Literature DB >> 21588938

1-(4-Meth-oxy-benzyl-idene)-4-methyl-thiosemicarbazide.

Yu-Feng Li1.   

Abstract

The title compound, C(10)H(13)N(3)OS, was prepared by the reaction of 4-meth-oxy-benzaldehyde and 4-methyl-thio-semicarbazide. The dihedral angle between the benzene ring and the thio-urea unit is 8.64 (7)° and an intra-molecular N-H⋯N hydrogen bond generates an S(5) ring. In the crystal, inversion dimers linked by pairs of N-H⋯S hydrogen bonds generate R(2) (2)(8) loops. The dimers are linked into (001) sheets by further N-H⋯S links.

Entities:  

Year:  2010        PMID: 21588938      PMCID: PMC3009075          DOI: 10.1107/S1600536810038882

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to Schiff bases, see: Casas et al. (2000 ▶). For a related structure, see: Li & Jian (2010 ▶).

Experimental

Crystal data

C10H13N3OS M = 223.29 Orthorhombic, a = 13.397 (3) Å b = 9.1271 (18) Å c = 18.799 (4) Å V = 2298.6 (8) Å3 Z = 8 Mo Kα radiation μ = 0.26 mm−1 T = 293 K 0.25 × 0.22 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer 20742 measured reflections 2627 independent reflections 1746 reflections with I > 2σ(I) R int = 0.061

