Literature DB >> 21589156

2-[(E)-4-(Dimethyl-amino)-styr-yl]-1-methyl-pyridinium 4-chloro-benzene-sulfonate monohydrate.

Hoong-Kun Fun, Kullapa Chanawanno, Suchada Chantrapromma.   

Abstract

In the title hydrated mol-ecular salt, C(16)H(19)N(2) (+)·C(6)H(4)ClO(3)S(-)·H(2)O, the 2-[4-(dimethyl-amino)-styr-yl]-1-methyl-pyridinium cation exists in an E configuration with respect to the C=C bond and is slightly twisted, with the dihedral angle between the pyridinium and benzene rings being 9.33 (10)°. In the crystal structure, the packing is stabilized by O-H⋯O hydrogen bonds and weak C-H⋯O inter-actions, which link the cations, anions and water mol-ecules into chains propagating in [010]. These chains are stacked along the a axis by π-π inter-actions, with centroid-to-centroid distances of 3.6429 (12) and 3.6879 (12) Å; weak C-H⋯π inter-actions are also observed.

Entities:  

Year:  2010        PMID: 21589156      PMCID: PMC3009047          DOI: 10.1107/S1600536810043230

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For representative bond lengths, see Allen et al. (1987 ▶). For background to and application of quarternary ammonium compounds, see: Armitage et al. (1929 ▶); Browning et al. (1922 ▶); Chanawanno et al. (2010 ▶); Wainwright & Kristiansen (2003 ▶); Wainwright (2008 ▶). For a related structure, see: Chantra­promma et al. (2010 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C16H19N2C6H4ClO3S−·H2O M = 448.96 Triclinic, a = 6.3895 (1) Å b = 9.8739 (2) Å c = 17.0074 (3) Å α = 95.721 (1)° β = 90.500 (1)° γ = 91.260 (1)° V = 1067.32 (3) Å3 Z = 2 Mo Kα radiation μ = 0.31 mm−1 T = 100 K 0.31 × 0.10 × 0.05 mm

Data collection

Bruker APEX DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.912, T max = 0.984 23113 measured reflections 6156 independent reflections 4327 reflections with I > 2σ(I) R int = 0.065

