| Literature DB >> 21589075 |
Hoong-Kun Fun, Charoen Pakathirathien, Chatchanok Karalai, Suchada Chantrapromma.
Abstract
The title compound, C(20)H(30)O(4), is a dolabrane diterpenoid isolated from Ceriops tagal, in which one of the three fused cyclo-hexane rings adopts a half-chair conformation and the other two are in the standard chair conformations. The hy-droxy-methyl-idene substituent is attached to the half-chair cyclo-hexane. An intra-molecular O-H⋯O hydrogen bond generate an S(6) ring motif. In the crystal, mol-ecules are arranged into screw chains along the [001] direction. The crystal is stabilized by O-H⋯O hydrogen bonds and weaker C-H⋯O inter-actions.Entities:
Year: 2010 PMID: 21589075 PMCID: PMC3009018 DOI: 10.1107/S1600536810042078
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H30O4 | |
| Melting point = 495–496 K | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 2691 reflections |
| θ = 2.0–29.0° | |
| µ = 0.09 mm−1 | |
| Plate, colourless | |
| 0.58 × 0.51 × 0.10 mm | |
| Bruker APEXII CCD area-detector diffractometer | 2691 independent reflections |
| Radiation source: sealed tube | 2084 reflections with |
| graphite | |
| φ and ω scans | θmax = 29.0°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 20568 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2691 reflections | (Δ/σ)max < 0.001 |
| 220 parameters | Δρmax = 0.31 e Å−3 |
| 0 restraints | Δρmin = −0.44 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.9767 (3) | 0.4254 (2) | 0.05460 (11) | 0.0420 (6) | |
| O2 | 1.2362 (4) | 0.3517 (3) | 0.10215 (15) | 0.0633 (8) | |
| H1O2 | 1.1724 | 0.3988 | 0.0830 | 0.095* | |
| O3 | 0.5983 (4) | 0.4271 (2) | 0.41250 (10) | 0.0413 (6) | |
| O4 | 0.6697 (4) | 0.3378 (2) | 0.52946 (11) | 0.0552 (8) | |
| H1O4 | 0.6102 | 0.4000 | 0.5273 | 0.083* | |
| C1 | 0.6196 (4) | 0.2200 (3) | 0.09423 (15) | 0.0360 (8) | |
| H1A | 0.5759 | 0.1550 | 0.0665 | 0.043* | |
| H1B | 0.5242 | 0.2658 | 0.1110 | 0.043* | |
| C2 | 0.7243 (4) | 0.3092 (3) | 0.05327 (15) | 0.0379 (8) | |
| H2A | 0.7218 | 0.2792 | 0.0094 | 0.045* | |
| H2B | 0.6696 | 0.3900 | 0.0537 | 0.045* | |
| C3 | 0.9026 (4) | 0.3276 (3) | 0.07172 (13) | 0.0294 (7) | |
| C4 | 0.9885 (3) | 0.2325 (3) | 0.10845 (12) | 0.0221 (5) | |
| C5 | 0.8927 (4) | 0.1186 (3) | 0.13108 (13) | 0.0230 (6) | |
| C6 | 0.9782 (4) | 0.0532 (3) | 0.18765 (13) | 0.0301 (7) | |
| H6A | 0.9239 | −0.0267 | 0.1947 | 0.036* | |
| H6B | 1.0944 | 0.0370 | 0.1765 | 0.036* | |
| C7 | 0.9731 (4) | 0.1276 (3) | 0.24997 (14) | 0.0272 (6) | |
