| Literature DB >> 21589072 |
Sammer Yousuf, Salman Zafar, Muhammed Iqbal Choudhary, Seik Weng Ng.
Abstract
The title compound, C(19)H(28)O(3), the fungal-transformed metabolite of the steroid methyl-oestrenol contains four fused rings A, B, C and D. Ring A adopts a half-chair and the trans-fused rings B and C adopt chair confirmations; the five-membered D ring is folded like an envelope. In the crystal, adjacent mol-ecules are linked by O-H⋯O(carbon-yl) and O-H⋯O(hy-droxy) hydrogen bonds into a layer structure.Entities:
Year: 2010 PMID: 21589072 PMCID: PMC3009298 DOI: 10.1107/S160053681004033X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H28O3 | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 2043 reflections |
| θ = 2.5–21.3° | |
| µ = 0.08 mm−1 | |
| Prism, colorless | |
| 0.35 × 0.20 × 0.10 mm |
| Bruker SMART APEX CCD diffractometer | 1799 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 2.2° |
| ω scans | |
| 11685 measured reflections | |
| 2203 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2203 reflections | (Δ/σ)max = 0.001 |
| 207 parameters | Δρmax = 0.19 e Å−3 |
| 2 restraints | Δρmin = −0.28 e Å−3 |
| O1 | 0.5961 (3) | 1.11961 (17) | 1.13914 (18) | 0.0682 (7) | |
| O2 | 0.39264 (19) | 0.32100 (16) | 1.04677 (15) | 0.0492 (5) | |
| O3 | 0.6378 (2) | 0.26561 (14) | 0.97416 (16) | 0.0462 (5) | |
| C1 | 0.6147 (3) | 0.8388 (2) | 1.17666 (19) | 0.0464 (7) | |
| H1A | 0.5176 | 0.8385 | 1.1722 | 0.056* | |
| H1B | 0.6408 | 0.7906 | 1.2297 | 0.056* | |
| C2 | 0.6631 (3) | 0.9507 (2) | 1.2017 (2) | 0.0506 (7) | |
| H2A | 0.6235 | 0.9734 | 1.2643 | 0.061* | |
| H2B | 0.7598 | 0.9503 | 1.2097 | 0.061* | |
| C3 | 0.6256 (3) | 1.0271 (2) | 1.1211 (2) | 0.0451 (6) | |
| C4 | 0.6340 (3) | 0.9862 (2) | 1.0191 (2) | 0.0420 (6) | |
| H4 | 0.6185 | 1.0328 | 0.9666 | 0.050* | |
| C5 | 0.6628 (2) | 0.88515 (19) | 0.99789 (19) | 0.0356 (6) | |
| C6 | 0.6928 (3) | 0.8510 (2) | 0.89256 (19) | 0.0438 (7) | |
| H6A | 0.7893 | 0.8480 | 0.8839 | 0.053* | |
| H6B | 0.6584 | 0.9044 | 0.8471 | 0.053* | |
| C7 | 0.6336 (3) | 0.74360 (19) | 0.86388 (19) | 0.0445 (7) | |
| H7A | 0.6689 | 0.7220 | 0.7995 | 0.053* | |
| H7B | 0.5370 | 0.7499 | 0.8579 | 0.053* | |
| C8 | 0.6673 (3) | 0.65901 (18) | 0.94171 (18) | 0.0333 (5) | |
| H8 | 0.7651 | 0.6532 | 0.9468 | 0.040* | |