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.135 S = 1.03 6156 reflections 282 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.43 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810043230/hb5695sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810043230/hb5695Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H19N2+·C6H4ClO3S·H2OZ = 2
Mr = 448.96F(000) = 472
Triclinic, P1Dx = 1.397 Mg m3
Hall symbol: -P 1Melting point = 516–517 K
a = 6.3895 (1) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.8739 (2) ÅCell parameters from 6156 reflections
c = 17.0074 (3) Åθ = 1.2–30.0°
α = 95.721 (1)°µ = 0.31 mm1
β = 90.500 (1)°T = 100 K
γ = 91.260 (1)°Block, orange
V = 1067.32 (3) Å30.31 × 0.10 × 0.05 mm
Bruker APEX DUO CCD diffractometer6156 independent reflections
Radiation source: sealed tube4327 reflections with I > 2σ(I)
graphiteRint = 0.065
φ and ω scansθmax = 30.0°, θmin = 1.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −8→8
Tmin = 0.912, Tmax = 0.984k = −12→13
23113 measured reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.135H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0548P)2 + 0.637P] where P = (Fo2 + 2Fc2)/3
6156 reflections(Δ/σ)max = 0.001
282 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.43 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.0246 (3)0.11936 (19)0.10897 (11)0.0156 (4)
N21.2149 (3)0.17645 (19)0.39494 (11)0.0193 (4)
C1−0.1576 (3)0.0753 (2)0.07232 (13)0.0173 (4)
H1A−0.24170.13740.05000.021*
C2−0.2199 (3)−0.0591 (2)0.06768 (13)0.0188 (5)
H2A−0.3458−0.08810.04310.023*
C3−0.0922 (3)−0.1511 (2)0.10026 (13)0.0189 (5)
H3A−0.1307−0.24290.09690.023*
C40.0920 (3)−0.1056 (2)0.13766 (13)0.0174 (4)
H4A0.1774−0.16760.15940.021*
C50.1533 (3)0.0327 (2)0.14361 (12)0.0157 (4)
C60.3439 (3)0.0866 (2)0.18323 (13)0.0167 (4)
H6A0.38300.17670.17850.020*
C70.4671 (3)0.0127 (2)0.22659 (13)0.0167 (4)
H7A0.4256−0.07760.22940.020*
C80.6572 (3)0.0584 (2)0.26937 (13)0.0162 (4)
C90.7629 (3)−0.0320 (2)0.31341 (13)0.0173 (4)
H9A0.7088−0.12010.31430.021*
C100.9449 (3)0.0052 (2)0.35563 (13)0.0181 (4)
H10A1.0101−0.05730.38450.022*
C111.0323 (3)0.1382 (2)0.35494 (13)0.0161 (4)
C120.9253 (3)0.2302 (2)0.31130 (13)0.0168 (4)
H12A0.97840.31850.31030.020*
C130.7425 (3)0.1910 (2)0.26998 (13)0.0162 (4)
H13A0.67470.25370.24200.019*
C140.0814 (4)0.2658 (2)0.10930 (14)0.0198 (5)
H14A0.10170.30530.16280.030*
H14B−0.02910.31150.08490.030*
H14C0.20840.27540.08040.030*
C151.3197 (4)0.0833 (3)0.44178 (15)0.0237 (5)
H15A1.22600.05540.48130.036*
H15B1.44120.12780.46700.036*
H15C1.36140.00480.40820.036*
C161.3169 (3)0.3058 (2)0.38333 (14)0.0204 (5)
H16A1.32900.31400.32780.031*
H16B1.45380.30980.40720.031*
H16C1.23520.37890.40730.031*
Cl11.18810 (10)0.69360 (7)0.46691 (4)0.02879 (16)
S10.57475 (8)0.54114 (6)0.17948 (3)0.01647 (13)
O10.4692 (2)0.66863 (16)0.17231 (10)0.0204 (3)
O20.4357 (3)0.43430 (17)0.20239 (10)0.0249 (4)
O30.7023 (3)0.50131 (18)0.11086 (10)0.0247 (4)
C170.7541 (3)0.5767 (2)0.26013 (13)0.0164 (4)
C180.6803 (3)0.5782 (2)0.33656 (13)0.0192 (5)
H18A0.54090.55540.34510.023*
C190.8147 (4)0.6137 (2)0.40055 (14)0.0209 (5)
H19A0.76630.61530.45200.025*
