Literature DB >> 21588846

Poly[[μ(10)-2,3-bis(carboxymethyl)butanedioato]disodium].

Jiang Wu1, Hong-Lin Zhu.   

Abstract

The asymmetric unit of the title compound, [Na(2)(C(8)H(8)O(8))](n), contains one Na(+) ion and half of a 2,3-bis(carboxymethyl)butanedioate (H(2)BTC(2-)) dianion, which lies on a center of symmetry. The dianion exhibits a μ(10)-bridging mode. Each Na atom lies in a NaO(6) octa-hedron defined by six O atoms from five dianions. Adjacent NaO(6) octa-hedra share a common O-O edge, generating a biocta-hedron; adjacent biocta-hedra are O-O edge-connected to one another, building up a chain along [001]. The chains are connected by adjacent H(2)BTC(2-) anions into a three-dimensional framework. The structure is further stabilized by O-H⋯O hydrogen bonds.

Entities:  

Year:  2010        PMID: 21588846      PMCID: PMC3008981          DOI: 10.1107/S1600536810040857

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Delgado et al. (2007 ▶); Liu et al. (2008 ▶); Wang et al. (2005 ▶); Zheng et al. (2004 ▶); Zhu & Zheng (2010 ▶).

Experimental

Crystal data

[Na2(C8H8O8)] M = 278.12 Orthorhombic, a = 8.9053 (18) Å b = 8.6395 (17) Å c = 12.527 (3) Å V = 963.8 (3) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 293 K 0.44 × 0.36 × 0.32 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.900, T max = 0.925 8610 measured reflections 1097 independent reflections 1000 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.111 S = 1.10 1097 reflections 86 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.43 e Å−3 Δρmin = −0.22 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks ptcLa, I. DOI: 10.1107/S1600536810040857/ng5044sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810040857/ng5044Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Na2(C8H8O8)]F(000) = 568
Mr = 278.12Dx = 1.917 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 7116 reflections
a = 8.9053 (18) Åθ = 3.3–27.4°
b = 8.6395 (17) ŵ = 0.24 mm1
c = 12.527 (3) ÅT = 293 K
V = 963.8 (3) Å3Block, colorless
Z = 40.44 × 0.36 × 0.32 mm
Rigaku R-AXIS RAPID diffractometer1097 independent reflections
Radiation source: fine-focus sealed tube1000 reflections with I > 2σ(I)
graphiteRint = 0.021
Detector resolution: 0 pixels mm-1θmax = 27.4°, θmin = 3.3°
ω scanh = −11→11
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −11→11
Tmin = 0.900, Tmax = 0.925l = −16→16
8610 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.111H atoms treated by a mixture of independent and constrained refinement
S = 1.10w = 1/[σ2(Fo2) + (0.0658P)2 + 0.5154P] where P = (Fo2 + 2Fc2)/3
1097 reflections(Δ/σ)max < 0.001
86 parametersΔρmax = 0.43 e Å3
1 restraintΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Na0.91916 (8)0.06655 (8)0.62976 (5)0.0292 (2)
O11.12521 (17)0.21959 (14)0.69249 (10)0.0391 (4)