| C9 | 0.6117 (3) | 0.69403 (18) | 1.04371 (16) | 0.0310 (5) | |
| H9 | 0.5153 | 0.7064 | 1.0350 | 0.037* | |
| C10 | 0.6743 (3) | 0.80063 (18) | 1.07782 (17) | 0.0329 (5) | |
| H10 | 0.7701 | 0.7879 | 1.0890 | 0.040* | |
| C11 | 0.6269 (3) | 0.60786 (18) | 1.12419 (19) | 0.0393 (6) | |
| H11A | 0.7209 | 0.6015 | 1.1418 | 0.047* | |
| H11B | 0.5785 | 0.6298 | 1.1835 | 0.047* | |
| C12 | 0.5748 (3) | 0.49914 (18) | 1.09091 (16) | 0.0342 (6) | |
| H12A | 0.5940 | 0.4470 | 1.1423 | 0.041* | |
| H12B | 0.4782 | 0.5026 | 1.0826 | 0.041* | |
| C13 | 0.6389 (2) | 0.46399 (18) | 0.99316 (17) | 0.0306 (5) | |
| C14 | 0.6106 (3) | 0.55026 (19) | 0.91475 (17) | 0.0336 (5) | |
| H14 | 0.5129 | 0.5584 | 0.9116 | 0.040* | |
| C15 | 0.6536 (4) | 0.4988 (2) | 0.8161 (2) | 0.0542 (8) | |
| H15A | 0.7488 | 0.5087 | 0.8044 | 0.065* | |
| H15B | 0.6040 | 0.5285 | 0.7604 | 0.065* | |
| C16 | 0.6199 (3) | 0.3807 (2) | 0.8303 (2) | 0.0525 (7) | |
| H16A | 0.6973 | 0.3373 | 0.8140 | 0.063* | |
| H16B | 0.5466 | 0.3605 | 0.7867 | 0.063* | |
| C17 | 0.5796 (2) | 0.36350 (19) | 0.94063 (18) | 0.0343 (5) | |
| C18 | 0.7903 (3) | 0.4452 (2) | 1.0088 (2) | 0.0494 (7) | |
| H18B | 0.8291 | 0.5060 | 1.0412 | 0.074* | |
| H18C | 0.8329 | 0.4345 | 0.9454 | 0.074* | |
| H18D | 0.8033 | 0.3835 | 1.0498 | 0.074* | |
| C19 | 0.4282 (3) | 0.3522 (2) | 0.9490 (2) | 0.0419 (6) | |
| H19A | 0.3857 | 0.4195 | 0.9331 | 0.050* | |
| H19B | 0.3968 | 0.2996 | 0.9016 | 0.050* | |
| H2 | 0.3200 (19) | 0.288 (2) | 1.041 (2) | 0.065 (10)* | |
| H3 | 0.595 (4) | 0.242 (3) | 1.023 (2) | 0.098 (16)* |
| O1 | 0.0825 (17) | 0.0374 (11) | 0.0847 (16) | 0.0077 (11) | 0.0139 (13) | −0.0098 (11) |
| O2 | 0.0399 (11) | 0.0470 (11) | 0.0606 (13) | −0.0140 (9) | 0.0059 (9) | 0.0023 (9) |
| O3 | 0.0407 (11) | 0.0276 (9) | 0.0702 (15) | 0.0056 (8) | 0.0070 (10) | 0.0029 (9) |
| C1 | 0.0666 (19) | 0.0341 (14) | 0.0384 (14) | −0.0083 (13) | 0.0058 (13) | −0.0056 (11) |
| C2 | 0.064 (2) | 0.0374 (14) | 0.0500 (17) | −0.0081 (14) | 0.0078 (15) | −0.0113 (12) |
| C3 | 0.0394 (14) | 0.0333 (14) | 0.0627 (17) | −0.0052 (12) | 0.0067 (13) | −0.0055 (12) |
| C4 | 0.0438 (15) | 0.0303 (13) | 0.0520 (15) | −0.0035 (11) | −0.0025 (13) | 0.0058 (11) |
| C5 | 0.0342 (13) | 0.0307 (12) | 0.0418 (14) | −0.0074 (10) | 0.0000 (11) | 0.0038 (10) |
