Literature DB >> 21588718

rac-(3aR,6aR)-(E)-Methyl 2-(3a-methyl-perhydro-furo[3,2-b]furan-2-yl-idene)acetate.

Lenka Bellovičová, Jozef Kožíšek, Jana Doháňošová, Angelika Lásiková, Tibor Gracza.   

Abstract

The constitution and relative configuration at the stereogenic centres and stereochemistry of the C-C double bond formed during Pd(II)-catalysed domino reaction was established by X-ray analysis of the title compound, C(10)H(14)O(4). The asymmetric unit contains two mol-ecules.

Entities:  

Year:  2010        PMID: 21588718      PMCID: PMC3007948          DOI: 10.1107/S1600536810032101

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound was prepared from 4-methyl­pent-4-en-1,3-diol (Breit & Zahn, 2001 ▶) by a modified procedure for carbonyl­ation of alkene-3-ol (Semmelhack & Epa, 1993 ▶).

Experimental

Crystal data

C10H14O4 M = 198.21 Monoclinic, a = 12.159 (1) Å b = 5.8100 (3) Å c = 28.509 (1) Å β = 101.51 (1)° V = 1973.5 (2) Å3 Z = 8 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.84 × 0.36 × 0.12 mm

Data collection

Oxford Diffraction Gemini R CCD diffractometer Absorption correction: analytical [CrysAlis PRO (Oxford Diffraction, 2010 ▶); analytical numeric absorption correction using a multi-faceted crystal model based on expressions derived by Clark & Reid (1995 ▶)] T min = 0.941, T max = 0.988 59312 measured reflections 4033 independent reflections 3571 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.091 S = 1.05 4025 reflections 254 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.22 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2009 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: enCIFer (Allen et al., 2004 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810032101/bv2142sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810032101/bv2142Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H14O4F(000) = 848
Mr = 198.21Dx = 1.334 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 35551 reflections
a = 12.159 (1) Åθ = 3.6–29.5°
b = 5.8100 (3) ŵ = 0.10 mm1
c = 28.509 (1) ÅT = 293 K
β = 101.51 (1)°Block, colorless
V = 1973.5 (2) Å30.84 × 0.36 × 0.12 mm
Z = 8
Oxford Diffraction Gemini R CCD diffractometer4033 independent reflections
Radiation source: Enhance (Mo) X-ray Source3571 reflections with I > 2σ(I)
graphiteRint = 0.024
Detector resolution: 10.4340 pixels mm-1θmax = 26.4°, θmin = 3.6°
Rotation method data acquisition using ω and φ scansh = −15→15
Absorption correction: analytical [CrysAlis PRO (Oxford Diffraction, 2010); analytical numeric absorption correction using a multi-faceted crystal model based on expressions derived by Clark & Reid (1995)]k = −7→7
Tmin = 0.941, Tmax = 0.988l = −35→35
59312 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.036H-atom parameters constrained
wR(F2) = 0.091w = 1/[σ2(Fo2) + (0.0375P)2 + 1.2579P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