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.146 S = 0.94 2627 reflections 136 parameters H-atom parameters constrained Δρmax = 0.17 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810038882/hb5659sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810038882/hb5659Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H13N3OSDx = 1.290 Mg m3
Mr = 223.29Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PbcaCell parameters from 2650 reflections
a = 13.397 (3) Åθ = 3.2–27.2°
b = 9.1271 (18) ŵ = 0.26 mm1
c = 18.799 (4) ÅT = 293 K
V = 2298.6 (8) Å3Bar, colorless
Z = 80.25 × 0.22 × 0.18 mm
F(000) = 944
Bruker SMART CCD area-detector diffractometer1746 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.061
graphiteθmax = 27.5°, θmin = 3.0°
phi and ω scansh = −17→17
20742 measured reflectionsk = −11→11
2627 independent reflectionsl = −24→24
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 0.94w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
2627 reflections(Δ/σ)max = 0.001
136 parametersΔρmax = 0.17 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.89733 (4)1.04305 (5)0.58910 (3)0.0579 (2)
C70.89674 (13)0.2105 (2)0.33447 (9)0.0442 (4)
N30.88845 (12)0.66880 (17)0.48831 (8)0.0467 (4)
C40.92228 (14)0.4806 (2)0.40190 (10)0.0456 (4)
O10.88816 (11)0.08431 (16)0.29666 (7)0.0577 (4)
N20.91161 (12)0.80887 (17)0.50939 (9)0.0509 (4)
H2A0.95580.85770.48620.061*
C80.85569 (15)0.2343 (2)0.40146 (9)0.0483 (5)
H8A0.81970.16060.42400.058*
C20.86618 (14)0.8710 (2)0.56577 (10)0.0450 (4)
N10.79800 (13)0.79216 (17)0.59919 (8)0.0567 (5)
H1A0.78480.70610.58310.068*
C90.86880 (15)0.3681 (2)0.43415 (10)0.0484 (5)
H9A0.84120.38360.47890.058*
C30.93581 (15)0.6236 (2)0.43363 (10)0.0505 (5)
H3B0.98190.68660.41290.061*
C50.96339 (16)0.4532 (2)0.33528 (10)0.0550 (5)
H5A1.00060.52590.31300.066*
C100.83329 (19)−0.0329 (2)0.32630 (13)0.0661 (6)
H10A0.8337−0.11430.29400.099*
H10B0.7657−0.00230.33450.099*
H10C0.8631−0.06190.37060.099*
C60.95017 (17)0.3214 (2)0.30188 (10)0.0584 (5)
H6A0.97730.30630.25690.070*
C10.7442 (2)0.8428 (3)0.66153 (12)0.0832 (8)
H1B0.69850.76810.67690.125*
H1C0.70770.93010.64990.125*
H1D0.79070.86360.69900.125*
U11U22U33U12U13U23
S10.0564 (4)0.0466 (3)0.0707 (4)−0.0056 (2)0.0113 (2)−0.0107 (2)
C70.0415 (9)0.0505 (10)0.0405 (9)−0.0008 (7)0.0004 (7)−0.0047 (8)
N30.0450 (9)0.0478 (9)0.0473 (8)−0.0012 (7)0.0014 (7)−0.0062 (7)
C40.0398 (10)0.0524 (10)0.0446 (10)−0.0010 (8)0.0011 (8)−0.0025 (8)
O10.0616 (9)0.0578 (8)0.0537 (8)−0.0079 (6)0.0076 (6)−0.0105 (7)
N20.0492 (10)0.0480 (9)0.0557 (9)−0.0070 (7)0.0083 (7)−0.0079 (7)
C80.0510 (11)0.0498 (10)0.0441 (10)−0.0016 (9)0.0055 (8)0.0060 (8)
C20.0393 (9)0.0470 (10)0.0488 (10)0.0024 (8)−0.0009 (8)−0.0009 (8)
N10.0623 (11)0.0511 (9)0.0568 (10)−0.0110 (8)0.0156 (8)−0.0102 (8)
C90.0512 (11)0.0553 (11)0.0386 (9)0.0006 (9)0.0067 (8)0.0011 (8)
C30.0456 (11)0.0534 (11)0.0524 (11)−0.0051 (9)0.0023 (9)−0.0020 (9)
C50.0572 (12)0.0587 (12)0.0492 (10)−0.0129 (9)0.0156 (9)−0.0027 (9)
C100.0698 (16)0.0533 (12)0.0751 (14)−0.0098 (10)0.0038 (12)−0.0050 (10)
C60.0602 (13)0.0689 (13)0.0462 (10)−0.0105 (10)0.0168 (9)−0.0102 (9)
C10.099 (2)0.0764 (14)0.0739 (14)−0.0251 (14)0.0394 (15)−0.0209 (13)
S1—C21.683 (2)C2—N11.322 (2)
C7—O11.358 (2)N1—C11.451 (3)
C7—C61.383 (3)N1—H1A0.8600
C7—C81.391 (3)C9—H9A0.9300
N3—C31.277 (2)C3—H3B0.9300
N3—N21.374 (2)C5—C61.368 (3)
C4—C51.391 (3)C5—H5A0.9300
C4—C91.391 (3)C10—H10A0.9600
C4—C31.446 (3)C10—H10B0.9600
O1—C101.413 (2)C10—H10C0.9600
N2—C21.347 (2)C6—H6A0.9300
N2—H2A0.8600C1—H1B0.9600
C8—C91.378 (3)C1—H1C0.9600
C8—H8A0.9300C1—H1D0.9600
O1—C7—C6115.63 (16)C4—C9—H9A119.2
O1—C7—C8124.96 (17)N3—C3—C4124.16 (18)
C6—C7—C8119.40 (17)N3—C3—H3B117.9
C3—N3—N2114.88 (16)C4—C3—H3B117.9
C5—C4—C9117.63 (17)C6—C5—C4121.34 (17)
C5—C4—C3118.95 (17)C6—C5—H5A119.3
C9—C4—C3123.42 (17)C4—C5—H5A119.3
C7—O1—C10118.68 (15)O1—C10—H10A109.5
C2—N2—N3121.08 (16)O1—C10—H10B109.5
C2—N2—H2A119.5H10A—C10—H10B109.5
N3—N2—H2A119.5O1—C10—H10C109.5
C9—C8—C7119.47 (18)H10A—C10—H10C109.5
C9—C8—H8A120.3H10B—C10—H10C109.5
C7—C8—H8A120.3C5—C6—C7120.48 (17)
N1—C2—N2117.22 (17)C5—C6—H6A119.8
N1—C2—S1123.74 (15)C7—C6—H6A119.8
N2—C2—S1119.04 (15)N1—C1—H1B109.5
C2—N1—C1123.65 (17)N1—C1—H1C109.5
C2—N1—H1A118.2H1B—C1—H1C109.5
C1—N1—H1A118.2N1—C1—H1D109.5
C8—C9—C4121.67 (17)H1B—C1—H1D109.5
C8—C9—H9A119.2H1C—C1—H1D109.5
D—H···AD—HH···AD···AD—H···A
N1—H1A···N30.862.282.661 (2)107
N1—H1A···S1i0.862.863.4718 (18)130
N2—H2A···S1ii0.862.593.4359 (17)169
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯N30.862.282.661 (2)107
N1—H1A⋯S1i0.862.863.4718 (18)130
N2—H2A⋯S1ii0.862.593.4359 (17)169

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  4-Ethyl-1-(4-methyl-benzyl-idene)thio-semicarbazide.

Authors:  Yu-Feng Li; Fang-Fang Jian
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-22
  2 in total

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