Literature DB >> 21588774

Di-n-butyl-ammonium 2-[(3,5-di-tert-butyl-4-hy-droxy-benz-yl)sulfan-yl]benzoate.

Abeer A Alhadi, Hamid Khaledi, Hapipah Mohd Ali, Marilyn M Olmstead.   

Abstract

The title salt, C(8)H(20)N(+)·C(22)H(27)O(3)S(-), is a proton-transfer compound derived from the recently reported parent carb-oxy-lic acid [Alhadi et al. (2010). Acta Cryst. E66, o1787] by the addition of a second equivalent of di-n-butyl-amine, yielding the di-n-butyl-ammonium carboxyl-ate salt. The structure of the carboxyl-ate anion resembles that of the parent carb-oxy-lic acid. The main difference lies in the position of the H atom in the 4-hy-droxy group. In the anion the O-H bond is perpendicular, rather than parallel, to the benzyl ring. This position appears to facilitate hydrogen bonding to an O atom of the carboxyl-ate group of a symmetry-related anion. In addition, there are three N-H⋯O hydrogen bonds. In contrast, the neutral species hydrogen bonds via a carboxylic acid dimer. The dihedral angle between the benzene rings in the anion is 79.19 (7)°.

Entities:  

Year:  2010        PMID: 21588774      PMCID: PMC3007956          DOI: 10.1107/S1600536810033921

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structure of the parent benzoic acid, see: Alhadi et al. (2010 ▶). For a similar structure based on nicotinic acid, see: Mansor et al. (2008 ▶).

Experimental

Crystal data

C8H20NC22H27O3S M = 501.75 Orthorhombic, a = 12.8631 (5) Å b = 20.1109 (9) Å c = 23.0930 (9) Å V = 5973.9 (4) Å3 Z = 8 Mo Kα radiation μ = 0.14 mm−1 T = 296 K 0.60 × 0.40 × 0.35 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.922, T max = 0.954 44646 measured reflections 5277 independent reflections 3311 reflections with I > 2σ(I) R int = 0.080

