| Literature DB >> 21588878 |
Zhi-Dong Shao1, Yu-Qi Zhang, Shu-Li Wu, Yun-Xiao Liang.
Abstract
The structure of the title compound, catena-poly[[[di-μ-aqua-μ-fumarato-μ-(boric acid)-disodium]-di-μ-aqua] boric acid monosolvate], contains two crystallographically independent Na(+) cations, each being six-coordinated by one fumarate O atom, one boric acid O atom and four water O atoms in a distorted octa-hedral geometry. Adjacent [NaO(2)(OH(2))(4)] units share edges and are linked into chains propagating parallel to [100]. The free boric acid mol-ecules are connected to the chains through strong inter-molecular O-H⋯O hydrogen bonds. Additional O-H⋯O hydrogen bonds between the water mol-ecules, the free and coordinated boric acid mol-ecules and the fumarate anion lead to the formation of a three-dimensional supra-molecular structure. With the exception of the two water mol-ecules, all other atoms lie on mirror planes.Entities:
Year: 2010 PMID: 21588878 PMCID: PMC3009159 DOI: 10.1107/S1600536810041358
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Na2(C4H2O4)(H3BO3)(H2O)4]·H3BO3 | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2n | Cell parameters from 10305 reflections |
| θ = 3.1–27.4° | |
| µ = 0.21 mm−1 | |
| Block, colorless | |
| 0.39 × 0.26 × 0.25 mm |
| Rigaku R-AXIS RAPID diffractometer | 1806 independent reflections |
| Radiation source: fine-focus sealed tube | 1460 reflections with |
| graphite | |
| ω scans | θmax = 27.4°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 13772 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1806 reflections | (Δ/σ)max = 0.001 |
| 127 parameters | Δρmax = 0.48 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Na1 | 0.62506 (5) | 0.2500 | 0.69475 (5) | 0.0291 (2) | |
| Na2 | 0.37214 (5) | 0.2500 | 0.74696 (5) | 0.0329 (2) | |
| B1 | 0.54673 (15) | 0.2500 | 0.91475 (15) | 0.0306 (5) | |
| B2 | 0.34246 (15) | 0.2500 | 1.10354 (14) | 0.0272 (4) | |
| C1 | 0.58145 (12) | 0.2500 | 0.48138 (12) | 0.0239 (4) | |
| C2 | 0.48259 (12) | 0.2500 | 0.51652 (12) | 0.0285 (4) | |
| H2A | 0.4753 | 0.2500 | 0.5795 | 0.034* | |
| C3 | 0.40513 (13) | 0.2500 | 0.46889 (13) | 0.0315 (4) | |
| H3A | 0.4111 | 0.2500 | 0.4058 | 0.038* | |
| C4 | 0.30740 (12) | 0.2500 | 0.50783 (13) | 0.0269 (4) | |
| O1 | 0.64692 (9) | 0.2500 | 0.53758 (9) | 0.0352 (4) | |