O21.30500 (16)0.37558 (13)0.75029 (10)0.0325 (3)
C11.19167 (19)0.34236 (18)0.68752 (12)0.0243 (3)
C21.15019 (18)0.46906 (17)0.61037 (11)0.0219 (3)
H2A1.23860.49630.56920.026*
H2B1.12070.55980.65080.026*
C31.02287 (16)0.42768 (14)0.53277 (10)0.0161 (3)
H3A0.93580.39270.57410.019*
C41.07185 (16)0.29671 (16)0.45770 (11)0.0177 (3)
O31.01257 (15)0.16760 (12)0.46431 (9)0.0300 (3)
O41.17325 (15)0.33112 (14)0.39020 (10)0.0300 (3)
H2C1.310 (4)0.308 (3)0.7989 (19)0.088 (11)*
U11U22U33U12U13U23
Na0.0336 (4)0.0244 (4)0.0296 (4)−0.0038 (3)0.0023 (3)−0.0031 (2)
O10.0481 (8)0.0278 (7)0.0415 (7)−0.0062 (6)−0.0172 (6)0.0104 (5)
O20.0432 (7)0.0262 (6)0.0282 (6)0.0011 (5)−0.0177 (5)0.0041 (5)
C10.0305 (8)0.0216 (7)0.0208 (7)0.0046 (6)−0.0054 (6)−0.0007 (5)
C20.0278 (7)0.0185 (7)0.0194 (7)0.0020 (6)−0.0054 (6)0.0003 (5)
C30.0208 (7)0.0137 (6)0.0138 (6)0.0032 (5)0.0005 (5)0.0002 (5)
C40.0212 (7)0.0160 (6)0.0159 (6)0.0039 (5)−0.0012 (5)−0.0008 (5)
O30.0448 (7)0.0166 (5)0.0286 (6)−0.0050 (5)0.0081 (5)−0.0041 (4)
O40.0340 (6)0.0247 (6)0.0314 (6)−0.0026 (5)0.0148 (5)−0.0082 (5)
Na—O4i2.3748 (15)O2—H2C0.843 (10)
Na—O12.3943 (15)C1—C21.506 (2)
Na—O32.3978 (13)C2—C31.536 (2)
Na—O3ii2.4188 (13)C2—H2A0.9700
Na—O2iii2.4522 (14)C2—H2B0.9700
Na—O1iv2.6196 (15)C3—C41.5346 (18)
Na—Naiv3.3388 (14)C3—C3vi1.550 (2)
Na—Naii3.7369 (14)C3—H3A0.9800
O1—C11.216 (2)C4—O31.2368 (18)
O1—Naiv2.6196 (15)C4—O41.2723 (19)
O2—C11.311 (2)O3—Naii2.4188 (13)
O2—Nav2.4522 (14)O4—Navii2.3748 (15)
O4i—Na—O1122.39 (5)C1—O1—Na146.90 (11)
O4i—Na—O395.36 (5)C1—O1—Naiv123.86 (11)
O1—Na—O379.44 (5)Na—O1—Naiv83.38 (5)
O4i—Na—O3ii119.46 (5)C1—O2—Nav146.49 (11)
O1—Na—O3ii115.41 (6)C1—O2—H2C109 (2)
O3—Na—O3ii78.24 (5)Nav—O2—H2C90 (2)
O4i—Na—O2iii86.14 (5)O1—C1—O2122.32 (14)
O1—Na—O2iii119.22 (5)O1—C1—C2123.18 (14)
O3—Na—O2iii156.69 (5)O2—C1—C2114.49 (14)
O3ii—Na—O2iii80.80 (5)C1—C2—C3114.71 (13)
O4i—Na—O1iv76.26 (5)C1—C2—H2A108.6
O1—Na—O1iv63.76 (7)C3—C2—H2A108.6
O3—Na—O1iv127.10 (5)C1—C2—H2B108.6
O3ii—Na—O1iv150.95 (5)C3—C2—H2B108.6
O2iii—Na—O1iv75.89 (5)H2A—C2—H2B107.6
O4i—Na—Naiv119.52 (4)C4—C3—C2110.47 (11)
O1—Na—Naiv51.20 (4)C4—C3—C3vi110.16 (13)
O3—Na—Naiv129.07 (5)C2—C3—C3vi109.98 (14)
O3ii—Na—Naiv109.34 (4)C4—C3—H3A108.7
O2iii—Na—Naiv68.03 (4)C2—C3—H3A108.7
O1iv—Na—Naiv45.42 (3)C3vi—C3—H3A108.7
O4i—Na—Naii112.22 (4)O3—C4—O4123.93 (13)
O1—Na—Naii99.22 (5)O3—C4—C3120.17 (12)
O3—Na—Naii39.32 (3)O4—C4—C3115.89 (12)
O3ii—Na—Naii38.92 (3)C4—O3—Na122.30 (9)
O2iii—Na—Naii119.06 (4)C4—O3—Naii127.90 (10)
O1iv—Na—Naii162.35 (5)Na—O3—Naii101.76 (5)
Naiv—Na—Naii128.23 (4)C4—O4—Navii144.24 (11)
D—H···AD—HH···AD···AD—H···A
O2—H2C···O4viii0.85 (2)1.67 (3)2.5097 (18)177 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H2C⋯O4i0.85 (2)1.67 (3)2.5097 (18)177 (2)

Symmetry code: (i) .

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