Literature DB >> 21588885

(2-Carb-oxy-acetato-κO,O)(rac-5,5,7,12,12,14-hexa-methyl-1,4,8,11-tetra-aza-cyclo-tetra-decane-κN,N',N'',N''')nickel(II) perchlorate acetonitrile solvate.

Guang-Chuan Ou, Seik Weng Ng.   

Abstract

In the crystal structure of the title salt, [Ni(C(3)H(3)O(4))(C(16)H(36)N(4))]ClO(4)·CH(3)CN, the macrocycle folds around the Ni(II) atom, which is also chelated by the carboxyl-ate monoanion. The geometry is a distorted NiN(4)O(2) octa-hedron. The formula units are connected by N-H⋯O hydrogen bonds into centrosymmetric dimers. Further N-H⋯O and O-H⋯O hydrogen bonds link the complex mol-ecules and the perchlorate ions.

Entities:  

Year:  2010        PMID: 21588885      PMCID: PMC3009135          DOI: 10.1107/S1600536810042637

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For three related structures, see: Jiang et al. (2005 ▶); Ou, Zhang & Yuan (2009 ▶); Ou, Zhou & Ng (2009 ▶).

Experimental

Crystal data

[Ni(C3H3O4)(C16H36N4)]ClO4·C2H3N M = 586.76 Triclinic, a = 9.5236 (4) Å b = 10.1766 (4) Å c = 15.3372 (6) Å α = 92.899 (1)° β = 107.388 (1)° γ = 106.516 (1)° V = 1344.99 (9) Å3 Z = 2 Mo Kα radiation μ = 0.87 mm−1 T = 173 K 0.45 × 0.40 × 0.20 mm