Refinement

R[F 2 > 2σ(F 2)] = 0.050 wR(F 2) = 0.138 S = 1.01 5277 reflections 333 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.17 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP (Bruker, 2007 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810033921/bh2302sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810033921/bh2302Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H20N+·C22H27O3SF(000) = 2192
Mr = 501.75Dx = 1.116 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 3944 reflections
a = 12.8631 (5) Åθ = 2.4–19.4°
b = 20.1109 (9) ŵ = 0.14 mm1
c = 23.0930 (9) ÅT = 296 K
V = 5973.9 (4) Å3Irregular block, colourless
Z = 80.60 × 0.40 × 0.35 mm
Bruker APEXII diffractometer5277 independent reflections
Radiation source: fine-focus sealed tube3311 reflections with I > 2σ(I)
graphiteRint = 0.080
φ and ω scansθmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −15→15
Tmin = 0.922, Tmax = 0.954k = −23→23
44646 measured reflectionsl = −27→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.050Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0533P)2 + 2.2704P] where P = (Fo2 + 2Fc2)/3
5277 reflections(Δ/σ)max < 0.001
333 parametersΔρmax = 0.28 e Å3
3 restraintsΔρmin = −0.17 e Å3
0 constraints
xyzUiso*/Ueq
C10.4142 (2)0.10279 (13)0.41431 (11)0.0573 (7)
S10.64187 (5)0.14037 (4)0.37500 (3)0.0571 (2)
O10.32489 (16)0.08674 (12)0.42807 (11)0.1060 (9)
O20.49152 (15)0.07570 (10)0.43550 (9)0.0799 (6)
O31.11548 (13)0.06947 (10)0.41947 (9)0.0676 (5)
H31.1701 (18)0.0878 (16)0.4133 (14)0.101*
N10.65789 (17)0.01880 (12)0.49304 (11)0.0639 (6)
H1A0.6030 (17)0.0360 (13)0.4749 (11)0.077*
H1B0.639 (2)−0.0157 (11)0.5148 (11)0.077*
C20.42822 (17)0.15713 (11)0.37050 (9)0.0443 (6)
C30.34012 (19)0.18891 (13)0.34973 (11)0.0552 (6)
H3A0.27540.17570.36350.066*
C40.3448 (2)0.23882 (15)0.30980 (12)0.0669 (8)
H40.28430.25910.29660.080*
C50.4395 (2)0.25874 (15)0.28939 (13)0.0732 (9)
H50.44360.29280.26230.088*
C60.5294 (2)0.22837 (14)0.30893 (12)0.0648 (7)
H60.59340.24220.29450.078*
C70.52605 (17)0.17767 (12)0.34970 (10)0.0459 (6)
C80.74329 (17)0.18495 (13)0.33648 (11)0.0579 (7)
H8A0.73540.17890.29500.069*
H8B0.73940.23210.34500.069*
C90.84580 (18)0.15715 (13)0.35632 (11)0.0512 (6)
C100.89894 (18)0.11082 (12)0.32410 (11)0.0516 (6)
H100.87160.09790.28850.062*
C110.99201 (17)0.08236 (12)0.34249 (10)0.0482 (6)
C121.02979 (17)0.10199 (12)0.39672 (10)0.0486 (6)
C130.97987 (18)0.15064 (13)0.43035 (10)0.0524 (6)
C140.88760 (18)0.17683 (13)0.40858 (11)0.0556 (7)
H140.85270.20890.43020.067*
C151.0201 (2)0.17282 (17)0.49001 (12)0.0734 (9)
C160.9545 (3)0.2305 (2)0.51411 (17)0.1397 (19)
H16A0.95770.26750.48790.209*
H16B0.98140.24360.55120.209*
H16C0.88370.21640.51830.209*
C171.0103 (3)0.1149 (2)0.53240 (13)0.1155 (15)
H17A1.05070.07800.51860.173*
H17B0.93870.10200.53550.173*
H17C1.03540.12840.56970.173*
C181.1328 (2)0.19722 (19)0.48760 (15)0.0960 (11)
H18A1.17790.16050.47900.144*