| H7A | 1.0337 | 0.2054 | 0.2446 | 0.033* | |
| H7B | 1.0269 | 0.0805 | 0.2840 | 0.033* | |
| C8 | 0.7911 (4) | 0.1547 (2) | 0.26801 (13) | 0.0226 (6) | |
| H8A | 0.7344 | 0.0737 | 0.2708 | 0.027* | |
| C9 | 0.6987 (3) | 0.2298 (2) | 0.21580 (13) | 0.0200 (5) | |
| C10 | 0.7108 (4) | 0.1569 (3) | 0.15117 (13) | 0.0241 (6) | |
| H10A | 0.6510 | 0.0783 | 0.1585 | 0.029* | |
| C11 | 0.5122 (4) | 0.2385 (3) | 0.23683 (14) | 0.0318 (7) | |
| H11A | 0.4514 | 0.2889 | 0.2059 | 0.038* | |
| H11B | 0.4636 | 0.1555 | 0.2363 | 0.038* | |
| C12 | 0.4884 (4) | 0.2955 (3) | 0.30434 (14) | 0.0338 (7) | |
| H12A | 0.5200 | 0.3828 | 0.3030 | 0.041* | |
| H12B | 0.3705 | 0.2912 | 0.3157 | 0.041* | |
| C13 | 0.5915 (4) | 0.2302 (3) | 0.35673 (14) | 0.0276 (6) | |
| C14 | 0.7769 (4) | 0.2146 (2) | 0.33451 (13) | 0.0227 (6) | |
| H14A | 0.8305 | 0.2958 | 0.3336 | 0.027* | |
| H14B | 0.8364 | 0.1633 | 0.3654 | 0.027* | |
| C15 | 0.6017 (4) | 0.3139 (3) | 0.41616 (14) | 0.0290 (6) | |
| C16 | 0.6242 (5) | 0.2539 (3) | 0.48109 (14) | 0.0394 (8) | |
| H16A | 0.5201 | 0.2133 | 0.4932 | 0.047* | |
| H16B | 0.7100 | 0.1900 | 0.4778 | 0.047* | |
| C17 | 0.5129 (5) | 0.1042 (3) | 0.37320 (18) | 0.0463 (9) | |
| H17A | 0.4050 | 0.1172 | 0.3926 | 0.070* | |
| H17B | 0.5844 | 0.0603 | 0.4026 | 0.070* | |
| H17C | 0.4998 | 0.0559 | 0.3347 | 0.070* | |
| C18 | 1.1538 (4) | 0.2500 (3) | 0.11951 (15) | 0.0342 (7) | |
| H18A | 1.2130 | 0.1872 | 0.1404 | 0.041* | |
| C19 | 0.8839 (5) | 0.0238 (3) | 0.07522 (15) | 0.0352 (7) | |
| H19A | 0.9938 | −0.0099 | 0.0674 | 0.053* | |
| H19B | 0.8441 | 0.0649 | 0.0372 | 0.053* | |
| H19C | 0.8085 | −0.0427 | 0.0864 | 0.053* | |
| C20 | 0.7677 (4) | 0.3630 (2) | 0.21044 (13) | 0.0236 (6) | |
| H20A | 0.7370 | 0.4095 | 0.2480 | 0.035* | |
| H20B | 0.7213 | 0.4026 | 0.1731 | 0.035* | |
| H20C | 0.8878 | 0.3602 | 0.2068 | 0.035* |
| O1 | 0.0564 (16) | 0.0328 (12) | 0.0369 (12) | 0.0036 (12) | 0.0098 (12) | 0.0126 (10) |
| O2 | 0.0435 (16) | 0.0705 (19) | 0.076 (2) | −0.0151 (15) | 0.0071 (15) | 0.0049 (17) |
| O3 | 0.0643 (16) | 0.0281 (11) | 0.0314 (11) | 0.0050 (12) | −0.0030 (12) | −0.0080 (10) |
| O4 | 0.088 (2) | 0.0437 (14) | 0.0337 (12) | 0.0225 (15) | −0.0180 (13) | −0.0096 (11) |
| C1 | 0.0222 (14) | 0.056 (2) | 0.0301 (15) | 0.0036 (14) | −0.0107 (12) | −0.0167 (15) |
| C2 | 0.0410 (19) | 0.0438 (19) | 0.0290 (16) | 0.0139 (16) | −0.0147 (14) | −0.0040 (14) |
| C3 | 0.0375 (16) | 0.0331 (16) | 0.0177 (13) | 0.0076 (14) | 0.0011 (12) | 0.0008 (12) |
| C4 | 0.0231 (13) | 0.0252 (13) | 0.0180 (12) | 0.0007 (11) | −0.0014 (10) | −0.0005 (10) |