Data collection

Bruker SMART APEX diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.695, T max = 0.845 11181 measured reflections 5701 independent reflections 4946 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.090 S = 1.03 5701 reflections 330 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.55 e Å−3 Δρmin = −0.54 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810042637/bt5383sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810042637/bt5383Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C3H3O4)(C16H36N4)]ClO4·C2H3NZ = 2
Mr = 586.76F(000) = 624
Triclinic, P1Dx = 1.449 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.5236 (4) ÅCell parameters from 7463 reflections
b = 10.1766 (4) Åθ = 2.3–27.0°
c = 15.3372 (6) ŵ = 0.87 mm1
α = 92.899 (1)°T = 173 K
β = 107.388 (1)°Block, blue
γ = 106.516 (1)°0.45 × 0.40 × 0.20 mm
V = 1344.99 (9) Å3
Bruker SMART APEX diffractometer5701 independent reflections
Radiation source: fine-focus sealed tube4946 reflections with I > 2σ(I)
graphiteRint = 0.019
φ and ω scansθmax = 27.0°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −12→12
Tmin = 0.695, Tmax = 0.845k = −12→12
11181 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0459P)2 + 0.9446P] where P = (Fo2 + 2Fc2)/3
5701 reflections(Δ/σ)max = 0.001
330 parametersΔρmax = 0.55 e Å3
1 restraintΔρmin = −0.54 e Å3
xyzUiso*/Ueq
Ni10.44427 (3)0.26403 (2)0.226567 (15)0.01746 (8)
Cl10.11013 (6)0.48419 (5)0.33697 (4)0.02939 (12)
O10.53455 (15)0.20193 (14)0.11561 (9)0.0226 (3)
O20.63737 (15)0.19233 (14)0.26257 (9)0.0232 (3)
O30.60045 (17)−0.08012 (15)0.05987 (10)0.0296 (3)
H3O0.565 (3)−0.119 (3)0.0053 (9)0.048 (8)*
O40.75796 (18)0.07704 (17)0.00664 (10)0.0366 (4)
O50.0676 (2)0.4372 (3)0.24039 (14)0.0642 (6)
O6−0.0232 (2)0.4920 (2)0.35800 (12)0.0452 (4)
O70.1767 (2)0.3921 (2)0.39064 (17)0.0605 (6)
O90.2239 (2)0.6171 (2)0.35917 (14)0.0593 (5)
N10.26807 (18)0.07075 (16)0.17735 (11)0.0211 (3)
H10.28500.03490.12950.025*
N20.27765 (18)0.34713 (17)0.15032 (11)0.0225 (3)
H20.23730.37730.18880.027*
N30.60664 (18)0.46469 (16)0.27909 (11)0.0211 (3)
H30.69840.45270.29540.025*
N40.41760 (19)0.26668 (16)0.35641 (11)0.0212 (3)
H40.33440.29030.35330.025*
N50.9236 (3)0.0264 (3)0.37545 (18)0.0560 (6)
C10.1245 (2)0.1067 (2)0.13879 (15)0.0292 (4)
H1A0.08760.13120.18940.035*
H1B0.04270.02600.09670.035*
C20.1553 (2)0.2276 (2)0.08669 (14)0.0282 (4)
H2A0.18900.20230.03490.034*
H2B0.05930.25230.06090.034*
C30.3327 (2)0.4644 (2)0.10165 (13)0.0255 (4)
H3A0.38130.43230.05880.031*
C40.1996 (3)0.5125 (3)0.04463 (16)0.0371 (5)
H4A0.12100.43420.00020.056*
H4B0.23960.58610.01130.056*
H4C0.15320.54800.08580.056*
C50.4547 (2)0.5866 (2)0.17060 (14)0.0276 (4)
H5A0.46770.66840.13800.033*
H5B0.41180.60600.21940.033*
C60.6159 (2)0.5764 (2)0.21848 (13)0.0249 (4)
C70.6890 (2)0.5397 (2)0.14827 (14)0.0291 (4)
H7A0.62480.44920.11170.044*
H7B0.79310.53620.18090.044*
H7C0.69590.61040.10720.044*
C80.7192 (3)0.7183 (2)0.27434 (16)0.0346 (5)
H8A0.82350.71390.30570.052*
H8B0.67520.74350.32040.052*
H8C0.72510.78800.23270.052*