H18B1.15160.21610.52430.144*
H18C1.13950.23040.45790.144*
C191.04977 (19)0.03203 (13)0.30369 (11)0.0579 (7)
C200.9917 (2)0.02028 (16)0.24637 (13)0.0822 (9)
H20A1.0298−0.01090.22310.123*
H20B0.98540.06160.22580.123*
H20C0.92370.00280.25430.123*
C211.1572 (2)0.05973 (17)0.28782 (13)0.0846 (10)
H21A1.20010.06100.32180.127*
H21B1.14970.10390.27250.127*
H21C1.18890.03170.25920.127*
C221.0605 (2)−0.03551 (15)0.33351 (14)0.0824 (9)
H22A1.0975−0.06550.30860.124*
H22B0.9926−0.05320.34150.124*
H22C1.0980−0.03020.36910.124*
C230.7166 (4)−0.1192 (2)0.3170 (2)0.1382 (17)
H23A0.6944−0.15930.33590.207*
H23B0.7700−0.12950.28940.207*
H23C0.6585−0.09930.29740.207*
C240.7569 (3)−0.0731 (3)0.35968 (18)0.1261 (15)
H24A0.7790−0.03310.33970.151*
H24B0.8183−0.09280.37710.151*
C250.6833 (3)−0.05329 (18)0.40777 (15)0.0897 (10)
H25A0.6222−0.03250.39100.108*
H25B0.6608−0.09290.42830.108*
C260.7327 (2)−0.00614 (17)0.44985 (13)0.0771 (9)
H26A0.7892−0.02860.46960.093*
H26B0.76190.03120.42880.093*
C270.7013 (2)0.06935 (16)0.53258 (14)0.0783 (9)
H27A0.72570.10710.51020.094*
H27B0.76030.05070.55300.094*
C280.6206 (3)0.09282 (17)0.57620 (15)0.0901 (10)
H28A0.56470.11500.55570.108*
H28B0.59140.05440.59570.108*
C290.6642 (3)0.1391 (2)0.62032 (18)0.1121 (13)
H29A0.69880.17550.60060.135*
H29B0.71600.11570.64300.135*
C300.5837 (3)0.1671 (3)0.6604 (2)0.1449 (18)
H30A0.53350.19180.63840.217*
H30B0.61640.19590.68800.217*
H30C0.54940.13140.68040.217*
U11U22U33U12U13U23
C10.0437 (15)0.0638 (17)0.0644 (17)0.0003 (14)0.0004 (13)0.0071 (14)
S10.0381 (3)0.0675 (4)0.0658 (4)0.0052 (3)−0.0047 (3)0.0172 (3)
O10.0492 (12)0.1187 (19)0.150 (2)−0.0007 (12)0.0137 (13)0.0679 (17)
O20.0560 (12)0.0903 (15)0.0934 (15)0.0010 (11)−0.0136 (10)0.0372 (12)
O30.0384 (10)0.0833 (14)0.0810 (13)0.0067 (10)−0.0051 (9)0.0132 (11)
N10.0461 (13)0.0715 (17)0.0741 (17)−0.0010 (12)−0.0089 (12)0.0213 (13)
C20.0394 (13)0.0497 (14)0.0437 (13)0.0041 (11)−0.0048 (10)−0.0035 (11)
C30.0408 (14)0.0645 (17)0.0603 (16)0.0078 (12)−0.0032 (12)−0.0009 (14)
C40.0497 (16)0.080 (2)0.0707 (18)0.0224 (15)−0.0118 (13)0.0079 (16)
C50.0632 (18)0.080 (2)0.076 (2)0.0161 (16)−0.0034 (15)0.0288 (16)
C60.0465 (15)0.0763 (19)0.0715 (18)0.0088 (14)0.0009 (13)0.0221 (16)
C70.0400 (13)0.0513 (14)0.0462 (14)0.0064 (11)−0.0047 (10)0.0040 (12)
C80.0407 (14)0.0651 (17)0.0679 (17)0.0015 (13)−0.0041 (12)0.0126 (14)
C90.0388 (13)0.0586 (16)0.0562 (15)−0.0020 (12)−0.0018 (11)0.0095 (12)
C100.0429 (13)0.0609 (16)0.0510 (15)−0.0045 (13)−0.0015 (11)0.0036 (13)
C110.0379 (13)0.0557 (15)0.0512 (15)−0.0006 (11)0.0068 (11)0.0065 (12)
C120.0309 (12)0.0614 (16)0.0536 (15)−0.0005 (12)0.0056 (11)0.0088 (12)
C130.0375 (13)0.0700 (17)0.0497 (15)−0.0021 (12)0.0020 (11)0.0026 (13)
C140.0413 (14)0.0644 (17)0.0612 (17)0.0033 (12)0.0051 (12)−0.0020 (13)
C150.0501 (16)0.113 (2)0.0569 (18)0.0101 (17)−0.0042 (13)−0.0163 (17)
C160.106 (3)0.208 (5)0.105 (3)0.055 (3)−0.034 (2)−0.092 (3)
C170.072 (2)0.217 (5)0.058 (2)−0.007 (3)−0.0067 (17)0.031 (3)
