Literature DB >> 21589105

(2R,4R)-3-(tert-But-oxy-carbon-yl)-2-(3-chloro-phen-yl)-1,3-thia-zolidine-4-carb-oxy-lic acid monohydrate.

Zhong-Cheng Song1, Ying Guo, Wen-Hong Liu, Li-Chun Hu, Sheng-Nan Cai.   

Abstract

In the title compound, C(15)H(18)ClNO(4)S·H(2)O, the thia-zolidine ring displays a half-chair conformation. In the crystal, the water mol-ecules are linked to the organic acid mol-ecules via inter-molecular O-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21589105      PMCID: PMC3009144          DOI: 10.1107/S1600536810042133

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of thia­zolidine derivatives, see: Kallen (1971 ▶); Seki et al. (2004 ▶); Song et al. (2009 ▶).

Experimental

Crystal data

C15H18ClNO4S·H2O M = 361.83 Monoclinic, a = 8.2460 (16) Å b = 5.9660 (12) Å c = 18.132 (4) Å β = 99.81 (3)° V = 879.0 (3) Å3 Z = 2 Mo Kα radiation μ = 0.36 mm−1 T = 293 K 0.20 × 0.17 × 0.15 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (ABSCOR; Higashi, 1995 ▶) T min = 0.932, T max = 0.948 3417 measured reflections 3182 independent reflections 2169 reflections with I > 2σ(I) R int = 0.080 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.167 S = 1.03 3182 reflections 208 parameters 1 restraint H-atom parameters constrained Δρmax = 0.19 e Å−3 Δρmin = −0.28 e Å−3 Absolute structure: Flack (1983 ▶), 1451 Friedel pairs Flack parameter: −0.11 (16) Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810042133/xu5054sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810042133/xu5054Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H18ClNO4S·H2OF(000) = 380
Mr = 361.83Dx = 1.367 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 25 reflections
a = 8.2460 (16) Åθ = 9–12°
b = 5.9660 (12) ŵ = 0.36 mm1
c = 18.132 (4) ÅT = 293 K
β = 99.81 (3)°Block, colorless
V = 879.0 (3) Å30.20 × 0.17 × 0.15 mm
Z = 2
Enraf–Nonius CAD-4 diffractometer2169 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.080
graphiteθmax = 25.3°, θmin = 1.1°
ω/2θ scansh = 0→9
Absorption correction: ψ scan (ABSCOR; Higashi, 1995)k = −7→7
Tmin = 0.932, Tmax = 0.948l = −21→21
3417 measured reflections3 standard reflections every 200 reflections
3182 independent reflections intensity decay: 1%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.068H-atom parameters constrained
wR(F2) = 0.167w = 1/[σ2(Fo2) + (0.0664P)2 + 0.2379P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
3182 reflectionsΔρmax = 0.19 e Å3
208 parametersΔρmin = −0.28 e Å3
1 restraintAbsolute structure: Flack (1983), 1451 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.11 (16)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.27417 (18)0.2513 (3)0.65551 (8)0.0556 (4)
Cl0.2514 (3)0.2819 (5)0.47181 (11)0.1051 (8)
N1−0.0494 (5)0.1770 (7)0.7725 (2)0.0353 (10)
O1−0.0704 (5)−0.2937 (7)0.8136 (2)0.0621 (12)
C1−0.1971 (6)0.0662 (9)0.7899 (3)0.0379 (13)
H1A−0.25630.16770.81850.045*