C90.5823 (2)0.5038 (2)0.36648 (13)0.0269 (4)
H9A0.49170.53810.35310.032*
H9B0.67450.57910.40630.032*
C100.5551 (2)0.3792 (2)0.41571 (13)0.0268 (4)
H10A0.64720.34700.43080.032*
H10B0.53890.40490.47420.032*
C110.4025 (2)0.1328 (2)0.39390 (13)0.0256 (4)
H110.49510.10430.39490.031*
C120.3970 (3)0.1463 (2)0.49289 (15)0.0367 (5)
H12A0.48980.21910.53250.055*
H12B0.39330.05800.51640.055*
H12C0.30440.17030.49300.055*
C130.2577 (2)0.0191 (2)0.33284 (14)0.0287 (4)
H13A0.2388−0.05890.36840.034*
H13B0.16920.05570.32270.034*
C140.2539 (2)−0.0404 (2)0.23828 (14)0.0260 (4)
C150.3865 (3)−0.0994 (2)0.24651 (15)0.0309 (5)
H15A0.4856−0.02540.27390.046*
H15B0.3793−0.13850.18500.046*
H15C0.3801−0.17220.28590.046*
C160.1011 (3)−0.1599 (2)0.19501 (17)0.0394 (5)
H16A0.0967−0.19940.13430.059*
H16B0.0134−0.12460.18800.059*
H16C0.0961−0.23180.23520.059*
C170.6356 (2)0.17427 (19)0.18083 (13)0.0213 (4)
C180.7602 (2)0.1236 (2)0.16206 (14)0.0287 (4)
H18A0.85140.20450.16790.034*
H18B0.79300.06600.20940.034*
C190.7075 (2)0.0401 (2)0.06769 (14)0.0249 (4)
C200.9213 (3)0.1114 (3)0.42492 (17)0.0367 (5)
C210.9193 (3)0.2199 (3)0.48808 (19)0.0461 (6)
H21A0.99080.22220.54970.069*
H21B0.81430.20200.49090.069*
H21C0.95170.30920.46660.069*
U11U22U33U12U13U23
Ni10.01746 (13)0.02064 (13)0.01497 (12)0.00797 (9)0.00478 (9)0.00037 (8)
Cl10.0266 (2)0.0302 (3)0.0345 (3)0.0106 (2)0.0132 (2)0.0033 (2)
O10.0187 (6)0.0258 (7)0.0217 (7)0.0075 (5)0.0045 (5)−0.0003 (5)
O20.0232 (7)0.0264 (7)0.0210 (7)0.0109 (6)0.0063 (5)−0.0014 (5)
O30.0314 (8)0.0322 (8)0.0216 (7)0.0082 (6)0.0062 (6)−0.0020 (6)
O40.0302 (8)0.0473 (10)0.0276 (8)0.0037 (7)0.0127 (7)−0.0075 (7)
O50.0548 (12)0.0906 (16)0.0429 (11)0.0162 (11)0.0208 (9)−0.0196 (11)
O60.0388 (9)0.0625 (12)0.0471 (10)0.0282 (9)0.0211 (8)0.0056 (9)
O70.0582 (12)0.0579 (12)0.0934 (17)0.0388 (11)0.0410 (12)0.0382 (12)
O90.0513 (12)0.0460 (11)0.0582 (13)−0.0053 (9)0.0046 (10)0.0128 (9)
N10.0205 (8)0.0244 (8)0.0190 (8)0.0070 (6)0.0080 (6)0.0001 (6)
N20.0221 (8)0.0279 (8)0.0188 (8)0.0119 (7)0.0050 (6)0.0020 (6)
N30.0211 (8)0.0238 (8)0.0187 (8)0.0086 (6)0.0058 (6)0.0014 (6)
N40.0241 (8)0.0230 (8)0.0185 (8)0.0105 (6)0.0072 (6)0.0023 (6)
N50.0522 (14)0.0499 (14)0.0606 (16)0.0148 (11)0.0148 (12)−0.0084 (12)
C10.0182 (9)0.0338 (11)0.0307 (11)0.0060 (8)0.0035 (8)0.0011 (8)
C20.0202 (9)0.0354 (11)0.0242 (10)0.0103 (8)−0.0006 (8)0.0013 (8)
C30.0288 (10)0.0318 (11)0.0214 (9)0.0168 (9)0.0089 (8)0.0067 (8)
C40.0373 (12)0.0470 (14)0.0342 (12)0.0252 (11)0.0091 (10)0.0163 (10)
C50.0356 (11)0.0248 (10)0.0271 (10)0.0153 (9)0.0109 (9)0.0069 (8)
C60.0284 (10)0.0222 (9)0.0225 (10)0.0062 (8)0.0077 (8)0.0034 (7)
C70.0290 (11)0.0325 (11)0.0272 (10)0.0082 (9)0.0126 (9)0.0056 (8)
C80.0382 (12)0.0247 (11)0.0345 (12)0.0025 (9)0.0100 (10)0.0014 (9)
C90.0343 (11)0.0245 (10)0.0195 (9)0.0086 (8)0.0067 (8)−0.0026 (7)
C100.0331 (11)0.0273 (10)0.0168 (9)0.0088 (8)0.0050 (8)−0.0014 (7)
C110.0316 (11)0.0273 (10)0.0200 (9)0.0117 (8)0.0089 (8)0.0048 (8)
C120.0539 (15)0.0362 (12)0.0211 (10)0.0121 (11)0.0156 (10)0.0071 (9)