| C6 | 0.0580 (17) | 0.0341 (14) | 0.0395 (14) | −0.0086 (13) | 0.0047 (12) | 0.0086 (11) |
| C7 | 0.0672 (19) | 0.0362 (14) | 0.0300 (13) | −0.0089 (14) | −0.0019 (13) | 0.0038 (10) |
| C8 | 0.0377 (12) | 0.0302 (12) | 0.0319 (12) | −0.0034 (10) | 0.0021 (10) | 0.0003 (9) |
| C9 | 0.0335 (12) | 0.0270 (11) | 0.0326 (12) | −0.0035 (10) | 0.0008 (10) | 0.0013 (9) |
| C10 | 0.0375 (13) | 0.0287 (12) | 0.0325 (13) | −0.0033 (10) | −0.0022 (10) | −0.0002 (9) |
| C11 | 0.0582 (17) | 0.0310 (12) | 0.0288 (12) | −0.0027 (12) | −0.0022 (12) | 0.0035 (9) |
| C12 | 0.0461 (15) | 0.0276 (12) | 0.0291 (12) | −0.0033 (11) | 0.0013 (10) | 0.0052 (9) |
| C13 | 0.0276 (12) | 0.0288 (11) | 0.0354 (13) | −0.0004 (10) | 0.0002 (10) | −0.0006 (9) |
| C14 | 0.0392 (13) | 0.0312 (12) | 0.0305 (12) | −0.0036 (11) | 0.0015 (10) | −0.0007 (9) |
| C15 | 0.085 (2) | 0.0407 (15) | 0.0373 (15) | −0.0107 (16) | 0.0157 (15) | −0.0060 (12) |
| C16 | 0.071 (2) | 0.0397 (15) | 0.0470 (16) | −0.0072 (15) | 0.0116 (15) | −0.0112 (13) |
| C17 | 0.0348 (12) | 0.0263 (12) | 0.0417 (13) | 0.0010 (10) | 0.0006 (11) | −0.0003 (10) |
| C18 | 0.0350 (15) | 0.0390 (15) | 0.074 (2) | 0.0006 (12) | −0.0044 (14) | −0.0035 (14) |
| C19 | 0.0380 (13) | 0.0345 (14) | 0.0532 (15) | −0.0042 (11) | −0.0071 (12) | 0.0012 (12) |
| O1—C3 | 1.225 (3) | C9—C10 | 1.549 (3) |
| O2—C19 | 1.413 (3) | C9—H9 | 0.9800 |
| O2—H2 | 0.84 (3) | C10—H10 | 0.9800 |
| O3—C17 | 1.434 (3) | C11—C12 | 1.530 (3) |
| O3—H3 | 0.84 (3) | C11—H11A | 0.9700 |
| C1—C2 | 1.526 (4) | C11—H11B | 0.9700 |
| C1—C10 | 1.529 (3) | C12—C13 | 1.523 (3) |
| C1—H1A | 0.9700 | C12—H12A | 0.9700 |
| C1—H1B | 0.9700 | C12—H12B | 0.9700 |
| C2—C3 | 1.493 (4) | C13—C14 | 1.537 (3) |
| C2—H2A | 0.9700 | C13—C18 | 1.543 (3) |
| C2—H2B | 0.9700 | C13—C17 | 1.563 (3) |
| C3—C4 | 1.463 (4) | C14—C15 | 1.533 (3) |
| C4—C5 | 1.334 (4) | C14—H14 | 0.9800 |
| C4—H4 | 0.9300 | C15—C16 | 1.536 (4) |
| C5—C6 | 1.505 (4) | C15—H15A | 0.9700 |
| C5—C10 | 1.514 (3) | C15—H15B | 0.9700 |
| C6—C7 | 1.524 (3) | C16—C17 | 1.546 (4) |
| C6—H6A | 0.9700 | C16—H16A | 0.9700 |
| C6—H6B | 0.9700 | C16—H16B | 0.9700 |
| C7—C8 | 1.527 (3) | C17—C19 | 1.520 (3) |
| C7—H7A | 0.9700 | C18—H18B | 0.9600 |
| C7—H7B | 0.9700 | C18—H18C | 0.9600 |
| C8—C14 | 1.524 (3) | C18—H18D | 0.9600 |
| C8—C9 | 1.539 (3) | C19—H19A | 0.9700 |
| C8—H8 | 0.9800 | C19—H19B | 0.9700 |