O2−0.2241 (5)−0.1623 (7)0.8928 (2)0.0531 (11)
H2C−0.1984−0.28050.91480.080*
C2−0.3015 (7)0.0154 (11)0.7147 (3)0.0519 (16)
H2A−0.4163−0.00050.71950.062*
H2B−0.2653−0.12220.69400.062*
O30.0636 (4)0.1875 (6)0.89459 (18)0.0422 (9)
C3−0.0548 (6)0.2640 (10)0.6970 (3)0.0415 (12)
H3A−0.02120.42170.70070.050*
O40.1931 (4)0.3384 (6)0.80485 (18)0.0407 (9)
C40.0541 (7)0.1417 (9)0.6516 (3)0.0395 (13)
C50.0950 (7)0.2482 (12)0.5896 (3)0.0505 (14)
H5C0.05310.38970.57590.061*
C60.1987 (8)0.1427 (12)0.5482 (3)0.0592 (17)
C70.2659 (8)−0.0660 (13)0.5677 (4)0.0651 (19)
H7A0.3366−0.13340.53940.078*
C80.2260 (8)−0.1720 (11)0.6297 (3)0.0590 (17)
H8A0.2689−0.31310.64330.071*
C90.1218 (7)−0.0688 (10)0.6721 (3)0.0487 (15)
H9A0.0970−0.14020.71440.058*
C10−0.1541 (6)−0.1503 (10)0.8333 (3)0.0390 (13)
C110.0700 (6)0.2343 (9)0.8296 (3)0.0366 (11)
C120.3466 (7)0.4010 (9)0.8560 (3)0.0424 (14)
C130.4314 (7)0.1879 (12)0.8896 (4)0.0663 (19)
H13A0.36870.12360.92430.099*
H13B0.54000.22380.91520.099*
H13C0.43880.08230.85040.099*
C140.4440 (8)0.5092 (12)0.8017 (4)0.0635 (19)
H14A0.38940.64380.78190.095*
H14B0.45160.40710.76150.095*
H14C0.55250.54510.82740.095*
C150.3093 (9)0.5670 (12)0.9141 (4)0.073 (2)
H15A0.25740.69730.88940.110*
H15B0.40990.61000.94570.110*
H15C0.23690.49890.94380.110*
O50.8493 (5)0.4638 (7)0.9669 (2)0.0585 (12)
H5B0.79430.48471.00190.070*
H5A0.90530.34460.96590.070*
U11U22U33U12U13U23
S10.0481 (8)0.0689 (11)0.0474 (8)0.0106 (9)0.0013 (6)0.0065 (8)
Cl0.1239 (18)0.130 (2)0.0752 (12)0.0239 (16)0.0570 (12)0.0417 (14)
N10.041 (2)0.034 (2)0.030 (2)−0.003 (2)0.0042 (19)−0.0031 (19)
O10.076 (3)0.049 (3)0.069 (3)0.013 (2)0.031 (2)0.005 (2)
C10.037 (3)0.038 (3)0.040 (3)−0.002 (2)0.011 (2)−0.004 (2)
O20.061 (3)0.048 (3)0.055 (2)0.005 (2)0.021 (2)0.012 (2)
C20.042 (3)0.061 (4)0.052 (4)−0.007 (3)0.005 (3)−0.006 (3)
O30.047 (2)0.046 (2)0.034 (2)−0.0027 (18)0.0101 (16)0.0039 (17)
C30.046 (3)0.035 (3)0.041 (3)−0.001 (3)0.001 (2)−0.001 (3)
O40.042 (2)0.041 (2)0.0399 (19)−0.0063 (18)0.0093 (16)−0.0023 (18)
C40.042 (3)0.040 (3)0.035 (3)−0.001 (3)0.002 (2)−0.002 (3)
C50.061 (4)0.046 (3)0.047 (3)0.001 (3)0.017 (3)0.003 (3)
C60.064 (4)0.070 (5)0.045 (4)0.000 (4)0.014 (3)0.006 (3)
C70.063 (4)0.082 (5)0.054 (4)0.011 (4)0.023 (3)−0.008 (4)
C80.077 (4)0.049 (4)0.055 (4)0.015 (3)0.023 (3)0.000 (3)
C90.059 (4)0.051 (4)0.039 (3)0.003 (3)0.016 (3)0.006 (3)
C100.035 (3)0.041 (3)0.042 (3)−0.003 (3)0.006 (2)−0.002 (3)
C110.044 (3)0.027 (3)0.041 (3)0.006 (3)0.012 (2)0.000 (2)
C120.037 (3)0.039 (3)0.051 (3)−0.010 (3)0.004 (3)−0.001 (3)
C130.044 (3)0.066 (5)0.086 (5)0.003 (3)0.004 (3)0.023 (4)
C140.052 (4)0.059 (4)0.080 (5)−0.014 (3)0.009 (4)0.017 (4)
C150.079 (5)0.067 (5)0.071 (5)−0.021 (4)0.004 (4)−0.021 (4)
O50.079 (3)0.047 (3)0.054 (3)0.008 (2)0.024 (2)0.006 (2)
S1—C21.807 (6)C5—H5C0.9300
S1—C31.838 (5)C6—C71.384 (10)
Cl—C61.733 (6)C7—C81.379 (9)
N1—C111.346 (6)C7—H7A0.9300
N1—C31.457 (6)C8—C91.390 (8)
N1—C11.466 (6)C8—H8A0.9300