C201.0214 (3)0.6468 (2)0.38611 (13)0.0190 (5)
C211.0976 (3)0.6445 (2)0.31068 (14)0.0204 (5)
H21A1.23710.66720.30240.024*
C220.9634 (3)0.6076 (2)0.24660 (14)0.0184 (4)
H22A1.01340.60370.19530.022*
O1W0.5623 (3)0.29024 (19)0.99640 (12)0.0270 (4)
H1W10.595 (5)0.366 (4)1.026 (2)0.054 (10)*
H2W10.552 (6)0.317 (4)0.946 (3)0.075 (13)*
U11U22U33U12U13U23
N10.0147 (8)0.0158 (9)0.0156 (9)−0.0006 (7)−0.0013 (7)−0.0013 (7)
N20.0156 (9)0.0188 (10)0.0236 (10)−0.0026 (7)−0.0070 (7)0.0046 (8)
C10.0133 (9)0.0227 (11)0.0157 (10)0.0012 (8)−0.0015 (8)0.0004 (9)
C20.0155 (10)0.0239 (12)0.0164 (11)−0.0026 (9)−0.0017 (8)−0.0008 (9)
C30.0196 (10)0.0178 (11)0.0188 (11)−0.0048 (9)−0.0009 (8)0.0002 (9)
C40.0171 (10)0.0168 (11)0.0183 (11)0.0001 (8)−0.0018 (8)0.0018 (8)
C50.0132 (9)0.0197 (11)0.0139 (10)0.0018 (8)−0.0010 (8)−0.0002 (8)
C60.0150 (10)0.0157 (10)0.0189 (11)−0.0024 (8)−0.0010 (8)0.0004 (8)
C70.0157 (10)0.0138 (10)0.0198 (11)−0.0014 (8)−0.0010 (8)−0.0014 (8)
C80.0146 (10)0.0174 (11)0.0161 (10)0.0016 (8)−0.0005 (8)−0.0006 (8)
C90.0181 (10)0.0134 (10)0.0200 (11)−0.0015 (8)−0.0005 (8)0.0000 (8)
C100.0200 (10)0.0162 (11)0.0185 (11)0.0022 (8)−0.0028 (8)0.0040 (8)
C110.0137 (9)0.0202 (11)0.0139 (10)−0.0008 (8)−0.0008 (8)−0.0010 (8)
C120.0164 (10)0.0167 (11)0.0171 (10)−0.0023 (8)−0.0007 (8)0.0012 (8)
C130.0162 (10)0.0173 (11)0.0153 (10)0.0013 (8)−0.0004 (8)0.0025 (8)
C140.0194 (10)0.0152 (11)0.0249 (12)−0.0007 (8)−0.0031 (9)0.0024 (9)
C150.0183 (11)0.0275 (13)0.0260 (12)−0.0007 (9)−0.0068 (9)0.0073 (10)
C160.0182 (10)0.0220 (11)0.0205 (11)−0.0047 (9)−0.0029 (8)0.0005 (9)
Cl10.0305 (3)0.0304 (3)0.0238 (3)−0.0009 (3)−0.0125 (2)−0.0040 (2)
S10.0171 (3)0.0136 (3)0.0182 (3)−0.00053 (19)−0.0044 (2)−0.0003 (2)
O10.0215 (8)0.0158 (8)0.0239 (9)0.0022 (6)−0.0041 (6)0.0017 (6)
O20.0251 (8)0.0192 (8)0.0306 (10)−0.0073 (7)−0.0091 (7)0.0056 (7)
O30.0225 (8)0.0312 (10)0.0187 (8)0.0052 (7)−0.0026 (6)−0.0070 (7)
C170.0186 (10)0.0104 (10)0.0199 (11)0.0008 (8)−0.0036 (8)0.0004 (8)
C180.0173 (10)0.0202 (11)0.0202 (11)−0.0008 (9)0.0001 (8)0.0023 (9)
C190.0257 (11)0.0207 (11)0.0159 (11)0.0005 (9)0.0002 (9)0.0001 (9)
C200.0212 (11)0.0161 (11)0.0191 (11)0.0019 (9)−0.0061 (9)−0.0014 (9)
C210.0159 (10)0.0183 (11)0.0266 (12)−0.0019 (9)−0.0048 (9)0.0013 (9)
C220.0207 (11)0.0166 (11)0.0180 (11)0.0011 (9)−0.0005 (8)0.0013 (9)
O1W0.0358 (10)0.0209 (9)0.0238 (10)−0.0001 (8)−0.0092 (8)0.0010 (8)
N1—C11.358 (3)C13—H13A0.9300
N1—C51.371 (3)C14—H14A0.9600
N1—C141.482 (3)C14—H14B0.9600
N2—C111.372 (2)C14—H14C0.9600
N2—C151.447 (3)C15—H15A0.9600
N2—C161.452 (3)C15—H15B0.9600
C1—C21.372 (3)C15—H15C0.9600
C1—H1A0.9300C16—H16A0.9600
C2—C31.387 (3)C16—H16B0.9600
C2—H2A0.9300C16—H16C0.9600
C3—C41.378 (3)Cl1—C201.750 (2)
C3—H3A0.9300S1—O21.4495 (17)
C4—C51.406 (3)S1—O31.4562 (18)
C4—H4A0.9300S1—O11.4561 (16)
C5—C61.451 (3)S1—C171.782 (2)
C6—C71.349 (3)C17—C181.386 (3)
C6—H6A0.9300C17—C221.391 (3)
C7—C81.451 (3)C18—C191.392 (3)
C7—H7A0.9300C18—H18A0.9300
C8—C91.402 (3)C19—C201.383 (3)
C8—C131.406 (3)C19—H19A0.9300
C9—C101.385 (3)C20—C211.374 (3)
C9—H9A0.9300C21—C221.395 (3)
C10—C111.417 (3)C21—H21A0.9300
C10—H10A0.9300C22—H22A0.9300
C11—C121.413 (3)O1W—H1W10.88 (4)