C130.0329 (11)0.0284 (10)0.0270 (10)0.0061 (9)0.0163 (9)0.0054 (8)
C140.0302 (11)0.0230 (10)0.0253 (10)0.0064 (8)0.0117 (8)0.0030 (8)
C150.0423 (12)0.0248 (10)0.0320 (11)0.0157 (9)0.0163 (10)0.0050 (8)
C160.0404 (13)0.0302 (12)0.0393 (13)−0.0012 (10)0.0132 (10)0.0019 (9)
C170.0181 (9)0.0201 (9)0.0240 (9)0.0043 (7)0.0071 (7)−0.0030 (7)
C180.0190 (9)0.0415 (12)0.0236 (10)0.0121 (9)0.0037 (8)−0.0086 (8)
C190.0179 (9)0.0330 (11)0.0243 (10)0.0129 (8)0.0044 (8)−0.0040 (8)
C200.0310 (12)0.0379 (13)0.0383 (13)0.0099 (10)0.0080 (10)0.0062 (10)
C210.0508 (15)0.0462 (15)0.0453 (15)0.0162 (12)0.0213 (12)0.0014 (11)
Ni1—N42.0813 (16)C5—H5A0.9900
Ni1—N22.0868 (16)C5—H5B0.9900
Ni1—O22.1014 (13)C6—C71.529 (3)
Ni1—N12.1144 (16)C6—C81.533 (3)
Ni1—N32.1223 (16)C7—H7A0.9800
Ni1—O12.2603 (13)C7—H7B0.9800
Ni1—C172.5082 (18)C7—H7C0.9800
Cl1—O61.4222 (16)C8—H8A0.9800
Cl1—O91.4213 (19)C8—H8B0.9800
Cl1—O51.4306 (19)C8—H8C0.9800
Cl1—O71.4359 (19)C9—C101.507 (3)
O1—C171.270 (2)C9—H9A0.9900
O2—C171.252 (2)C9—H9B0.9900
O3—C191.324 (3)C10—H10A0.9900
O3—H3o0.83 (1)C10—H10B0.9900
O4—C191.204 (3)C11—C131.526 (3)
N1—C11.475 (2)C11—C121.535 (3)
N1—C141.505 (2)C11—H111.0000
N1—H10.8800C12—H12A0.9800
N2—C21.478 (3)C12—H12B0.9800
N2—C31.491 (3)C12—H12C0.9800
N2—H20.8800C13—C141.529 (3)
N3—C91.481 (2)C13—H13A0.9900
N3—C61.504 (2)C13—H13B0.9900
N3—H30.8800C14—C151.521 (3)
N4—C101.478 (2)C14—C161.540 (3)
N4—C111.491 (2)C15—H15A0.9800
N4—H40.8800C15—H15B0.9800
N5—C201.131 (3)C15—H15C0.9800
C1—C21.508 (3)C16—H16A0.9800
C1—H1A0.9900C16—H16B0.9800
C1—H1B0.9900C16—H16C0.9800
C2—H2A0.9900C17—C181.515 (3)
C2—H2B0.9900C18—C191.506 (3)
C3—C41.531 (3)C18—H18A0.9900
C3—C51.525 (3)C18—H18B0.9900
C3—H3A1.0000C20—C211.439 (3)
C4—H4A0.9800C21—H21A0.9800
C4—H4B0.9800C21—H21B0.9800
C4—H4C0.9800C21—H21C0.9800
C5—C61.527 (3)
N4—Ni1—N2104.09 (6)C5—C6—C7111.33 (16)
N4—Ni1—O295.69 (6)N3—C6—C8111.54 (16)
N2—Ni1—O2159.77 (6)C5—C6—C8108.18 (17)
N4—Ni1—N191.55 (6)C7—C6—C8108.01 (17)
N2—Ni1—N185.19 (6)C6—C7—H7A109.5
O2—Ni1—N198.65 (6)C6—C7—H7B109.5
N4—Ni1—N385.63 (6)H7A—C7—H7B109.5
N2—Ni1—N391.43 (6)C6—C7—H7C109.5
O2—Ni1—N385.80 (6)H7A—C7—H7C109.5
N1—Ni1—N3174.96 (6)H7B—C7—H7C109.5
N4—Ni1—O1154.65 (6)C6—C8—H8A109.5
N2—Ni1—O1100.65 (6)C6—C8—H8B109.5
O2—Ni1—O160.22 (5)H8A—C8—H8B109.5
N1—Ni1—O185.06 (5)C6—C8—H8C109.5
N3—Ni1—O199.27 (5)H8A—C8—H8C109.5
N4—Ni1—C17125.20 (6)H8B—C8—H8C109.5
N2—Ni1—C17130.70 (6)N3—C9—C10109.34 (16)
O2—Ni1—C1729.89 (6)N3—C9—H9A109.8
N1—Ni1—C1792.09 (6)C10—C9—H9A109.8
N3—Ni1—C1792.95 (6)N3—C9—H9B109.8
O1—Ni1—C1730.33 (6)C10—C9—H9B109.8
O6—Cl1—O9110.07 (13)H9A—C9—H9B108.3
O6—Cl1—O5109.36 (12)N4—C10—C9109.92 (16)
O9—Cl1—O5108.85 (13)N4—C10—H10A109.7
O6—Cl1—O7110.15 (12)C9—C10—H10A109.7
O9—Cl1—O7107.90 (13)N4—C10—H10B109.7
O5—Cl1—O7110.50 (14)C9—C10—H10B109.7
C17—O1—Ni185.69 (11)H10A—C10—H10B108.2
C17—O2—Ni193.34 (11)N4—C11—C13111.13 (16)
C19—O3—H3O110 (2)N4—C11—C12111.90 (16)
C1—N1—C14113.93 (15)C13—C11—C12109.05 (17)
C1—N1—Ni1104.51 (12)N4—C11—H11108.2
C14—N1—Ni1120.56 (12)C13—C11—H11108.2
C1—N1—H1105.6C12—C11—H11108.2
C14—N1—H1105.6C11—C12—H12A109.5
Ni1—N1—H1105.6C11—C12—H12B109.5