4025 reflectionsΔρmax = 0.32 e Å3
254 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0031 (7)
Experimental. CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.62 (release 16-03-2010 CrysAlis171 .NET) (compiled Mar 16 2010,16:26:05) Analytical numeric absorption correction using a multifaceted crystal model based on expressions derived by R.C. Clark & J.S. Reid. (Clark, R. C. & Reid, J. S. (1995). Acta Cryst. A51, 887-897)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.independent reflections were 4033, 7 inconsistent equivalents, 4025 were used in the refinement
xyzUiso*/Ueq
C20.35925 (10)0.2368 (2)0.34753 (4)0.0173 (3)
C30.35197 (10)0.4998 (2)0.34359 (4)0.0174 (3)
H3A0.40740.56380.32650.021*
C40.36899 (10)0.5847 (2)0.39470 (4)0.0195 (3)
H4B0.33190.73110.39670.023*
H4A0.44810.59970.40890.023*
C50.31418 (11)0.3932 (2)0.41825 (4)0.0212 (3)
H5B0.34750.38290.45210.025*
H5A0.23440.42140.41490.025*
C70.18323 (10)0.3541 (2)0.30141 (4)0.0177 (3)
C80.26323 (10)0.1555 (2)0.30792 (4)0.0192 (3)
H8B0.28970.12370.27860.023*
H8A0.22820.01800.31750.023*
C90.47359 (10)0.1376 (2)0.34558 (5)0.0212 (3)
H9C0.4713−0.02700.34840.025*
H9B0.52860.19890.37150.025*
H9A0.49330.17790.31570.025*
C100.07393 (10)0.3673 (2)0.28094 (4)0.0197 (3)
H10A0.03790.50890.27990.024*
C110.01014 (10)0.1674 (2)0.26033 (4)0.0189 (3)
C14−0.16945 (12)0.0392 (3)0.22261 (6)0.0306 (3)
H14C−0.24460.09460.21180.037*
H14B−0.1693−0.07910.24610.037*
H14A−0.1416−0.02250.19600.037*
C160.86595 (10)0.9608 (2)0.38508 (4)0.0190 (3)
C170.96259 (11)1.0068 (2)0.42723 (4)0.0200 (3)
H17A0.95891.16010.44120.024*
C181.06680 (11)0.9721 (2)0.40691 (5)0.0247 (3)
H18B1.13030.92770.43160.030*
H18A1.08571.10980.39100.030*
C191.03089 (11)0.7781 (3)0.37159 (5)0.0255 (3)
H19B1.07140.78550.34560.031*
H19A1.04520.62990.38730.031*
C210.85362 (10)0.7177 (2)0.45081 (4)0.0177 (3)
C220.78158 (10)0.8268 (2)0.40773 (4)0.0206 (3)
H22B0.72640.92900.41690.025*
H22A0.74310.71110.38590.025*
C230.81782 (12)1.1718 (2)0.35705 (5)0.0270 (3)
H23C0.75811.12630.33140.032*
H23B0.87561.24670.34420.032*
H23A0.78931.27600.37790.032*
C240.83161 (10)0.5412 (2)0.47796 (4)0.0190 (3)
H24A0.88720.49030.50310.023*
C250.72309 (11)0.4285 (2)0.46889 (4)0.0201 (3)
C280.61577 (12)0.1322 (3)0.49483 (5)0.0279 (3)
H28C0.62340.00620.51700.033*
H28B0.59130.07510.46280.033*
H28A0.56150.23950.50210.033*
O10.33343 (8)0.18484 (15)0.39400 (3)0.0210 (2)
O60.23724 (7)0.54910 (15)0.31945 (3)0.0197 (2)
O120.04472 (8)−0.02687 (16)0.25726 (3)0.0231 (2)
O13−0.09856 (7)0.22621 (17)0.24354 (3)0.0248 (2)
O150.91270 (7)0.81006 (17)0.35392 (3)0.0232 (2)
O200.95504 (7)0.82156 (16)0.46110 (3)0.0205 (2)
O260.64051 (8)0.48260 (19)0.43955 (4)0.0318 (3)
O270.72256 (7)0.24603 (16)0.49859 (3)0.0239 (2)
U11U22U33U12U13U23
C20.0185 (6)0.0160 (6)0.0180 (6)−0.0016 (5)0.0051 (5)−0.0007 (5)
C30.0155 (6)0.0168 (6)0.0198 (6)−0.0014 (5)0.0032 (4)0.0003 (5)
C40.0191 (6)0.0178 (6)0.0204 (6)0.0004 (5)0.0012 (5)−0.0026 (5)