C180.070 (2)0.128 (3)0.090 (2)−0.016 (2)−0.0125 (17)−0.031 (2)
C190.0473 (15)0.0646 (17)0.0616 (17)0.0025 (13)0.0091 (12)−0.0025 (14)
C200.084 (2)0.091 (2)0.071 (2)0.0077 (18)0.0033 (17)−0.0192 (18)
C210.0661 (19)0.102 (3)0.086 (2)−0.0117 (18)0.0308 (16)−0.0162 (19)
C220.079 (2)0.069 (2)0.099 (2)0.0095 (17)0.0052 (18)0.0039 (18)
C230.154 (4)0.123 (3)0.138 (4)0.040 (3)−0.021 (3)−0.026 (3)
C240.081 (3)0.181 (5)0.116 (3)0.021 (3)−0.007 (2)−0.011 (3)
C250.071 (2)0.099 (3)0.099 (3)0.0172 (19)−0.0035 (19)0.003 (2)
C260.0496 (17)0.098 (2)0.084 (2)0.0130 (17)−0.0005 (15)0.0249 (19)
C270.0577 (18)0.088 (2)0.089 (2)−0.0107 (17)−0.0169 (16)0.0154 (18)
C280.069 (2)0.095 (3)0.107 (3)−0.0073 (19)−0.0078 (19)−0.009 (2)
C290.090 (3)0.130 (3)0.117 (3)−0.010 (2)−0.009 (2)−0.021 (3)
C300.105 (3)0.183 (5)0.147 (4)−0.021 (3)0.022 (3)−0.055 (4)
C1—O21.235 (3)C17—H17B0.9600
C1—O11.235 (3)C17—H17C0.9600
C1—C21.500 (3)C18—H18A0.9600
S1—C71.767 (2)C18—H18B0.9600
S1—C81.816 (2)C18—H18C0.9600
O3—C121.385 (3)C19—C221.529 (4)
O3—H30.806 (18)C19—C211.534 (4)
N1—C261.474 (4)C19—C201.538 (4)
N1—C271.476 (4)C20—H20A0.9600
N1—H1A0.890 (17)C20—H20B0.9600
N1—H1B0.892 (17)C20—H20C0.9600
C2—C31.387 (3)C21—H21A0.9600
C2—C71.409 (3)C21—H21B0.9600
C3—C41.364 (4)C21—H21C0.9600
C3—H3A0.9300C22—H22A0.9600
C4—C51.366 (4)C22—H22B0.9600
C4—H40.9300C22—H22C0.9600
C5—C61.383 (3)C23—C241.450 (5)
C5—H50.9300C23—H23A0.9600
C6—C71.389 (3)C23—H23B0.9600
C6—H60.9300C23—H23C0.9600
C8—C91.504 (3)C24—C251.513 (5)
C8—H8A0.9700C24—H24A0.9700
C8—H8B0.9700C24—H24B0.9700
C9—C101.374 (3)C25—C261.499 (4)
C9—C141.379 (3)C25—H25A0.9700
C10—C111.393 (3)C25—H25B0.9700
C10—H100.9300C26—H26A0.9700
C11—C121.400 (3)C26—H26B0.9700
C11—C191.543 (3)C27—C281.521 (4)
C12—C131.405 (3)C27—H27A0.9700
C13—C141.392 (3)C27—H27B0.9700
C13—C151.538 (4)C28—C291.490 (5)
C14—H140.9300C28—H28A0.9700
C15—C171.526 (5)C28—H28B0.9700
C15—C181.532 (4)C29—C301.498 (5)
C15—C161.538 (4)C29—H29A0.9700
C16—H16A0.9600C29—H29B0.9700
C16—H16B0.9600C30—H30A0.9600
C16—H16C0.9600C30—H30B0.9600
C17—H17A0.9600C30—H30C0.9600
O2—C1—O1122.1 (3)H18A—C18—H18C109.5
O2—C1—C2119.5 (2)H18B—C18—H18C109.5
O1—C1—C2118.4 (2)C22—C19—C21110.4 (2)
C7—S1—C8103.55 (11)C22—C19—C20107.2 (2)
C12—O3—H3114 (3)C21—C19—C20106.7 (2)
C26—N1—C27114.0 (2)C22—C19—C11111.4 (2)
C26—N1—H1A109.4 (18)C21—C19—C11109.5 (2)
C27—N1—H1A108.8 (18)C20—C19—C11111.5 (2)
C26—N1—H1B107.3 (18)C19—C20—H20A109.5
C27—N1—H1B106.9 (18)C19—C20—H20B109.5
H1A—N1—H1B110 (3)H20A—C20—H20B109.5
C3—C2—C7118.5 (2)C19—C20—H20C109.5
C3—C2—C1118.1 (2)H20A—C20—H20C109.5
C7—C2—C1123.4 (2)H20B—C20—H20C109.5
C4—C3—C2122.5 (2)C19—C21—H21A109.5
C4—C3—H3A118.8C19—C21—H21B109.5
C2—C3—H3A118.8H21A—C21—H21B109.5
C3—C4—C5119.2 (2)C19—C21—H21C109.5
C3—C4—H4120.4H21A—C21—H21C109.5
C5—C4—H4120.4H21B—C21—H21C109.5
C4—C5—C6120.2 (3)C19—C22—H22A109.5
C4—C5—H5119.9C19—C22—H22B109.5
C6—C5—H5119.9H22A—C22—H22B109.5
C5—C6—C7121.3 (2)C19—C22—H22C109.5