C2—N2—C3112.71 (15)H12A—C12—H12B109.5
C2—N2—Ni1104.89 (12)C11—C12—H12C109.5
C3—N2—Ni1116.63 (12)H12A—C12—H12C109.5
C2—N2—H2107.4H12B—C12—H12C109.5
C3—N2—H2107.4C14—C13—C11119.18 (17)
Ni1—N2—H2107.4C14—C13—H13A107.5
C9—N3—C6114.03 (15)C11—C13—H13A107.5
C9—N3—Ni1104.30 (11)C14—C13—H13B107.5
C6—N3—Ni1120.41 (12)C11—C13—H13B107.5
C9—N3—H3105.7H13A—C13—H13B107.0
C6—N3—H3105.7N1—C14—C15107.74 (16)
Ni1—N3—H3105.7N1—C14—C13110.42 (16)
C10—N4—C11112.07 (15)C15—C14—C13111.55 (17)
C10—N4—Ni1104.22 (12)N1—C14—C16111.13 (17)
C11—N4—Ni1115.03 (11)C15—C14—C16107.64 (18)
C10—N4—H4108.4C13—C14—C16108.34 (17)
C11—N4—H4108.4C14—C15—H15A109.5
Ni1—N4—H4108.4C14—C15—H15B109.5
N1—C1—C2109.58 (16)H15A—C15—H15B109.5
N1—C1—H1A109.8C14—C15—H15C109.5
C2—C1—H1A109.8H15A—C15—H15C109.5
N1—C1—H1B109.8H15B—C15—H15C109.5
C2—C1—H1B109.8C14—C16—H16A109.5
H1A—C1—H1B108.2C14—C16—H16B109.5
N2—C2—C1109.16 (16)H16A—C16—H16B109.5
N2—C2—H2A109.8C14—C16—H16C109.5
C1—C2—H2A109.8H16A—C16—H16C109.5
N2—C2—H2B109.8H16B—C16—H16C109.5
C1—C2—H2B109.8O2—C17—O1120.74 (17)
H2A—C2—H2B108.3O2—C17—C18118.42 (17)
N2—C3—C4112.02 (17)O1—C17—C18120.80 (17)
N2—C3—C5110.60 (16)O2—C17—Ni156.76 (9)
C4—C3—C5109.25 (17)O1—C17—Ni163.98 (10)
N2—C3—H3A108.3C18—C17—Ni1174.93 (14)
C4—C3—H3A108.3C19—C18—C17113.04 (16)
C5—C3—H3A108.3C19—C18—H18A109.0
C3—C4—H4A109.5C17—C18—H18A109.0
C3—C4—H4B109.5C19—C18—H18B109.0
H4A—C4—H4B109.5C17—C18—H18B109.0
C3—C4—H4C109.5H18A—C18—H18B107.8
H4A—C4—H4C109.5O4—C19—O3123.73 (18)
H4B—C4—H4C109.5O4—C19—C18124.16 (19)
C6—C5—C3119.38 (16)O3—C19—C18112.10 (18)
C6—C5—H5A107.5N5—C20—C21179.6 (3)
C3—C5—H5A107.5C20—C21—H21A109.5
C6—C5—H5B107.5C20—C21—H21B109.5
C3—C5—H5B107.5H21A—C21—H21B109.5
H5A—C5—H5B107.0C20—C21—H21C109.5
N3—C6—C5110.32 (16)H21A—C21—H21C109.5
N3—C6—C7107.46 (16)H21B—C21—H21C109.5
D—H···AD—HH···AD···AD—H···A
O3—H3o···O1i0.83 (1)1.84 (1)2.669 (2)173 (3)
N1—H1···O4i0.882.193.038 (2)161
N2—H2···O50.882.213.052 (2)160
N3—H3···O6ii0.882.443.291 (2)163
N4—H4···O70.882.243.080 (2)161
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3o⋯O1i0.83 (1)1.84 (1)2.669 (2)173 (3)
N1—H1⋯O4i0.882.193.038 (2)161
N2—H2⋯O50.882.213.052 (2)160
N3—H3⋯O6ii0.882.443.291 (2)163
N4—H4⋯O70.882.243.080 (2)161

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (2-Carboxy-benzoato-κO,O)(5,5,7,12,12,14-hexa-methyl-1,4,8,11-tetra-azacyclo-tetra-decane-κN)nickel(II) perchlorate monohydrate.

Authors:  Guang-Chuan Ou; Min Zhang; Xian-You Yuan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06

3.  Bis(5,5,7,12,12,14-hexa-methyl-1,4,8,11-tetra-azacyclo-tetra-decane-κN)(μ-l-mal-ato-κO,O:O,O)dinickel(II) bis(perchlorate) monohydrate.

Authors:  Guang-Chuan Ou; Qiang Zhou; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-06
  3 in total
  1 in total

1.  (Cinnamato-κ(2)O,O')(5,5,7,12,12,14-hexa-methyl-1,4,8,11-tetra-aza-cyclo-tetra-decane-κ(4)N,N',N'',N''')nickel(II) perchlorate monohydrate.

Authors:  Qiang Gao; Yi-Cheng Cao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-21
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.