C12—C131.386 (3)O1W—H2W10.91 (4)
C12—H12A0.9300
C1—N1—C5121.90 (19)C8—C13—H13A119.2
C1—N1—C14117.25 (18)N1—C14—H14A109.5
C5—N1—C14120.85 (17)N1—C14—H14B109.5
C11—N2—C15120.73 (19)H14A—C14—H14B109.5
C11—N2—C16119.76 (18)N1—C14—H14C109.5
C15—N2—C16119.16 (17)H14A—C14—H14C109.5
N1—C1—C2121.1 (2)H14B—C14—H14C109.5
N1—C1—H1A119.4N2—C15—H15A109.5
C2—C1—H1A119.4N2—C15—H15B109.5
C1—C2—C3118.99 (19)H15A—C15—H15B109.5
C1—C2—H2A120.5N2—C15—H15C109.5
C3—C2—H2A120.5H15A—C15—H15C109.5
C4—C3—C2119.6 (2)H15B—C15—H15C109.5
C4—C3—H3A120.2N2—C16—H16A109.5
C2—C3—H3A120.2N2—C16—H16B109.5
C3—C4—C5121.2 (2)H16A—C16—H16B109.5
C3—C4—H4A119.4N2—C16—H16C109.5
C5—C4—H4A119.4H16A—C16—H16C109.5
N1—C5—C4117.15 (18)H16B—C16—H16C109.5
N1—C5—C6119.21 (19)O2—S1—O3114.41 (11)
C4—C5—C6123.64 (19)O2—S1—O1113.10 (10)
C7—C6—C5123.3 (2)O3—S1—O1112.03 (10)
C7—C6—H6A118.3O2—S1—C17105.34 (10)
C5—C6—H6A118.3O3—S1—C17105.74 (10)
C6—C7—C8127.2 (2)O1—S1—C17105.26 (10)
C6—C7—H7A116.4C18—C17—C22120.5 (2)
C8—C7—H7A116.4C18—C17—S1118.96 (16)
C9—C8—C13117.25 (18)C22—C17—S1120.51 (18)
C9—C8—C7119.4 (2)C17—C18—C19120.0 (2)
C13—C8—C7123.38 (19)C17—C18—H18A120.0
C10—C9—C8122.3 (2)C19—C18—H18A120.0
C10—C9—H9A118.9C20—C19—C18118.8 (2)
C8—C9—H9A118.9C20—C19—H19A120.6
C9—C10—C11120.26 (19)C18—C19—H19A120.6
C9—C10—H10A119.9C21—C20—C19121.9 (2)
C11—C10—H10A119.9C21—C20—Cl1119.68 (17)
N2—C11—C12121.0 (2)C19—C20—Cl1118.42 (18)
N2—C11—C10121.27 (19)C20—C21—C22119.3 (2)
C12—C11—C10117.72 (18)C20—C21—H21A120.4
C13—C12—C11121.0 (2)C22—C21—H21A120.4
C13—C12—H12A119.5C17—C22—C21119.5 (2)
C11—C12—H12A119.5C17—C22—H22A120.3
C12—C13—C8121.5 (2)C21—C22—H22A120.3
C12—C13—H13A119.2H1W1—O1W—H2W1104 (3)
C5—N1—C1—C2−0.7 (3)C9—C10—C11—N2−178.6 (2)
C14—N1—C1—C2178.5 (2)C9—C10—C11—C121.1 (3)
N1—C1—C2—C3−0.8 (3)N2—C11—C12—C13179.1 (2)
C1—C2—C3—C41.1 (3)C10—C11—C12—C13−0.7 (3)
C2—C3—C4—C50.1 (3)C11—C12—C13—C8−0.4 (3)
C1—N1—C5—C41.9 (3)C9—C8—C13—C121.0 (3)
C14—N1—C5—C4−177.3 (2)C7—C8—C13—C12−179.6 (2)
C1—N1—C5—C6−178.8 (2)O2—S1—C17—C18−39.6 (2)
C14—N1—C5—C62.0 (3)O3—S1—C17—C18−161.15 (18)
C3—C4—C5—N1−1.6 (3)O1—S1—C17—C1880.12 (19)
C3—C4—C5—C6179.1 (2)O2—S1—C17—C22142.77 (18)
N1—C5—C6—C7172.1 (2)O3—S1—C17—C2221.3 (2)
C4—C5—C6—C7−8.6 (4)O1—S1—C17—C22−97.47 (19)
C5—C6—C7—C8−178.7 (2)C22—C17—C18—C191.5 (3)
C6—C7—C8—C9178.2 (2)S1—C17—C18—C19−176.11 (18)
C6—C7—C8—C13−1.1 (4)C17—C18—C19—C20−0.2 (3)
C13—C8—C9—C10−0.5 (3)C18—C19—C20—C21−0.5 (4)
C7—C8—C9—C10−179.9 (2)C18—C19—C20—Cl1179.14 (18)
C8—C9—C10—C11−0.5 (3)C19—C20—C21—C22−0.1 (3)
C15—N2—C11—C12177.8 (2)Cl1—C20—C21—C22−179.73 (17)
C16—N2—C11—C12−9.1 (3)C18—C17—C22—C21−2.1 (3)
C15—N2—C11—C10−2.5 (3)S1—C17—C22—C21175.48 (17)
C16—N2—C11—C10170.6 (2)C20—C21—C22—C171.4 (3)
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O3i0.88 (4)1.97 (4)2.831 (3)164 (3)
O1W—H2W1···O1ii0.92 (5)2.04 (5)2.944 (3)167 (4)
C1—H1A···O1Wiii0.932.243.170 (3)179
C2—H2A···O1Wiv0.932.443.229 (3)143
C4—H4A···O1v0.932.523.406 (2)160
C6—H6A···O20.932.553.453 (3)164
C13—H13A···O20.932.513.414 (3)164
C14—H14A···O20.962.513.106 (3)120
C14—H14B···O3vi0.962.583.393 (3)143
C9—H9A···Cg3v0.932.933.650 (2)135
C12—H12A···Cg30.932.953.760 (2)147
Table 1

