Literature DB >> 21588852

Tetra-aqua(2,2'-bipyridine-κN,N')magnesium(II) bis-(4-bromo-benzoate).

Bi-Song Zhang, Chang-Sheng Wu, Wei Xu.   

Abstract

In the complex cation of the title compound, [Mg(C(10)H(8)N(2))(n class="Chemical">H(2)O)(4)](C(7)H(4)BrO(2))(2), the Mg(II) atom is coordinated by two N atoms from a 2,2'-bipyridine ligand and four water O atoms in a distorted MgN(2)O(4) octa-hedral geometry. The cation is located on a special position on a twofold rotation axis which passes through the Mg(II) atom and the centroid of the 2,2'-bipyridine ligand. The 2,2'-bipyridine ligands exhibit nearly perfect coplanarity (r.m.s. deviation = 0.0035 Å) . In the crystal, O-H⋯O and C-H⋯O, C-H⋯Br hydrogen bonds and π-π stacking inter-actions [mean inter-planar distance of 3.475 (6) Å between adjacent 2,2'-bipyridine ligands] link the cations and anions into a three-dimensional supra-molecular network. One Br atom is disordered over two sites with occupancy factors of 0.55 and 0.45.

Entities:  

Year:  2010        PMID: 21588852      PMCID: PMC3009127          DOI: 10.1107/S1600536810041474

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related magnesium(II) complexes with n class="Chemical">1.10-phenanthroline and pyridine ligands, see: Halut-Desportes (1981 ▶); Hao et al. (2008 ▶); Zhang (2004 ▶).

Experimental

Crystal data

[Mg(C10H8N2)(n class="Chemical">H2O)4](C7H4BrO2)2 M = 652.56 Monoclinic, a = 30.275 (6) Å b = 12.308 (3) Å c = 7.5785 (15) Å β = 103.90 (3)° V = 2741.2 (11) Å3 Z = 4 Mo Kα radiation μ = 3.03 mm−1 T = 290 K 0.31 × 0.27 × 0.19 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.406, T max = 0.562 10517 measured reflections 2412 independent reflections 1505 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.056 wR(F 2) = 0.174 S = 1.08 2412 reflections 171 parameters 1 restraint H-atom parameters constrained Δρmax = 0.88 e Å−3 Δρmin = −0.49 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, New_Global_Publ_Block. DOI: 10.1107/S1600536810041474/rk2240sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810041474/rk2240Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mg(C10H8N2)(H2O)4](C7H4BrO2)2F(000) = 1312
Mr = 652.56Dx = 1.581 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 6277 reflections
a = 30.275 (6) Åθ = 3.2–25.0°
b = 12.308 (3) ŵ = 3.03 mm1
c = 7.5785 (15) ÅT = 290 K
β = 103.90 (3)°Block, colourless
V = 2741.2 (11) Å30.31 × 0.27 × 0.19 mm
Z = 4
Rigaku R-AXIS RAPID diffractometer2412 independent reflections
Radiation source: fine-focus sealed tube1505 reflections with I > 2σ(I)
graphiteRint = 0.063
ω–scansθmax = 25.0°, θmin = 3.2°
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)h = −35→35
Tmin = 0.406, Tmax = 0.562k = −14→14
10517 measured reflectionsl = −9→7
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.056Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.174H-atom parameters constrained
S = 1.08w = 1/[σ2(Fo2) + (0.0695P)2 + 6.5977P] where P = (Fo2 + 2Fc2)/3
2412 reflections(Δ/σ)max < 0.001
171 parametersΔρmax = 0.88 e Å3
1 restraintΔρmin = −0.49 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
Mg10.00000.29391 (14)0.25000.0366 (5)
Br10.2137 (3)0.9201 (5)0.0828 (12)0.1255 (19)0.55
Br1'0.2127 (4)0.8733 (7)0.0939 (16)0.1255 (19)0.45
N10.04459 (13)0.1518 (3)0.2599 (5)0.0410 (9)
O10.05190 (12)0.4001 (2)0.2564 (4)0.0521 (9)
H1A0.05610.45610.31660.078*
H1B0.05120.40610.14800.078*
O2−0.01205 (11)0.2973 (2)−0.0269 (4)0.0494 (8)
H2A−0.03760.3009−0.09440.074*
H2B0.00360.3273−0.08680.074*
O30.43473 (11)0.9050 (2)0.5752 (4)0.0480 (8)
O40.40497 (12)0.7957 (3)0.7472 (5)0.0646 (10)
C10.08821 (17)0.1562 (4)0.2545 (6)0.0514 (12)
H10.10240.22370.26490.062*
C20.11341 (18)0.0657 (4)0.2343 (7)0.0543 (12)
H20.14380.07170.23020.065*
C30.09216 (19)−0.0333 (4)0.2203 (7)0.0591 (13)
H30.1081−0.09590.20600.071*
C40.04759 (18)−0.0403 (4)0.2274 (6)0.0510 (12)
H40.0332−0.10740.21980.061*
C50.02400 (15)0.0542 (3)0.2461 (5)0.0393 (10)
C60.35589 (17)0.8637 (4)0.4824 (6)0.0466 (11)
C70.32382 (19)0.7824 (4)0.4683 (7)0.0623 (14)
H70.33050.72090.54110.075*
C80.2819 (2)0.7917 (6)0.3469 (9)0.0837 (19)
H80.26090.73530.33310.100*
C90.2716 (2)0.8849 (7)0.2471 (8)0.089 (2)
C100.3022 (2)0.9671 (7)0.2613 (8)0.089 (2)
H100.29461.03010.19320.106*
C110.34477 (19)0.9563 (5)0.3780 (7)0.0640 (14)
H110.36611.01170.38630.077*
C120.40163 (16)0.8535 (3)0.6125 (6)0.0423 (10)
U11U22U33U12U13U23
Mg10.0387 (12)0.0345 (10)0.0359 (10)0.0000.0074 (9)0.000
Br10.0583 (7)0.219 (6)0.0842 (12)0.038 (3)−0.0128 (6)0.011 (3)
Br1'0.0583 (7)0.219 (6)0.0842 (12)0.038 (3)−0.0128 (6)0.011 (3)
N10.043 (2)0.0397 (19)0.0380 (19)0.0001 (17)0.0041 (16)0.0003 (15)
O10.064 (2)0.0470 (17)0.0468 (18)−0.0141 (15)0.0161 (17)−0.0094 (14)
O20.047 (2)0.0625 (19)0.0367 (16)−0.0069 (16)0.0061 (14)0.0051 (14)
O30.045 (2)0.0515 (17)0.0492 (18)−0.0063 (15)0.0136 (15)−0.0062 (14)