| C9—C11 | 1.537 (3) | ||
| C19—O2—H2 | 106 (2) | C12—C11—H11A | 108.9 |
| C17—O3—H3 | 110 (3) | C9—C11—H11A | 108.9 |
| C2—C1—C10 | 111.0 (2) | C12—C11—H11B | 108.9 |
| C2—C1—H1A | 109.4 | C9—C11—H11B | 108.9 |
| C10—C1—H1A | 109.4 | H11A—C11—H11B | 107.8 |
| C2—C1—H1B | 109.4 | C13—C12—C11 | 111.6 (2) |
| C10—C1—H1B | 109.4 | C13—C12—H12A | 109.3 |
| H1A—C1—H1B | 108.0 | C11—C12—H12A | 109.3 |
| C3—C2—C1 | 110.9 (2) | C13—C12—H12B | 109.3 |
| C3—C2—H2A | 109.5 | C11—C12—H12B | 109.3 |
| C1—C2—H2A | 109.5 | H12A—C12—H12B | 108.0 |
| C3—C2—H2B | 109.5 | C12—C13—C14 | 107.80 (19) |
| C1—C2—H2B | 109.5 | C12—C13—C18 | 109.8 (2) |
| H2A—C2—H2B | 108.1 | C14—C13—C18 | 112.4 (2) |
| O1—C3—C4 | 122.2 (3) | C12—C13—C17 | 117.6 (2) |
| O1—C3—C2 | 122.0 (3) | C14—C13—C17 | 101.23 (18) |
| C4—C3—C2 | 115.7 (2) | C18—C13—C17 | 107.9 (2) |
| C5—C4—C3 | 123.2 (3) | C8—C14—C15 | 118.7 (2) |
| C5—C4—H4 | 118.4 | C8—C14—C13 | 113.9 (2) |
| C3—C4—H4 | 118.4 | C15—C14—C13 | 103.9 (2) |
| C4—C5—C6 | 121.0 (2) | C8—C14—H14 | 106.5 |
| C4—C5—C10 | 122.3 (2) | C15—C14—H14 | 106.5 |
| C6—C5—C10 | 116.6 (2) | C13—C14—H14 | 106.5 |
| C5—C6—C7 | 114.4 (2) | C14—C15—C16 | 103.9 (2) |
| C5—C6—H6A | 108.7 | C14—C15—H15A | 111.0 |
| C7—C6—H6A | 108.7 | C16—C15—H15A | 111.0 |
| C5—C6—H6B | 108.7 | C14—C15—H15B | 111.0 |
| C7—C6—H6B | 108.7 | C16—C15—H15B | 111.0 |
| H6A—C6—H6B | 107.6 | H15A—C15—H15B | 109.0 |
| C6—C7—C8 | 111.2 (2) | C15—C16—C17 | 108.1 (2) |
| C6—C7—H7A | 109.4 | C15—C16—H16A | 110.1 |
| C8—C7—H7A | 109.4 | C17—C16—H16A | 110.1 |
| C6—C7—H7B | 109.4 | C15—C16—H16B | 110.1 |
| C8—C7—H7B | 109.4 | C17—C16—H16B | 110.1 |
| H7A—C7—H7B | 108.0 | H16A—C16—H16B | 108.4 |
| C14—C8—C7 | 112.5 (2) | O3—C17—C19 | 107.4 (2) |
| C14—C8—C9 | 109.51 (19) | O3—C17—C16 | 108.3 (2) |
| C7—C8—C9 | 109.1 (2) | C19—C17—C16 | 110.0 (2) |
| C14—C8—H8 | 108.5 | O3—C17—C13 | 113.66 (19) |
| C7—C8—H8 | 108.5 | C19—C17—C13 | 114.7 (2) |
| C9—C8—H8 | 108.5 | C16—C17—C13 | 102.65 (19) |
| C11—C9—C8 | 112.66 (19) | C13—C18—H18B | 109.5 |
| C11—C9—C10 | 111.39 (19) | C13—C18—H18C | 109.5 |
| C8—C9—C10 | 111.39 (19) | H18B—C18—H18C | 109.5 |
| C11—C9—H9 | 107.0 | C13—C18—H18D | 109.5 |
| C8—C9—H9 | 107.0 | H18B—C18—H18D | 109.5 |
| C10—C9—H9 | 107.0 | H18C—C18—H18D | 109.5 |
| C5—C10—C1 | 111.2 (2) | O2—C19—C17 | 110.1 (2) |