| O2 | 0.59437 (9) | 0.2500 | 0.39758 (8) | 0.0287 (3) | |
| O3 | 0.24072 (9) | 0.2500 | 0.45118 (9) | 0.0367 (4) | |
| O4 | 0.29720 (9) | 0.2500 | 0.59059 (9) | 0.0374 (4) | |
| O5 | 0.61770 (9) | 0.2500 | 0.85300 (10) | 0.0401 (4) | |
| H5A | 0.6759 | 0.2500 | 0.8732 | 0.050* | |
| O6 | 0.45594 (10) | 0.2500 | 0.88318 (10) | 0.0481 (5) | |
| H6A | 0.4145 | 0.2500 | 0.9289 | 0.050* | |
| O7 | 0.56202 (8) | 0.2500 | 1.00406 (9) | 0.0402 (4) | |
| H7A | 0.6218 | 0.2500 | 1.0174 | 0.050* | |
| O8 | 0.32662 (9) | 0.2500 | 1.01491 (10) | 0.0423 (4) | |
| H8A | 0.2683 | 0.2500 | 0.9977 | 0.050* | |
| O9 | 0.27009 (9) | 0.2500 | 1.16470 (9) | 0.0315 (3) | |
| H9A | 0.2178 | 0.2500 | 1.1379 | 0.047* | |
| O10 | 0.43302 (9) | 0.2500 | 1.13675 (9) | 0.0366 (4) | |
| H10A | 0.4719 | 0.2500 | 1.0943 | 0.055* | |
| O11 | 0.49721 (7) | 0.01436 (15) | 0.71463 (6) | 0.0354 (3) | |
| H11B | 0.4694 | −0.0581 | 0.6800 | 0.050* | |
| H11A | 0.5038 | −0.0341 | 0.7696 | 0.050* | |
| O12 | 0.75426 (7) | 0.02208 (15) | 0.69870 (6) | 0.0358 (3) | |
| H12B | 0.7608 | −0.0362 | 0.6419 | 0.050* | |
| H12A | 0.7415 | −0.0522 | 0.7374 | 0.050* |
| Na1 | 0.0239 (4) | 0.0398 (4) | 0.0238 (4) | 0.000 | −0.0013 (3) | 0.000 |
| Na2 | 0.0238 (4) | 0.0429 (5) | 0.0321 (5) | 0.000 | −0.0002 (3) | 0.000 |
| B1 | 0.0218 (10) | 0.0481 (13) | 0.0219 (10) | 0.000 | −0.0013 (8) | 0.000 |
| B2 | 0.0218 (9) | 0.0366 (11) | 0.0231 (10) | 0.000 | −0.0009 (8) | 0.000 |
| C1 | 0.0207 (8) | 0.0298 (9) | 0.0211 (8) | 0.000 | −0.0003 (6) | 0.000 |
| C2 | 0.0206 (8) | 0.0431 (10) | 0.0218 (9) | 0.000 | 0.0024 (7) | 0.000 |
| C3 | 0.0213 (8) | 0.0503 (12) | 0.0230 (9) | 0.000 | 0.0040 (7) | 0.000 |
| C4 | 0.0175 (8) | 0.0367 (10) | 0.0266 (9) | 0.000 | 0.0022 (7) | 0.000 |
| O1 | 0.0185 (6) | 0.0632 (10) | 0.0239 (7) | 0.000 | −0.0020 (5) | 0.000 |
| O2 | 0.0210 (6) | 0.0441 (8) | 0.0210 (6) | 0.000 | −0.0005 (5) | 0.000 |
| O3 | 0.0186 (6) | 0.0645 (10) | 0.0270 (7) | 0.000 | 0.0007 (5) | 0.000 |
| O4 | 0.0231 (7) | 0.0661 (10) | 0.0231 (7) | 0.000 | 0.0019 (5) | 0.000 |
| O5 | 0.0186 (6) | 0.0795 (11) | 0.0223 (7) | 0.000 | −0.0008 (5) | 0.000 |
| O6 | 0.0194 (7) | 0.1019 (14) | 0.0229 (7) | 0.000 | −0.0010 (5) | 0.000 |
| O7 | 0.0175 (6) | 0.0822 (12) | 0.0208 (7) | 0.000 | −0.0013 (5) | 0.000 |
| O8 | 0.0172 (6) | 0.0852 (11) | 0.0243 (7) | 0.000 | −0.0002 (5) | 0.000 |
