Literature DB >> 21588967

5-(2,3,4,5,6-Penta-fluoro-phen-yl)-1,3,4-thia-diazol-2-amine.

Peng Wang1, Rong Wan, Jianqiang Zhang, Peng Yu, Qiu He.   

Abstract

The title compound, C(8)H(2)F(5)N(3)S, was synthesized by the reaction of perfluoro-benzoic acid and thio-semicarbazide. The dihedral angle between the thia-diazole and perfluoro-phenyl ring is 35.41 (6)°. In the crystal, inter-molecular N-H⋯N hydrogen bonds link the mol-ecules, forming a three-dimensional network.

Entities:  

Year:  2010        PMID: 21588967      PMCID: PMC3009109          DOI: 10.1107/S1600536810039723

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the fungicidal and herbicidal activity of thia­diazole deriv­atives, see: Chen et al. (2000 ▶); Kidwai et al. (2000 ▶); Vicentini et al. (1998 ▶) and for their insecticidal activity, see: Arun et al. (1999 ▶); Wasfy et al. (1996 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C8H2F5N3S M = 267.19 Monoclinic, a = 11.897 (2) Å b = 7.0680 (14) Å c = 11.553 (2) Å β = 104.66 (3)° V = 939.8 (3) Å3 Z = 4 Mo Kα radiation μ = 0.40 mm−1 T = 293 K 0.30 × 0.20 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.889, T max = 0.961 3428 measured reflections 1709 independent reflections 1283 reflections with I > 2σ(I) R int = 0.064 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.128 S = 1.00 1709 reflections 154 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810039723/er2081sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810039723/er2081Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H2F5N3SF(000) = 528
Mr = 267.19Dx = 1.888 Mg m3
Monoclinic, P21/cMelting point = 523–525 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 11.897 (2) ÅCell parameters from 25 reflections
b = 7.0680 (14) Åθ = 9–13°
c = 11.553 (2) ŵ = 0.40 mm1
β = 104.66 (3)°T = 293 K
V = 939.8 (3) Å3Block, colorless
Z = 40.30 × 0.20 × 0.10 mm
Enraf–Nonius CAD-4 diffractometer1283 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.064
graphiteθmax = 25.3°, θmin = 1.8°
ω/2θ scansh = −14→0
Absorption correction: ψ scan (North et al., 1968)k = −8→8
Tmin = 0.889, Tmax = 0.961l = −13→13
3428 measured reflections3 standard reflections every 200 reflections
1709 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.128H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.080P)2] where P = (Fo2 + 2Fc2)/3
1709 reflections(Δ/σ)max < 0.001
154 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.82940 (7)0.06662 (10)0.05893 (6)0.0461 (3)
F10.78775 (15)−0.3360 (2)−0.00245 (14)0.0569 (5)
C10.9155 (2)0.2602 (4)0.0479 (2)0.0404 (6)
N10.9659 (2)0.3683 (4)0.1416 (2)0.0524 (6)
H1A1.01050.46010.13300.063*
H1B0.95370.34590.21060.063*
C20.8165 (2)0.0294 (4)−0.0925 (2)0.0389 (6)
F20.65099 (17)−0.6042 (2)−0.12921 (18)0.0685 (6)
N20.9298 (2)0.2855 (4)−0.06011 (19)0.0472 (6)
F30.53266 (17)−0.5342 (3)−0.35867 (18)0.0747 (6)
N30.8725 (2)0.1519 (3)−0.13946 (19)0.0451 (6)
C30.7437 (2)−0.1198 (4)−0.1630 (2)0.0387 (6)
F40.55308 (16)−0.1942 (3)−0.45890 (14)0.0689 (6)
C40.7312 (2)−0.2972 (4)−0.1154 (2)0.0429 (6)
F50.68393 (17)0.0780 (2)−0.33282 (15)0.0609 (5)
C50.6609 (3)−0.4358 (4)−0.1800 (3)0.0489 (7)