| C5—C10—C9 | 111.69 (19) | O2—C19—H19A | 109.6 |
| C1—C10—C9 | 111.8 (2) | C17—C19—H19A | 109.6 |
| C5—C10—H10 | 107.3 | O2—C19—H19B | 109.6 |
| C1—C10—H10 | 107.3 | C17—C19—H19B | 109.6 |
| C9—C10—H10 | 107.3 | H19A—C19—H19B | 108.2 |
| C12—C11—C9 | 113.1 (2) | ||
| C10—C1—C2—C3 | 58.7 (3) | C11—C12—C13—C18 | 65.7 (3) |
| C1—C2—C3—O1 | 145.9 (3) | C11—C12—C13—C17 | −170.4 (2) |
| C1—C2—C3—C4 | −37.6 (4) | C7—C8—C14—C15 | 59.1 (3) |
| O1—C3—C4—C5 | −178.4 (3) | C9—C8—C14—C15 | −179.4 (2) |
| C2—C3—C4—C5 | 5.1 (4) | C7—C8—C14—C13 | −178.2 (2) |
| C3—C4—C5—C6 | −169.7 (3) | C9—C8—C14—C13 | −56.7 (3) |
| C3—C4—C5—C10 | 7.0 (4) | C12—C13—C14—C8 | 60.2 (3) |
| C4—C5—C6—C7 | −140.6 (3) | C18—C13—C14—C8 | −60.9 (3) |
| C10—C5—C6—C7 | 42.5 (3) | C17—C13—C14—C8 | −175.7 (2) |
| C5—C6—C7—C8 | −50.0 (3) | C12—C13—C14—C15 | −169.2 (2) |
| C6—C7—C8—C14 | −179.5 (2) | C18—C13—C14—C15 | 69.7 (3) |
| C6—C7—C8—C9 | 58.8 (3) | C17—C13—C14—C15 | −45.2 (2) |
| C14—C8—C9—C11 | 50.0 (3) | C8—C14—C15—C16 | 161.0 (2) |
| C7—C8—C9—C11 | 173.5 (2) | C13—C14—C15—C16 | 33.4 (3) |
| C14—C8—C9—C10 | 175.97 (19) | C14—C15—C16—C17 | −8.6 (3) |
| C7—C8—C9—C10 | −60.5 (3) | C15—C16—C17—O3 | −139.3 (3) |
| C4—C5—C10—C1 | 14.6 (4) | C15—C16—C17—C19 | 103.6 (3) |
| C6—C5—C10—C1 | −168.6 (2) | C15—C16—C17—C13 | −18.8 (3) |
| C4—C5—C10—C9 | 140.3 (2) | C12—C13—C17—O3 | −87.4 (3) |
| C6—C5—C10—C9 | −42.9 (3) | C14—C13—C17—O3 | 155.4 (2) |
| C2—C1—C10—C5 | −46.5 (3) | C18—C13—C17—O3 | 37.3 (3) |
| C2—C1—C10—C9 | −172.2 (2) | C12—C13—C17—C19 | 36.6 (3) |
| C11—C9—C10—C5 | 178.6 (2) | C14—C13—C17—C19 | −80.5 (2) |
| C8—C9—C10—C5 | 51.9 (3) | C18—C13—C17—C19 | 161.3 (2) |
| C11—C9—C10—C1 | −56.0 (3) | C12—C13—C17—C16 | 155.8 (2) |
| C8—C9—C10—C1 | 177.2 (2) | C14—C13—C17—C16 | 38.7 (2) |
| C8—C9—C11—C12 | −50.1 (3) | C18—C13—C17—C16 | −79.5 (3) |
| C10—C9—C11—C12 | −176.1 (2) | O3—C17—C19—O2 | 53.7 (3) |
| C9—C11—C12—C13 | 54.1 (3) | C16—C17—C19—O2 | 171.4 (2) |
| C11—C12—C13—C14 | −56.9 (3) | C13—C17—C19—O2 | −73.6 (3) |
| H··· | ||||
| O2—H2···O3i | 0.84 (3) | 1.95 (3) | 2.779 (3) | 171 (3) |
| O3—H3···O1ii | 0.84 (3) | 2.18 (3) | 2.904 (3) | 144 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2⋯O3i | 0.84 (3) | 1.95 (3) | 2.779 (3) | 171 (3) |
| O3—H3⋯O1ii | 0.84 (3) | 2.18 (3) | 2.904 (3) | 144 (4) |
Symmetry codes: (i) ; (ii) .