| O9 | 0.0206 (6) | 0.0504 (8) | 0.0235 (7) | 0.000 | −0.0002 (5) | 0.000 |
| O10 | 0.0206 (6) | 0.0642 (10) | 0.0248 (7) | 0.000 | −0.0012 (5) | 0.000 |
| O11 | 0.0378 (5) | 0.0379 (5) | 0.0303 (5) | −0.0042 (4) | −0.0043 (4) | −0.0039 (4) |
| O12 | 0.0384 (5) | 0.0371 (5) | 0.0318 (5) | −0.0006 (4) | 0.0005 (4) | 0.0004 (4) |
| Na1—O5 | 2.3756 (17) | C1—O1 | 1.251 (2) |
| Na1—O1 | 2.3771 (17) | C1—O2 | 1.270 (2) |
| Na1—O12i | 2.4140 (12) | C1—C2 | 1.492 (2) |
| Na1—O12 | 2.4140 (12) | C2—C3 | 1.306 (3) |
| Na1—O11 | 2.4529 (12) | C2—H2A | 0.9500 |
| Na1—O11i | 2.4529 (12) | C3—C4 | 1.498 (2) |
| Na1—Na2ii | 3.5955 (12) | C3—H3A | 0.9500 |
| Na1—Na2 | 3.6552 (12) | C4—O4 | 1.250 (2) |
| Na2—O6 | 2.3606 (16) | C4—O3 | 1.268 (2) |
| Na2—O12iii | 2.4353 (12) | O5—H5A | 0.8756 |
| Na2—O12iv | 2.4353 (12) | O6—H6A | 0.9013 |
| Na2—O11i | 2.4541 (12) | O7—H7A | 0.8673 |
| Na2—O11 | 2.4541 (12) | O8—H8A | 0.8627 |
| Na2—O4 | 2.5727 (17) | O9—H9A | 0.8400 |
| Na2—Na1iii | 3.5955 (12) | O10—H10A | 0.8400 |
| B1—O7 | 1.357 (3) | O11—H11B | 0.8224 |
| B1—O5 | 1.364 (3) | O11—H11A | 0.8951 |
| B1—O6 | 1.366 (3) | O12—Na2ii | 2.4353 (12) |
| B2—O8 | 1.348 (3) | O12—H12B | 0.9473 |
| B2—O10 | 1.372 (2) | O12—H12A | 0.7967 |
| B2—O9 | 1.373 (2) | ||
| O5—Na1—O1 | 175.05 (6) | O1—C1—O2 | 124.12 (17) |
| O5—Na1—O12i | 90.49 (4) | O1—C1—C2 | 116.94 (17) |
| O1—Na1—O12i | 85.77 (4) | O2—C1—C2 | 118.94 (16) |
| O5—Na1—O12 | 90.49 (4) | C3—C2—C1 | 126.15 (18) |
| O1—Na1—O12 | 85.77 (4) | C3—C2—H2A | 116.9 |
| O12i—Na1—O12 | 81.80 (5) | C1—C2—H2A | 116.9 |
| O5—Na1—O11 | 81.16 (4) | C2—C3—C4 | 123.90 (18) |
| O1—Na1—O11 | 102.48 (4) | C2—C3—H3A | 118.1 |
| O12i—Na1—O11 | 171.52 (5) | C4—C3—H3A | 118.1 |
| O12—Na1—O11 | 96.70 (4) | O4—C4—O3 | 125.46 (16) |
| O5—Na1—O11i | 81.16 (4) | O4—C4—C3 | 119.56 (16) |
| O1—Na1—O11i | 102.48 (4) | O3—C4—C3 | 114.98 (16) |
| O12i—Na1—O11i | 96.70 (4) | C1—O1—Na1 | 124.91 (12) |
| O12—Na1—O11i | 171.52 (5) | C4—O4—Na2 | 149.11 (12) |
| O11—Na1—O11i | 83.55 (5) | B1—O5—Na1 | 135.26 (12) |
| O6—Na2—O12iii | 93.03 (4) | B1—O5—H5A | 117.0 |
| O6—Na2—O12iv | 93.03 (4) | Na1—O5—H5A | 107.7 |
| O12iii—Na2—O12iv | 80.93 (5) | B1—O6—Na2 | 140.35 (13) |
| O6—Na2—O11i | 79.08 (4) | B1—O6—H6A | 110.2 |
| O12iii—Na2—O11i | 171.82 (5) | Na2—O6—H6A | 109.5 |
| O12iv—Na2—O11i | 97.21 (4) | B1—O7—H7A | 112.5 |