C5—C6—H6119.4H22A—C22—H22C109.5
C7—C6—H6119.4H22B—C22—H22C109.5
C6—C7—C2118.3 (2)C24—C23—H23A109.5
C6—C7—S1120.62 (18)C24—C23—H23B109.5
C2—C7—S1121.05 (17)H23A—C23—H23B109.5
C9—C8—S1107.30 (17)C24—C23—H23C109.5
C9—C8—H8A110.3H23A—C23—H23C109.5
S1—C8—H8A110.3H23B—C23—H23C109.5
C9—C8—H8B110.3C23—C24—C25116.3 (4)
S1—C8—H8B110.3C23—C24—H24A108.2
H8A—C8—H8B108.5C25—C24—H24A108.2
C10—C9—C14118.3 (2)C23—C24—H24B108.2
C10—C9—C8121.6 (2)C25—C24—H24B108.2
C14—C9—C8120.1 (2)H24A—C24—H24B107.4
C9—C10—C11122.7 (2)C26—C25—C24112.1 (3)
C9—C10—H10118.6C26—C25—H25A109.2
C11—C10—H10118.6C24—C25—H25A109.2
C10—C11—C12117.1 (2)C26—C25—H25B109.2
C10—C11—C19120.4 (2)C24—C25—H25B109.2
C12—C11—C19122.5 (2)H25A—C25—H25B107.9
O3—C12—C11118.8 (2)N1—C26—C25112.2 (2)
O3—C12—C13118.9 (2)N1—C26—H26A109.2
C11—C12—C13122.2 (2)C25—C26—H26A109.2
C14—C13—C12117.0 (2)N1—C26—H26B109.2
C14—C13—C15120.0 (2)C25—C26—H26B109.2
C12—C13—C15122.9 (2)H26A—C26—H26B107.9
C9—C14—C13122.7 (2)N1—C27—C28111.4 (2)
C9—C14—H14118.7N1—C27—H27A109.3
C13—C14—H14118.7C28—C27—H27A109.3
C17—C15—C18110.2 (3)N1—C27—H27B109.3
C17—C15—C13109.0 (3)C28—C27—H27B109.3
C18—C15—C13112.2 (2)H27A—C27—H27B108.0
C17—C15—C16107.4 (3)C29—C28—C27113.0 (3)
C18—C15—C16106.9 (3)C29—C28—H28A109.0
C13—C15—C16111.0 (2)C27—C28—H28A109.0
C15—C16—H16A109.5C29—C28—H28B109.0
C15—C16—H16B109.5C27—C28—H28B109.0
H16A—C16—H16B109.5H28A—C28—H28B107.8
C15—C16—H16C109.5C28—C29—C30113.4 (3)
H16A—C16—H16C109.5C28—C29—H29A108.9
H16B—C16—H16C109.5C30—C29—H29A108.9
C15—C17—H17A109.5C28—C29—H29B108.9
C15—C17—H17B109.5C30—C29—H29B108.9
H17A—C17—H17B109.5H29A—C29—H29B107.7
C15—C17—H17C109.5C29—C30—H30A109.5
H17A—C17—H17C109.5C29—C30—H30B109.5
H17B—C17—H17C109.5H30A—C30—H30B109.5
C15—C18—H18A109.5C29—C30—H30C109.5
C15—C18—H18B109.5H30A—C30—H30C109.5
H18A—C18—H18B109.5H30B—C30—H30C109.5
C15—C18—H18C109.5
D—H···AD—HH···AD···AD—H···A
O3—H3···O1i0.81 (2)2.02 (2)2.723 (3)146 (3)
N1—H1A···O20.89 (2)1.88 (2)2.767 (3)177 (3)
N1—H1B···O1ii0.89 (2)2.00 (2)2.806 (3)150 (3)
N1—H1B···O2ii0.89 (2)2.36 (2)3.167 (3)150 (2)
N1—H1B···O2ii0.89 (2)2.36 (2)3.167 (3)150 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O1i0.81 (2)2.02 (2)2.723 (3)146 (3)
N1—H1A⋯O20.89 (2)1.88 (2)2.767 (3)177 (3)
N1—H1B⋯O1ii0.89 (2)2.00 (2)2.806 (3)150 (3)
N1—H1B⋯O2ii0.89 (2)2.36 (2)3.167 (3)150 (2)
N1—H1B⋯O2ii0.89 (2)2.36 (2)3.167 (3)150 (2)

Symmetry codes: (i) ; (ii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Di-n-butyl-ammonium 2-(3,5-di-tert-butyl-4-hydroxy-benzyl-sulfan-yl)nicotinate.

Authors:  Shahirah Mansor; Wagee A Yehye; Azhar Ariffin; Noorsaadah Abdul Rahman; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-20

3.  2-[(3,5-Di-tert-butyl-4-hy-droxy-benz-yl)sulfan-yl]benzoic acid.

Authors:  Abeer A Alhadi; Hamid Khaledi; Hapipah Mohd Ali; Marilyn M Olmstead
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26
  3 in total

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