| C5 | 0.0233 (13) | 0.0212 (13) | 0.0245 (13) | 0.0021 (11) | −0.0020 (11) | −0.0020 (10) |
| C6 | 0.0374 (17) | 0.0228 (14) | 0.0303 (14) | 0.0123 (13) | 0.0022 (13) | 0.0022 (12) |
| C7 | 0.0310 (15) | 0.0272 (14) | 0.0232 (12) | 0.0127 (13) | −0.0015 (12) | 0.0032 (11) |
| C8 | 0.0289 (14) | 0.0133 (11) | 0.0254 (13) | 0.0001 (11) | 0.0041 (11) | 0.0011 (10) |
| C9 | 0.0154 (11) | 0.0198 (12) | 0.0248 (13) | −0.0013 (10) | −0.0024 (10) | −0.0051 (11) |
| C10 | 0.0212 (13) | 0.0241 (14) | 0.0269 (14) | −0.0030 (11) | −0.0016 (11) | −0.0068 (12) |
| C11 | 0.0190 (13) | 0.0440 (18) | 0.0325 (16) | −0.0016 (13) | −0.0016 (11) | −0.0148 (14) |
| C12 | 0.0187 (14) | 0.0483 (18) | 0.0345 (15) | 0.0004 (14) | 0.0012 (12) | −0.0138 (14) |
| C13 | 0.0288 (14) | 0.0250 (14) | 0.0290 (14) | −0.0062 (13) | 0.0068 (12) | −0.0070 (12) |
| C14 | 0.0293 (14) | 0.0145 (12) | 0.0242 (13) | 0.0027 (11) | 0.0002 (11) | 0.0009 (10) |
| C15 | 0.0265 (14) | 0.0320 (15) | 0.0286 (15) | 0.0014 (13) | 0.0044 (12) | −0.0051 (12) |
| C16 | 0.050 (2) | 0.0347 (17) | 0.0333 (18) | 0.0056 (17) | 0.0005 (15) | −0.0039 (15) |
| C17 | 0.057 (2) | 0.0367 (18) | 0.0451 (19) | −0.0219 (17) | 0.0195 (18) | −0.0115 (15) |
| C18 | 0.0254 (14) | 0.0401 (18) | 0.0372 (17) | −0.0031 (14) | −0.0048 (13) | 0.0034 (15) |
| C19 | 0.0434 (19) | 0.0287 (15) | 0.0335 (16) | 0.0018 (15) | 0.0058 (15) | −0.0086 (13) |
| C20 | 0.0285 (14) | 0.0170 (12) | 0.0253 (13) | 0.0036 (11) | −0.0081 (11) | −0.0002 (11) |
| O1—C3 | 1.254 (4) | C9—C20 | 1.534 (4) |
| O2—C18 | 1.323 (4) | C9—C11 | 1.551 (4) |
| O2—H1O2 | 0.8200 | C9—C10 | 1.560 (4) |
| O3—C15 | 1.216 (4) | C10—H10A | 0.9800 |
| O4—C16 | 1.398 (4) | C11—C12 | 1.545 (4) |
| O4—H1O4 | 0.8200 | C11—H11A | 0.9700 |
| C1—C2 | 1.529 (5) | C11—H11B | 0.9700 |
| C1—C10 | 1.547 (4) | C12—C13 | 1.535 (4) |
| C1—H1A | 0.9700 | C12—H12A | 0.9700 |
| C1—H1B | 0.9700 | C12—H12B | 0.9700 |
| C2—C3 | 1.484 (5) | C13—C17 | 1.527 (4) |
| C2—H2A | 0.9700 | C13—C15 | 1.531 (4) |
| C2—H2B | 0.9700 | C13—C14 | 1.556 (4) |
| C3—C4 | 1.446 (4) | C14—H14A | 0.9700 |
| C4—C18 | 1.350 (4) | C14—H14B | 0.9700 |
| C4—C5 | 1.515 (4) | C15—C16 | 1.508 (4) |
| C5—C6 | 1.531 (4) | C16—H16A | 0.9700 |
| C5—C19 | 1.547 (4) | C16—H16B | 0.9700 |
| C5—C10 | 1.563 (4) | C17—H17A | 0.9600 |
| C6—C7 | 1.525 (4) | C17—H17B | 0.9600 |
| C6—H6A | 0.9700 | C17—H17C | 0.9600 |
| C6—H6B | 0.9700 | C18—H18A | 0.9300 |
| C7—C8 | 1.525 (4) | C19—H19A | 0.9600 |
| C7—H7A | 0.9700 | C19—H19B | 0.9600 |