| O6—Na2—O11 | 79.08 (4) | B2—O8—H8A | 117.0 |
| O12iii—Na2—O11 | 97.21 (4) | B2—O9—H9A | 109.5 |
| O12iv—Na2—O11 | 171.82 (5) | B2—O10—H10A | 109.5 |
| O11i—Na2—O11 | 83.50 (5) | Na1—O11—Na2 | 96.30 (4) |
| O6—Na2—O4 | 174.20 (6) | Na1—O11—H11B | 133.0 |
| O12iii—Na2—O4 | 91.38 (4) | Na2—O11—H11B | 100.9 |
| O12iv—Na2—O4 | 91.38 (4) | Na1—O11—H11A | 106.6 |
| O11i—Na2—O4 | 96.64 (4) | Na2—O11—H11A | 98.2 |
| O11—Na2—O4 | 96.64 (4) | H11B—O11—H11A | 113.7 |
| O7—B1—O5 | 123.60 (18) | Na1—O12—Na2ii | 95.71 (4) |
| O7—B1—O6 | 119.43 (18) | Na1—O12—H12B | 109.3 |
| O5—B1—O6 | 116.97 (18) | Na2ii—O12—H12B | 120.7 |
| O8—B2—O10 | 120.84 (18) | Na1—O12—H12A | 105.7 |
| O8—B2—O9 | 122.36 (17) | Na2ii—O12—H12A | 109.3 |
| O10—B2—O9 | 116.80 (17) | H12B—O12—H12A | 113.7 |
| H··· | ||||
| O6—H6A···O8 | 0.90 | 1.79 | 2.690 (2) | 177 |
| O10—H10A···O7 | 0.84 | 1.86 | 2.6973 (19) | 178 |
| O5—H5A···O4ii | 0.88 | 1.80 | 2.6713 (19) | 177 |
| O7—H7A···O3ii | 0.87 | 1.74 | 2.6104 (18) | 178 |
| O12—H12B···O3v | 0.95 | 2.04 | 2.9355 (15) | 157.8 |
| O12—H12A···O9vi | 0.80 | 2.02 | 2.8063 (14) | 171.5 |
| O11—H11B···O2v | 0.82 | 1.98 | 2.8042 (14) | 175.5 |
| O11—H11A···O10vi | 0.90 | 2.24 | 3.0494 (15) | 150.5 |
| O8—H8A···O1iii | 0.86 | 1.79 | 2.6559 (19) | 180 |
| O9—H9A···O2iii | 0.84 | 1.82 | 2.6504 (19) | 168 |
| Na1—O5 | 2.3756 (17) |
| Na1—O1 | 2.3771 (17) |
| Na1—O12 | 2.4140 (12) |
| Na1—O11 | 2.4529 (12) |
| Na2—O6 | 2.3606 (16) |
| Na2—O12i | 2.4353 (12) |
| Na2—O11 | 2.4541 (12) |
| Na2—O4 | 2.5727 (17) |
| B1—O7 | 1.357 (3) |
| B1—O5 | 1.364 (3) |
| B1—O6 | 1.366 (3) |
| B2—O8 | 1.348 (3) |
| B2—O10 | 1.372 (2) |
| B2—O9 | 1.373 (2) |
| O7—B1—O5 | 123.60 (18) |
| O7—B1—O6 | 119.43 (18) |
| O5—B1—O6 | 116.97 (18) |
| O8—B2—O10 | 120.84 (18) |
| O8—B2—O9 | 122.36 (17) |
| O10—B2—O9 | 116.80 (17) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O6—H6 | 0.90 | 1.79 | 2.690 (2) | 177 |
| O10—H10 | 0.84 | 1.86 | 2.6973 (19) | 178 |
| O5—H5 | 0.88 | 1.80 | 2.6713 (19) | 177 |
| O7—H7 | 0.87 | 1.74 | 2.6104 (18) | 178 |
| O12—H12 | 0.95 | 2.04 | 2.9355 (15) | 157.8 |
| O12—H12 | 0.80 | 2.02 | 2.8063 (14) | 171.5 |
| O11—H11 | 0.82 | 1.98 | 2.8042 (14) | 175.5 |
| O11—H11 | 0.90 | 2.24 | 3.0494 (15) | 150.5 |
| O8—H8 | 0.86 | 1.79 | 2.6559 (19) | 180 |
| O9—H9 | 0.84 | 1.82 | 2.6504 (19) | 168 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .