 (3) | 1.58 (3) | 2.473 (2) | 156 (3) |
| C6—H6 | 0.93 | 2.57 | 3.346 (3) | 142 |
Symmetry codes: (i) ; (ii) ; (iii) .