| C7—H7B | 0.9700 | C19—H19C | 0.9600 |
| C8—C14 | 1.531 (4) | C20—H20A | 0.9600 |
| C8—C9 | 1.540 (4) | C20—H20B | 0.9600 |
| C8—H8A | 0.9800 | C20—H20C | 0.9600 |
| C18—O2—H1O2 | 109.5 | C5—C10—H10A | 105.5 |
| C16—O4—H1O4 | 109.5 | C12—C11—C9 | 113.5 (2) |
| C2—C1—C10 | 116.4 (3) | C12—C11—H11A | 108.9 |
| C2—C1—H1A | 108.2 | C9—C11—H11A | 108.9 |
| C10—C1—H1A | 108.2 | C12—C11—H11B | 108.9 |
| C2—C1—H1B | 108.2 | C9—C11—H11B | 108.9 |
| C10—C1—H1B | 108.2 | H11A—C11—H11B | 107.7 |
| H1A—C1—H1B | 107.3 | C13—C12—C11 | 113.7 (3) |
| C3—C2—C1 | 117.4 (3) | C13—C12—H12A | 108.8 |
| C3—C2—H2A | 107.9 | C11—C12—H12A | 108.8 |
| C1—C2—H2A | 107.9 | C13—C12—H12B | 108.8 |
| C3—C2—H2B | 107.9 | C11—C12—H12B | 108.8 |
| C1—C2—H2B | 107.9 | H12A—C12—H12B | 107.7 |
| H2A—C2—H2B | 107.2 | C17—C13—C15 | 111.0 (2) |
| O1—C3—C4 | 121.1 (3) | C17—C13—C12 | 110.1 (3) |
| O1—C3—C2 | 119.2 (3) | C15—C13—C12 | 109.7 (2) |
| C4—C3—C2 | 119.7 (3) | C17—C13—C14 | 111.2 (3) |
| C18—C4—C3 | 117.0 (3) | C15—C13—C14 | 104.7 (2) |
| C18—C4—C5 | 123.4 (3) | C12—C13—C14 | 110.2 (2) |
| C3—C4—C5 | 119.6 (3) | C8—C14—C13 | 112.6 (2) |
| C4—C5—C6 | 112.6 (2) | C8—C14—H14A | 109.1 |
| C4—C5—C19 | 108.5 (2) | C13—C14—H14A | 109.1 |
| C6—C5—C19 | 107.4 (2) | C8—C14—H14B | 109.1 |
| C4—C5—C10 | 109.8 (2) | C13—C14—H14B | 109.1 |
| C6—C5—C10 | 109.0 (2) | H14A—C14—H14B | 107.8 |
| C19—C5—C10 | 109.4 (2) | O3—C15—C16 | 118.9 (3) |
| C7—C6—C5 | 113.8 (2) | O3—C15—C13 | 122.2 (3) |
| C7—C6—H6A | 108.8 | C16—C15—C13 | 118.8 (3) |
| C5—C6—H6A | 108.8 | O4—C16—C15 | 113.8 (3) |
| C7—C6—H6B | 108.8 | O4—C16—H16A | 108.8 |
| C5—C6—H6B | 108.8 | C15—C16—H16A | 108.8 |
| H6A—C6—H6B | 107.7 | O4—C16—H16B | 108.8 |
| C6—C7—C8 | 109.5 (3) | C15—C16—H16B | 108.8 |
| C6—C7—H7A | 109.8 | H16A—C16—H16B | 107.7 |
| C8—C7—H7A | 109.8 | C13—C17—H17A | 109.5 |
| C6—C7—H7B | 109.8 | C13—C17—H17B | 109.5 |
| C8—C7—H7B | 109.8 | H17A—C17—H17B | 109.5 |
| H7A—C7—H7B | 108.2 | C13—C17—H17C | 109.5 |
| C7—C8—C14 | 111.9 (2) | H17A—C17—H17C | 109.5 |
| C7—C8—C9 | 112.3 (2) | H17B—C17—H17C | 109.5 |
| C14—C8—C9 | 112.6 (2) | O2—C18—C4 | 123.4 (3) |
| C7—C8—H8A | 106.5 | O2—C18—H18A | 118.3 |
| C14—C8—H8A | 106.5 | C4—C18—H18A | 118.3 |
| C9—C8—H8A | 106.5 | C5—C19—H19A | 109.5 |
| C20—C9—C8 | 111.5 (2) | C5—C19—H19B | 109.5 |
| C20—C9—C11 | 107.9 (2) | H19A—C19—H19B | 109.5 |
| C8—C9—C11 | 106.8 (2) | C5—C19—H19C | 109.5 |
| C20—C9—C10 | 112.4 (2) | H19A—C19—H19C | 109.5 |
| C8—C9—C10 | 108.6 (2) | H19B—C19—H19C | 109.5 |
| C11—C9—C10 | 109.5 (2) | C9—C20—H20A | 109.5 |