O40.052 (2)0.078 (2)0.056 (2)−0.0141 (19)−0.0018 (17)0.0225 (18)
C10.042 (3)0.054 (3)0.057 (3)−0.004 (2)0.008 (2)0.000 (2)
C20.040 (3)0.062 (3)0.060 (3)0.015 (2)0.012 (2)0.003 (2)
C30.060 (4)0.054 (3)0.059 (3)0.016 (3)0.007 (3)−0.002 (2)
C40.053 (3)0.042 (2)0.055 (3)0.004 (2)0.008 (2)−0.001 (2)
C50.042 (3)0.041 (2)0.033 (2)0.0058 (19)0.0037 (19)0.0007 (18)
C60.041 (3)0.059 (3)0.040 (2)0.006 (2)0.011 (2)0.002 (2)
C70.049 (3)0.073 (3)0.063 (3)−0.010 (3)0.011 (3)−0.002 (3)
C80.050 (4)0.122 (5)0.076 (4)−0.020 (4)0.008 (3)−0.023 (4)
C90.046 (4)0.164 (7)0.054 (3)0.023 (4)0.009 (3)0.008 (4)
C100.063 (4)0.140 (6)0.067 (4)0.035 (4)0.023 (3)0.039 (4)
C110.052 (3)0.081 (4)0.062 (3)0.009 (3)0.019 (3)0.022 (3)
C120.040 (3)0.042 (2)0.046 (3)−0.004 (2)0.013 (2)−0.009 (2)
Mg1—O12.035 (3)C2—C31.371 (7)
Mg1—O1i2.035 (3)C2—H20.9300
Mg1—O22.042 (3)C3—C41.366 (7)
Mg1—O2i2.042 (3)C3—H30.9300
Mg1—N1i2.199 (4)C4—C51.390 (6)
Mg1—N12.199 (4)C4—H40.9300
Mg1—H1B2.3424C5—C5i1.468 (9)
Br1—C91.939 (10)C6—C71.380 (7)
Br1'—C91.885 (11)C6—C111.382 (7)
N1—C11.332 (6)C6—C121.500 (7)
N1—C51.346 (5)C7—C81.382 (8)
O1—H1A0.8200C7—H70.9300
O1—H1B0.8200C8—C91.367 (9)
O2—H2A0.8199C8—H80.9300
O2—H2B0.8201C9—C101.358 (10)
O3—C121.274 (5)C10—C111.384 (8)
O4—C121.228 (5)C10—H100.9300
C1—C21.379 (7)C11—H110.9300
C1—H10.9300
O1—Mg1—O1i100.12 (19)C1—C2—H2121.1
O1—Mg1—O287.58 (13)C4—C3—C2120.2 (5)
O1i—Mg1—O290.94 (13)C4—C3—H3119.9
O1—Mg1—O2i90.94 (13)C2—C3—H3119.9
O1i—Mg1—O2i87.58 (13)C3—C4—C5119.2 (4)
O2—Mg1—O2i177.69 (19)C3—C4—H4120.4
O1—Mg1—N1i167.24 (14)C5—C4—H4120.4
O1i—Mg1—N1i92.61 (13)N1—C5—C4121.0 (4)
O2—Mg1—N1i91.39 (13)N1—C5—C5i116.2 (2)
O2i—Mg1—N1i90.45 (13)C4—C5—C5i122.8 (3)
O1—Mg1—N192.61 (13)C7—C6—C11118.9 (5)
O1i—Mg1—N1167.24 (14)C7—C6—C12120.8 (4)
O2—Mg1—N190.45 (13)C11—C6—C12120.3 (4)
O2i—Mg1—N191.39 (13)C6—C7—C8120.5 (5)
N1i—Mg1—N174.7 (2)C6—C7—H7119.7
O1—Mg1—H1B20.1C8—C7—H7119.7
O1i—Mg1—H1B100.5C9—C8—C7119.3 (6)
O2—Mg1—H1B67.5C9—C8—H8120.4
O2i—Mg1—H1B111.0C7—C8—H8120.4
N1i—Mg1—H1B155.1C10—C9—C8121.4 (6)
N1—Mg1—H1B91.7C10—C9—Br1'129.1 (6)
C1—N1—C5118.5 (4)C8—C9—Br1'109.5 (6)
C1—N1—Mg1124.9 (3)C10—C9—Br1112.2 (6)
C5—N1—Mg1116.0 (3)C8—C9—Br1126.4 (7)
Mg1—O1—H1A124.7Br1'—C9—Br117.5 (4)
Mg1—O1—H1B101.6C9—C10—C11119.4 (6)
H1A—O1—H1B116.4C9—C10—H10120.3
Mg1—O2—H2A123.4C11—C10—H10120.3
Mg1—O2—H2B126.4C6—C11—C10120.4 (6)
H2A—O2—H2B102.4C6—C11—H11119.8
N1—C1—C2123.4 (5)C10—C11—H11119.8
N1—C1—H1118.3O4—C12—O3124.1 (4)
C2—C1—H1118.3O4—C12—C6118.3 (4)
C3—C2—C1117.7 (5)O3—C12—C6117.6 (4)
C3—C2—H2121.1
D—H···AD—HH···AD···AD—H···A
O1—H1A···O3ii0.821.892.702 (4)172
O1—H1B···O3iii0.821.842.640 (4)165
O2—H2A···O4iv0.821.862.679 (7)175
O2—H2B···O3iii0.822.082.790 (5)145
C2—H2···Br1v0.933.003.525 (7)117
C2—H2···Br1'v0.933.113.612 (7)116
C3—H3···O4vi0.932.533.239 (6)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯O3i0.821.892.702 (4)172
O1—H1B⋯O3ii0.821.842.640 (4)165
O2—H2A⋯O4iii0.821.862.679 (7)175
O2—H2B⋯O3ii0.822.082.790 (5)145
C2—H2⋯Br1iv0.933.003.525 (7)117
C2—H2⋯Br1′iv0.933.113.612 (7)116
C3—H3⋯O4v0.932.533.239 (6)133

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Tetra-aqua-(1,10-phenanthroline-κN,N')magnesium(II) bis-[(2,4-dichloro-phen-yl)acetate].

Authors:  Xiao-Min Hao; Chang-Sheng Gu; Weng-Dong Song; Ji-Wei Liu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-23
  2 in total
  1 in total

1.  Tetra-aqua-(2,2'-bipyridine-κN,N')magnesium(II) bis-(4-fluoro-benzoate).

Authors:  Bi-Song Zhang; Jian-Ping Qiu; Li-Hua Liu; Wei Xu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-11-24
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.