Literature DB >> 21588902

Tetra-μ(3)-methano-lato-tetra-kis-[(2-formyl-6-meth-oxy-phenolato)methano-lnickel(II)].

Kouassi Ayikoe1, Ray J Butcher, Yilma Gultneh.   

Abstract

The molecule of the title compound, [Ni(4)(CH(3)O)(4)(C(8)H(7)O(3))(4)(CH(3)OH)(4)], has S(4) symmetry. Each of the four Ni(II) atoms occupies every other corner of a cube, with the alternate corners occupied by μ(3)-methano-late bridging groups linking to three Ni(II) atoms. Each Ni(II) atom is in an O(6) octa-hedral coordination environment formed by three O atoms from three μ(3)-methano-late groups, one from methanol, and two others from a bidentate 2-formyl-6-meth-oxy-phenolate ligand. The Ni-O bond distances range from 2.0020 (14) to 2.0938 (14) Å, the cis bond angles range from 81.74 (6) to 97.63°, and the trans bond angles range from 168.76 (5) to 175.22 (6)°. There are bifurcated hydrogen-bonding inter-actions between the coordinated methanol OH groups and both the phenolic and meth-oxy O atoms of an adjoining 2-formyl-6-meth-oxy-phenolate moiety. In addition, there are weak inter-molecular C-H⋯O inter-actions involving the meth-oxy O atoms.

Entities:  

Year:  2010        PMID: 21588902      PMCID: PMC3009121          DOI: 10.1107/S1600536810043497

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For literature related to Ni4 cubane-type clusters, see; Andrew & Blake (1969 ▶); Barnes & Hatfield (1971 ▶); Bertrand et al. (1971 ▶, 1978 ▶); Brezina et al. (1998 ▶); Cromie et al. (2001 ▶); El Fallah et al. (1996 ▶); Gladfelter et al. (1981 ▶); Luo et al. (2007 ▶); Moragues-Canovas et al. (2004 ▶); Mukherjee et al. (2003 ▶); Ran et al. (2008 ▶); Yang et al. (2006 ▶).

Experimental

Crystal data

[Ni4(CH3O)4(C8H7O3)4(CH4O)4] M = 1091.69 Tetragonal, a = 22.2670 (9) Å c = 9.70106 (10) Å V = 4810.0 (3) Å3 Z = 4 Mo Kα radiation μ = 1.62 mm−1 T = 110 K 0.47 × 0.28 × 0.24 mm

Data collection

Oxford Xcalibur diffractometer with a Ruby (Gemini Mo) detector Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007 ▶) T min = 0.463, T max = 1.000 12226 measured reflections 2962 independent reflections 2131 reflections with I > 2σ(I) R int = 0.035

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.081 S = 0.99 2962 reflections 149 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810043497/bt5390sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810043497/bt5390Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni4(CH3O)4(C8H7O3)4(CH4O)4]Dx = 1.508 Mg m3
Mr = 1091.69Mo Kα radiation, λ = 0.71073 Å
Tetragonal, I41/aCell parameters from 4573 reflections
Hall symbol: -I 4adθ = 5.0–29.3°
a = 22.2670 (9) ŵ = 1.62 mm1
c = 9.70106 (10) ÅT = 110 K
V = 4810.0 (3) Å3Prism, green
Z = 40.47 × 0.28 × 0.24 mm
F(000) = 2272
Oxford Xcalibur diffractometer with a Ruby (Gemini Mo) detector2962 independent reflections
Radiation source: Enhance (Mo) X-ray Source2131 reflections with I > 2σ(I)
graphiteRint = 0.035
Detector resolution: 10.5081 pixels mm-1θmax = 29.4°, θmin = 4.9°
ω scansh = −21→30
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2007)k = −30→22
Tmin = 0.463, Tmax = 1.000l = −13→12
12226 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.081H-atom parameters constrained
S = 0.99w = 1/[σ2(Fo2) + (0.0454P)2] where P = (Fo2 + 2Fc2)/3
2962 reflections(Δ/σ)max = 0.001
149 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni0.478914 (11)0.183990 (11)0.26340 (2)0.02258 (10)
O10.39721 (6)0.14647 (6)0.26250 (13)0.0269 (3)
O20.48379 (6)0.17818 (7)0.05257 (15)0.0344 (4)
O30.28657 (6)0.11763 (6)0.31043 (15)0.0336 (3)
O1S0.48109 (6)0.19293 (6)0.47507 (13)0.0232 (3)
O2S0.52889 (7)0.10453 (6)0.27601 (15)0.0351 (4)
H2S0.55240.10350.34360.042*
C10.36431 (9)0.13635 (8)0.1537 (2)0.0264 (4)
C20.38418 (10)0.14135 (10)0.0123 (2)0.0326 (5)
C30.34410 (11)0.12800 (11)−0.0989 (2)0.0439 (6)
H3A0.35800.1314−0.19110.053*
C40.28728 (11)0.11077 (11)−0.0753 (2)0.0471 (6)
H4A0.26140.1016−0.15020.057*
C50.26610 (10)0.10643 (10)0.0628 (3)0.0390 (6)
H5A0.22580.09440.07950.047*
C60.30315 (9)0.11932 (9)0.1725 (2)0.0294 (5)
C70.44257 (10)0.16174 (11)−0.0244 (2)0.0386 (6)
H7A0.45100.1629−0.12030.046*
C80.22877 (10)0.09432 (13)0.3404 (3)0.0530 (7)
H8A0.19840.11700.28890.080*
H8B0.22090.09800.43940.080*
H8C0.22710.05190.31360.080*
C1S0.46424 (10)0.14354 (9)0.5602 (2)0.0316 (5)
H1SA0.47990.14970.65350.047*
H1SB0.48090.10640.52200.047*
H1SC0.42040.14060.56350.047*
C2S0.51222 (14)0.04601 (11)0.2403 (3)0.0646 (9)
H2SA0.50600.02230.32420.097*
H2SB0.54410.02760.18480.097*
H2SC0.47490.04710.18690.097*
U11U22U33U12U13U23
Ni0.02257 (15)0.02712 (16)0.01804 (14)−0.00098 (11)0.00057 (10)−0.00374 (10)
O10.0258 (7)0.0310 (8)0.0241 (7)−0.0014 (6)−0.0011 (6)−0.0027 (6)
O20.0285 (8)0.0531 (10)0.0218 (7)−0.0090 (7)0.0017 (6)−0.0082 (7)
O30.0251 (7)0.0362 (8)0.0394 (8)−0.0014 (6)0.0064 (7)0.0024 (7)
O1S0.0285 (7)0.0219 (7)0.0193 (7)−0.0004 (6)0.0021 (5)0.0019 (5)
O2S0.0365 (8)0.0299 (8)0.0388 (9)0.0023 (7)−0.0096 (7)−0.0111 (7)
C10.0269 (10)0.0214 (10)0.0309 (11)−0.0003 (8)−0.0010 (9)−0.0038 (8)
C20.0297 (11)0.0402 (12)0.0281 (11)−0.0042 (10)0.0004 (9)−0.0072 (9)
C30.0423 (14)0.0598 (16)0.0296 (12)−0.0085 (12)−0.0021 (10)−0.0117 (11)
C40.0391 (14)0.0616 (17)0.0407 (14)−0.0098 (12)−0.0123 (11)−0.0104 (12)
C50.0239 (11)0.0391 (13)0.0541 (15)−0.0040 (9)−0.0052 (10)−0.0025 (12)
C60.0278 (11)0.0254 (10)0.0349 (12)0.0017 (9)0.0020 (9)−0.0007 (9)
C70.0370 (13)0.0560 (15)0.0228 (11)−0.0058 (12)0.0034 (9)−0.0085 (10)
C80.0245 (12)0.0724 (18)0.0621 (17)−0.0014 (12)0.0080 (12)0.0126 (14)
C1S0.0412 (12)0.0259 (11)0.0276 (11)−0.0004 (10)0.0049 (10)0.0053 (9)