O1—C101.192 (6)C9—H9A0.9300
C1—C21.513 (7)C12—C151.515 (8)
C1—C101.524 (7)C12—C141.516 (8)
C1—H1A0.9800C12—C131.527 (8)
O2—C101.309 (6)C13—H13A0.9600
O2—H2C0.8200C13—H13B0.9600
C2—H2A0.9700C13—H13C0.9600
C2—H2B0.9700C14—H14A0.9600
O3—C111.221 (6)C14—H14B0.9600
C3—C41.505 (7)C14—H14C0.9600
C3—H3A0.9800C15—H15A0.9600
O4—C111.332 (6)C15—H15B0.9600
O4—C121.483 (6)C15—H15C0.9600
C4—C51.383 (8)O5—H5B0.8499
C4—C91.398 (8)O5—H5A0.8500
C5—C61.382 (8)
C2—S1—C390.2 (3)C7—C8—H8A119.9
C11—N1—C3122.2 (4)C9—C8—H8A119.9
C11—N1—C1118.3 (4)C8—C9—C4120.5 (5)
C3—N1—C1118.0 (4)C8—C9—H9A119.7
N1—C1—C2105.2 (4)C4—C9—H9A119.7
N1—C1—C10111.4 (4)O1—C10—O2124.6 (5)
C2—C1—C10110.0 (5)O1—C10—C1123.3 (5)
N1—C1—H1A110.0O2—C10—C1112.1 (5)
C2—C1—H1A110.0O3—C11—O4126.3 (5)
C10—C1—H1A110.0O3—C11—N1122.6 (5)
C10—O2—H2C109.5O4—C11—N1111.1 (4)
C1—C2—S1105.6 (4)O4—C12—C15110.3 (5)
C1—C2—H2A110.6O4—C12—C14101.0 (4)
S1—C2—H2A110.6C15—C12—C14111.5 (5)
C1—C2—H2B110.6O4—C12—C13108.9 (4)
S1—C2—H2B110.6C15—C12—C13113.6 (5)
H2A—C2—H2B108.7C14—C12—C13110.9 (5)
N1—C3—C4114.5 (4)C12—C13—H13A109.5
N1—C3—S1103.9 (3)C12—C13—H13B109.5
C4—C3—S1113.2 (4)H13A—C13—H13B109.5
N1—C3—H3A108.3C12—C13—H13C109.5
C4—C3—H3A108.3H13A—C13—H13C109.5
S1—C3—H3A108.3H13B—C13—H13C109.5
C11—O4—C12121.7 (4)C12—C14—H14A109.5
C5—C4—C9119.1 (5)C12—C14—H14B109.5
C5—C4—C3118.2 (5)H14A—C14—H14B109.5
C9—C4—C3122.6 (5)C12—C14—H14C109.5
C6—C5—C4119.5 (6)H14A—C14—H14C109.5
C6—C5—H5C120.3H14B—C14—H14C109.5
C4—C5—H5C120.3C12—C15—H15A109.5
C5—C6—C7121.9 (6)C12—C15—H15B109.5
C5—C6—Cl118.6 (5)H15A—C15—H15B109.5
C7—C6—Cl119.4 (5)C12—C15—H15C109.5
C8—C7—C6118.6 (6)H15A—C15—H15C109.5
C8—C7—H7A120.7H15B—C15—H15C109.5
C6—C7—H7A120.7H5B—O5—H5A120.0
C7—C8—C9120.3 (6)
C11—N1—C1—C2−177.5 (5)C4—C5—C6—Cl−178.7 (5)
C3—N1—C1—C216.0 (6)C5—C6—C7—C80.9 (11)
C11—N1—C1—C10−58.3 (6)Cl—C6—C7—C8178.4 (5)
C3—N1—C1—C10135.3 (5)C6—C7—C8—C9−0.8 (10)
N1—C1—C2—S1−37.1 (5)C7—C8—C9—C41.1 (10)
C10—C1—C2—S1−157.2 (4)C5—C4—C9—C8−1.5 (9)
C3—S1—C2—C139.2 (4)C3—C4—C9—C8−177.9 (5)
C11—N1—C3—C482.2 (6)N1—C1—C10—O1−51.4 (7)
C1—N1—C3—C4−111.8 (5)C2—C1—C10—O164.9 (7)
C11—N1—C3—S1−153.8 (4)N1—C1—C10—O2130.8 (5)
C1—N1—C3—S112.1 (5)C2—C1—C10—O2−112.9 (5)
C2—S1—C3—N1−29.0 (4)C12—O4—C11—O33.2 (8)
C2—S1—C3—C495.7 (4)C12—O4—C11—N1−174.5 (4)
N1—C3—C4—C5−161.1 (5)C3—N1—C11—O3169.7 (5)
S1—C3—C4—C580.0 (6)C1—N1—C11—O33.9 (7)
N1—C3—C4—C915.4 (8)C3—N1—C11—O4−12.4 (6)
S1—C3—C4—C9−103.5 (6)C1—N1—C11—O4−178.3 (4)
C9—C4—C5—C61.5 (9)C11—O4—C12—C15−62.5 (6)
C3—C4—C5—C6178.1 (5)C11—O4—C12—C14179.5 (5)
C4—C5—C6—C7−1.2 (10)C11—O4—C12—C1362.7 (6)
D—H···AD—HH···AD···AD—H···A
O2—H2C···O5i0.821.802.620 (6)177
O5—H5A···O3ii0.852.202.890 (5)139
O5—H5B···O3iii0.852.372.827 (5)114
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2C⋯O5i0.821.802.620 (6)177
O5—H5A⋯O3ii0.852.202.890 (5)139
O5—H5B⋯O3iii0.852.372.827 (5)114

Symmetry codes: (i) ; (ii) ; (iii) .

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