C60.6009 (2)−0.4016 (4)−0.2954 (3)0.0502 (7)
C70.6116 (2)−0.2282 (4)−0.3459 (2)0.0482 (7)
C80.6812 (2)−0.0900 (4)−0.2800 (2)0.0453 (7)
U11U22U33U12U13U23
S0.0633 (5)0.0429 (4)0.0347 (4)−0.0129 (3)0.0171 (3)−0.0005 (3)
F10.0665 (10)0.0469 (10)0.0521 (10)−0.0049 (8)0.0052 (8)0.0130 (8)
C10.0472 (14)0.0406 (15)0.0352 (13)−0.0044 (12)0.0139 (12)−0.0027 (11)
N10.0725 (16)0.0530 (15)0.0339 (12)−0.0221 (13)0.0176 (11)−0.0081 (10)
C20.0477 (14)0.0358 (14)0.0354 (13)−0.0023 (11)0.0147 (12)−0.0012 (11)
F20.0801 (13)0.0418 (10)0.0824 (14)−0.0148 (9)0.0184 (11)0.0058 (9)
N20.0600 (14)0.0494 (14)0.0368 (12)−0.0185 (11)0.0206 (11)−0.0092 (10)
F30.0815 (13)0.0659 (13)0.0740 (13)−0.0330 (10)0.0145 (11)−0.0233 (10)
N30.0586 (14)0.0442 (13)0.0362 (12)−0.0136 (11)0.0191 (11)−0.0087 (10)
C30.0450 (14)0.0351 (14)0.0378 (13)−0.0027 (11)0.0139 (11)−0.0040 (11)
F40.0762 (12)0.0821 (14)0.0411 (9)−0.0162 (11)0.0012 (8)−0.0056 (9)
C40.0458 (15)0.0405 (15)0.0426 (15)−0.0010 (12)0.0114 (12)0.0025 (12)
F50.0840 (12)0.0443 (10)0.0477 (10)−0.0082 (9)0.0041 (9)0.0086 (7)
C50.0553 (16)0.0349 (15)0.0603 (18)−0.0060 (13)0.0217 (14)−0.0005 (13)
C60.0508 (16)0.0486 (17)0.0531 (17)−0.0159 (14)0.0165 (14)−0.0172 (13)
C70.0492 (16)0.0547 (18)0.0406 (15)−0.0051 (13)0.0108 (13)−0.0087 (13)
C80.0542 (16)0.0404 (15)0.0429 (15)−0.0015 (12)0.0155 (13)−0.0008 (11)
S—C11.733 (3)N2—N31.372 (3)
S—C21.737 (3)F3—C61.331 (3)
F1—C41.336 (3)C3—C81.383 (4)
C1—N21.313 (3)C3—C41.392 (4)
C1—N11.337 (3)F4—C71.336 (3)
N1—H1A0.8600C4—C51.379 (4)
N1—H1B0.8600F5—C81.339 (3)
C2—N31.292 (3)C5—C61.365 (5)
C2—C31.473 (4)C6—C71.377 (4)
F2—C51.345 (3)C7—C81.379 (4)
C1—S—C287.05 (12)F1—C4—C5118.0 (3)
N2—C1—N1123.5 (2)F1—C4—C3119.5 (2)
N2—C1—S113.5 (2)C5—C4—C3122.4 (3)
N1—C1—S122.92 (19)F2—C5—C6120.1 (3)
C1—N1—H1A120.0F2—C5—C4120.0 (3)
C1—N1—H1B120.0C6—C5—C4119.9 (3)
H1A—N1—H1B120.0F3—C6—C5120.5 (3)
N3—C2—C3122.8 (2)F3—C6—C7120.2 (3)
N3—C2—S113.4 (2)C5—C6—C7119.3 (2)
C3—C2—S123.72 (19)F4—C7—C6119.5 (2)
C1—N2—N3112.3 (2)F4—C7—C8120.3 (3)
C2—N3—N2113.8 (2)C6—C7—C8120.2 (3)
C8—C3—C4116.0 (2)F5—C8—C7117.2 (2)
C8—C3—C2121.8 (2)F5—C8—C3120.8 (2)
C4—C3—C2122.2 (2)C7—C8—C3122.1 (3)
C2—S—C1—N2−0.2 (2)F1—C4—C5—C6179.5 (3)
C2—S—C1—N1−177.7 (3)C3—C4—C5—C60.3 (4)
C1—S—C2—N30.2 (2)F2—C5—C6—F3−0.4 (4)
C1—S—C2—C3−176.3 (2)C4—C5—C6—F3−179.9 (3)
N1—C1—N2—N3177.7 (3)F2—C5—C6—C7179.7 (2)
S—C1—N2—N30.2 (3)C4—C5—C6—C70.2 (4)
C3—C2—N3—N2176.4 (2)F3—C6—C7—F40.0 (4)
S—C2—N3—N2−0.2 (3)C5—C6—C7—F4179.9 (3)
C1—N2—N3—C20.0 (4)F3—C6—C7—C8179.3 (3)
N3—C2—C3—C8−34.3 (4)C5—C6—C7—C8−0.8 (4)
S—C2—C3—C8141.9 (2)F4—C7—C8—F52.1 (4)
N3—C2—C3—C4147.3 (3)C6—C7—C8—F5−177.2 (3)
S—C2—C3—C4−36.4 (4)F4—C7—C8—C3−179.6 (2)
C8—C3—C4—F1−179.2 (2)C6—C7—C8—C31.1 (4)
C2—C3—C4—F1−0.8 (4)C4—C3—C8—F5177.6 (2)
C8—C3—C4—C50.0 (4)C2—C3—C8—F5−0.8 (4)
C2—C3—C4—C5178.4 (3)C4—C3—C8—C7−0.6 (4)
F1—C4—C5—F2−0.1 (4)C2—C3—C8—C7−179.1 (3)
C3—C4—C5—F2−179.3 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···N2i0.862.183.001 (4)160
N1—H1B···N3ii0.862.193.013 (3)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯N2i0.862.183.001 (4)160
N1—H1B⋯N3ii0.862.193.013 (3)161

Symmetry codes: (i) ; (ii) .

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