C2S0.0657 (19)0.0344 (15)0.094 (2)−0.0018 (13)−0.0241 (16)−0.0189 (15)
Ni—O12.0020 (14)C2—C31.431 (3)
Ni—O1Si2.0350 (13)C3—C41.342 (3)
Ni—O22.0522 (15)C3—H3A0.9500
Ni—O1Sii2.0568 (13)C4—C51.424 (3)
Ni—O1S2.0636 (13)C4—H4A0.9500
Ni—O2S2.0938 (14)C5—C61.377 (3)
O1—C11.305 (2)C5—H5A0.9500
O2—C71.239 (3)C7—H7A0.9500
O3—C61.389 (2)C8—H8A0.9800
O3—C81.418 (3)C8—H8B0.9800
O1S—C1S1.425 (2)C8—H8C0.9800
O1S—Niii2.0350 (13)C1S—H1SA0.9800
O1S—Nii2.0568 (13)C1S—H1SB0.9800
O2S—C2S1.398 (3)C1S—H1SC0.9800
O2S—H2S0.8400C2S—H2SA0.9800
C1—C61.425 (3)C2S—H2SB0.9800
C1—C21.445 (3)C2S—H2SC0.9800
C2—C71.423 (3)
O1—Ni—O1Si172.97 (5)C4—C3—C2121.3 (2)
O1—Ni—O291.00 (5)C4—C3—H3A119.4
O1Si—Ni—O292.41 (5)C2—C3—H3A119.4
O1—Ni—O1Sii91.71 (5)C3—C4—C5119.5 (2)
O1Si—Ni—O1Sii81.74 (6)C3—C4—H4A120.3
O2—Ni—O1Sii97.63 (6)C5—C4—H4A120.3
O1—Ni—O1S93.78 (5)C6—C5—C4120.98 (19)
O1Si—Ni—O1S82.85 (5)C6—C5—H5A119.5
O2—Ni—O1S175.22 (6)C4—C5—H5A119.5
O1Sii—Ni—O1S82.32 (5)C5—C6—O3125.44 (18)
O1—Ni—O2S97.51 (6)C5—C6—C1121.94 (19)
O1Si—Ni—O2S88.72 (5)O3—C6—C1112.62 (17)
O2—Ni—O2S88.67 (6)O2—C7—C2128.4 (2)
O1Sii—Ni—O2S168.76 (5)O2—C7—H7A115.8
O1S—Ni—O2S90.63 (5)C2—C7—H7A115.8
C1—O1—Ni125.87 (12)O3—C8—H8A109.5
C7—O2—Ni125.47 (14)O3—C8—H8B109.5
C6—O3—C8116.67 (18)H8A—C8—H8B109.5
C1S—O1S—Niii119.50 (11)O3—C8—H8C109.5
C1S—O1S—Nii120.73 (12)H8A—C8—H8C109.5
Niii—O1S—Nii97.91 (6)H8B—C8—H8C109.5
C1S—O1S—Ni119.72 (12)O1S—C1S—H1SA109.5
Niii—O1S—Ni97.19 (5)O1S—C1S—H1SB109.5
Nii—O1S—Ni96.50 (5)H1SA—C1S—H1SB109.5
C2S—O2S—Ni129.19 (15)O1S—C1S—H1SC109.5
C2S—O2S—H2S109.5H1SA—C1S—H1SC109.5
Ni—O2S—H2S113.6H1SB—C1S—H1SC109.5
O1—C1—C6118.61 (18)O2S—C2S—H2SA109.5
O1—C1—C2125.64 (18)O2S—C2S—H2SB109.5
C6—C1—C2115.75 (18)H2SA—C2S—H2SB109.5
C7—C2—C3116.59 (19)O2S—C2S—H2SC109.5
C7—C2—C1122.81 (19)H2SA—C2S—H2SC109.5
C3—C2—C1120.55 (19)H2SB—C2S—H2SC109.5
O1Si—Ni—O1—C1109.0 (4)O1Si—Ni—O2S—C2S−161.5 (2)
O2—Ni—O1—C1−10.03 (15)O2—Ni—O2S—C2S−69.1 (2)
O1Sii—Ni—O1—C187.64 (15)O1Sii—Ni—O2S—C2S166.6 (3)
O1S—Ni—O1—C1170.05 (15)O1S—Ni—O2S—C2S115.7 (2)
O2S—Ni—O1—C1−98.82 (15)Ni—O1—C1—C6−168.91 (13)
O1—Ni—O2—C76.22 (19)Ni—O1—C1—C210.5 (3)
O1Si—Ni—O2—C7−167.63 (19)O1—C1—C2—C7−3.7 (3)
O1Sii—Ni—O2—C7−85.64 (19)C6—C1—C2—C7175.7 (2)
O1S—Ni—O2—C7−174.7 (6)O1—C1—C2—C3178.9 (2)
O2S—Ni—O2—C7103.71 (19)C6—C1—C2—C3−1.7 (3)
O1—Ni—O1S—C1S46.98 (14)C7—C2—C3—C4−177.3 (2)
O1Si—Ni—O1S—C1S−139.22 (15)C1—C2—C3—C40.2 (4)
O2—Ni—O1S—C1S−132.1 (7)C2—C3—C4—C50.8 (4)
O1Sii—Ni—O1S—C1S138.20 (15)C3—C4—C5—C6−0.3 (3)
O2S—Ni—O1S—C1S−50.59 (14)C4—C5—C6—O3178.63 (19)
O1—Ni—O1S—Niii−83.07 (6)C4—C5—C6—C1−1.3 (3)
O1Si—Ni—O1S—Niii90.730 (9)C8—O3—C6—C57.4 (3)
O2—Ni—O1S—Niii97.9 (7)C8—O3—C6—C1−172.74 (18)
O1Sii—Ni—O1S—Niii8.15 (6)O1—C1—C6—C5−178.32 (19)
O2S—Ni—O1S—Niii179.37 (6)C2—C1—C6—C52.2 (3)
O1—Ni—O1S—Nii178.07 (5)O1—C1—C6—O31.8 (2)
O1Si—Ni—O1S—Nii−8.13 (6)C2—C1—C6—O3−177.69 (17)
O2—Ni—O1S—Nii−1.0 (7)Ni—O2—C7—C2−2.4 (4)
O1Sii—Ni—O1S—Nii−90.708 (8)C3—C2—C7—O2176.9 (2)
O2S—Ni—O1S—Nii80.51 (6)C1—C2—C7—O2−0.6 (4)
O1—Ni—O2S—C2S21.8 (2)
D—H···AD—HH···AD···AD—H···A
O2S—H2S···O1i0.842.052.8062 (19)150
O2S—H2S···O3i0.842.503.181 (2)139
C5—H5A···O3iii0.952.453.360 (3)159
C1S—H1SC···O2Sii0.982.473.106 (3)122
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2S—H2S⋯O1i0.842.052.8062 (19)150
O2S—H2S⋯O3i0.842.503.181 (2)139
C5—H5A⋯O3ii0.952.453.360 (3)159
C1S—H1SC⋯O2Siii0.982.473.106 (3)122

Symmetry codes: (i) ; (ii) ; (iii) .

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