Hydrogen-bond geometry (Å, °)

Cg3 is the centroid of the C17–C22 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O1W—H1W1⋯O3i0.88 (4)1.97 (4)2.831 (3)164 (3)
O1W—H2W1⋯O1ii0.92 (5)2.04 (5)2.944 (3)167 (4)
C1—H1A⋯O1Wiii0.932.243.170 (3)179
C2—H2A⋯O1Wiv0.932.443.229 (3)143
C4—H4A⋯O1v0.932.523.406 (2)160
C6—H6A⋯O20.932.553.453 (3)164
C13—H13A⋯O20.932.513.414 (3)164
C14—H14A⋯O20.962.513.106 (3)120
C14—H14B⋯O3vi0.962.583.393 (3)143
C9—H9ACg3v0.932.933.650 (2)135
C12—H12ACg30.932.953.760 (2)147

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis, structure and in vitro antibacterial activities of new hybrid disinfectants quaternary ammonium compounds: pyridinium and quinolinium stilbene benzenesulfonates.

Authors:  Kullapa Chanawanno; Suchada Chantrapromma; Theerasak Anantapong; Akkharawit Kanjana-Opas; Hoong-Kun Fun
Journal:  Eur J Med Chem       Date:  2010-06-17       Impact factor: 6.514

Review 4.  Quinoline and cyanine dyes--putative anti-MRSA drugs.

Authors:  Mark Wainwright; Jette E Kristiansen
Journal:  Int J Antimicrob Agents       Date:  2003-11       Impact factor: 5.283

5.  (E)-2-[4-(Dimethyl-amino)-styr-yl]-1-methyl-pyridinium 4-methyl-benzene-sulfonate monohydrate.

Authors:  Suchada Chantrapromma; Kullapa Chanawanno; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-10

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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