| C1—C10—C9 | 114.5 (2) | C9—C20—H20B | 109.5 |
| C1—C10—C5 | 110.2 (2) | H20A—C20—H20B | 109.5 |
| C9—C10—C5 | 114.9 (2) | C9—C20—H20C | 109.5 |
| C1—C10—H10A | 105.5 | H20A—C20—H20C | 109.5 |
| C9—C10—H10A | 105.5 | H20B—C20—H20C | 109.5 |
| C10—C1—C2—C3 | −0.2 (4) | C8—C9—C10—C5 | −52.4 (3) |
| C1—C2—C3—O1 | −157.0 (3) | C11—C9—C10—C5 | −168.7 (3) |
| C1—C2—C3—C4 | 23.7 (4) | C4—C5—C10—C1 | 57.8 (3) |
| O1—C3—C4—C18 | −4.4 (4) | C6—C5—C10—C1 | −178.4 (2) |
| C2—C3—C4—C18 | 175.0 (3) | C19—C5—C10—C1 | −61.2 (3) |
| O1—C3—C4—C5 | 177.0 (2) | C4—C5—C10—C9 | −73.3 (3) |
| C2—C3—C4—C5 | −3.6 (4) | C6—C5—C10—C9 | 50.6 (3) |
| C18—C4—C5—C6 | 22.3 (4) | C19—C5—C10—C9 | 167.7 (2) |
| C3—C4—C5—C6 | −159.2 (2) | C20—C9—C11—C12 | −64.2 (3) |
| C18—C4—C5—C19 | −96.4 (3) | C8—C9—C11—C12 | 55.8 (3) |
| C3—C4—C5—C19 | 82.1 (3) | C10—C9—C11—C12 | 173.2 (3) |
| C18—C4—C5—C10 | 144.0 (3) | C9—C11—C12—C13 | −53.6 (4) |
| C3—C4—C5—C10 | −37.5 (3) | C11—C12—C13—C17 | −74.3 (3) |
| C4—C5—C6—C7 | 69.2 (3) | C11—C12—C13—C15 | 163.3 (3) |
| C19—C5—C6—C7 | −171.3 (3) | C11—C12—C13—C14 | 48.6 (3) |
| C10—C5—C6—C7 | −52.9 (3) | C7—C8—C14—C13 | −174.0 (2) |
| C5—C6—C7—C8 | 58.1 (3) | C9—C8—C14—C13 | 58.3 (3) |
| C6—C7—C8—C14 | 172.7 (2) | C17—C13—C14—C8 | 71.3 (3) |
| C6—C7—C8—C9 | −59.5 (3) | C15—C13—C14—C8 | −168.8 (2) |
| C7—C8—C9—C20 | −68.1 (3) | C12—C13—C14—C8 | −51.0 (3) |
| C14—C8—C9—C20 | 59.3 (3) | C17—C13—C15—O3 | −151.8 (4) |
| C7—C8—C9—C11 | 174.2 (2) | C12—C13—C15—O3 | −30.0 (4) |
| C14—C8—C9—C11 | −58.4 (3) | C14—C13—C15—O3 | 88.2 (4) |
| C7—C8—C9—C10 | 56.2 (3) | C17—C13—C15—C16 | 31.0 (4) |
| C14—C8—C9—C10 | −176.4 (2) | C12—C13—C15—C16 | 152.8 (3) |
| C2—C1—C10—C9 | 91.3 (3) | C14—C13—C15—C16 | −89.0 (3) |
| C2—C1—C10—C5 | −40.0 (3) | O3—C15—C16—O4 | −11.1 (5) |
| C20—C9—C10—C1 | −57.5 (3) | C13—C15—C16—O4 | 166.3 (3) |
| C8—C9—C10—C1 | 178.7 (2) | C3—C4—C18—O2 | 4.4 (5) |
| C11—C9—C10—C1 | 62.4 (3) | C5—C4—C18—O2 | −177.1 (3) |
| C20—C9—C10—C5 | 71.4 (3) |
| H··· | ||||
| O2—H1O2···O1 | 0.82 | 1.69 | 2.424 (4) | 148 |
| O4—H1O4···O1i | 0.82 | 2.07 | 2.841 (3) | 156 |
| C1—H1B···O2ii | 0.97 | 2.48 | 3.368 (5) | 152 |
| C12—H12A···O3 | 0.97 | 2.41 | 2.799 (4) | 103 |
| C17—H17A···O4iii | 0.96 | 2.53 | 3.460 (5) | 164 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H1 | 0.82 | 1.69 | 2.424 (4) | 148 |
| O4—H1 | 0.82 | 2.07 | 2.841 (3) | 156 |
| C1—H1 | 0.97 | 2.48 | 3.368 (5) | 152 |
| C12—H12 | 0.97 | 2.41 | 2.799 (4) | 103 |
| C17—H17 | 0.96 | 2.53 | 3.460 (5) | 164 |
Symmetry codes: (i) ; (ii) ; (iii) .