C50.0257 (6)0.0192 (6)0.0193 (6)0.0023 (5)0.0059 (5)−0.0015 (5)
C70.0227 (6)0.0163 (6)0.0147 (5)−0.0028 (5)0.0050 (5)−0.0003 (5)
C80.0192 (6)0.0168 (6)0.0217 (6)−0.0007 (5)0.0041 (5)−0.0019 (5)
C90.0190 (6)0.0199 (6)0.0246 (6)0.0001 (5)0.0044 (5)−0.0008 (5)
C100.0214 (6)0.0181 (6)0.0189 (6)0.0016 (5)0.0024 (5)−0.0004 (5)
C110.0195 (6)0.0226 (6)0.0150 (5)−0.0006 (5)0.0041 (5)0.0002 (5)
C140.0212 (7)0.0321 (8)0.0356 (8)−0.0056 (6)−0.0011 (6)−0.0088 (6)
C160.0199 (6)0.0196 (6)0.0176 (6)0.0025 (5)0.0041 (5)−0.0012 (5)
C170.0246 (6)0.0179 (6)0.0168 (6)−0.0026 (5)0.0022 (5)0.0013 (5)
C180.0198 (6)0.0295 (7)0.0242 (6)−0.0041 (5)0.0029 (5)0.0051 (6)
C190.0200 (6)0.0307 (7)0.0265 (7)0.0047 (5)0.0062 (5)0.0011 (6)
C210.0163 (6)0.0210 (6)0.0160 (6)0.0008 (5)0.0032 (4)−0.0031 (5)
C220.0178 (6)0.0242 (6)0.0195 (6)0.0029 (5)0.0029 (5)0.0025 (5)
C230.0314 (7)0.0261 (7)0.0234 (6)0.0069 (6)0.0052 (5)0.0065 (6)
C240.0166 (6)0.0231 (6)0.0165 (6)0.0007 (5)0.0012 (4)0.0012 (5)
C250.0206 (6)0.0233 (6)0.0171 (6)−0.0001 (5)0.0055 (5)−0.0002 (5)
C280.0256 (7)0.0306 (7)0.0281 (7)−0.0105 (6)0.0070 (5)0.0010 (6)
O10.0282 (5)0.0169 (4)0.0198 (4)−0.0007 (4)0.0090 (4)0.0002 (3)
O60.0196 (4)0.0157 (4)0.0214 (4)−0.0003 (3)−0.0013 (3)−0.0007 (3)
O120.0236 (5)0.0209 (5)0.0239 (5)−0.0012 (4)0.0029 (4)−0.0036 (4)
O130.0181 (4)0.0262 (5)0.0274 (5)−0.0016 (4)−0.0014 (4)−0.0060 (4)
O150.0203 (5)0.0283 (5)0.0209 (4)0.0026 (4)0.0038 (4)−0.0062 (4)
O200.0195 (4)0.0232 (5)0.0175 (4)−0.0042 (4)0.0003 (3)0.0037 (4)
O260.0184 (5)0.0438 (6)0.0305 (5)−0.0051 (4)−0.0022 (4)0.0121 (5)
O270.0211 (5)0.0237 (5)0.0264 (5)−0.0046 (4)0.0033 (4)0.0048 (4)
C2—O11.4529 (14)C16—O151.4424 (15)
C2—C91.5164 (17)C16—C231.5157 (18)
C2—C81.5283 (17)C16—C171.5274 (17)
C2—C31.5333 (17)C16—C221.5297 (17)
C3—O61.4555 (14)C17—O201.4610 (15)
C3—C41.5131 (17)C17—C181.5082 (18)
C3—H3A0.9800C17—H17A0.9800
C4—C51.5203 (18)C18—C191.517 (2)
C4—H4B0.9700C18—H18B0.9700
C4—H4A0.9700C18—H18A0.9700
C5—O11.4359 (15)C19—O151.4369 (15)
C5—H5B0.9700C19—H19B0.9700
C5—H5A0.9700C19—H19A0.9700
C7—C101.3428 (18)C21—C241.3433 (18)
C7—O61.3581 (15)C21—O201.3516 (15)
C7—C81.4967 (17)C21—C221.4994 (17)
C8—H8B0.9700C22—H22B0.9700
C8—H8A0.9700C22—H22A0.9700
C9—H9C0.9600C23—H23C0.9600
C9—H9B0.9600C23—H23B0.9600
C9—H9A0.9600C23—H23A0.9600
C10—C111.4537 (17)C24—C251.4494 (17)
C10—H10A0.9300C24—H24A0.9300
C11—O121.2139 (16)C25—O261.2131 (16)
C11—O131.3565 (15)C25—O271.3576 (16)
C14—O131.4403 (16)C28—O271.4420 (15)
C14—H14C0.9600C28—H28C0.9600
C14—H14B0.9600C28—H28B0.9600
C14—H14A0.9600C28—H28A0.9600
O1—C2—C9108.71 (10)O15—C16—C22109.33 (10)
O1—C2—C8109.72 (10)C23—C16—C22114.41 (11)
C9—C2—C8115.22 (10)C17—C16—C22103.44 (10)
O1—C2—C3104.73 (10)O20—C17—C18108.89 (10)
C9—C2—C3114.60 (10)O20—C17—C16104.54 (10)
C8—C2—C3103.27 (10)C18—C17—C16104.34 (10)
O6—C3—C4108.98 (10)O20—C17—H17A112.8
O6—C3—C2105.46 (9)C18—C17—H17A112.8
C4—C3—C2105.03 (10)C16—C17—H17A112.8
O6—C3—H3A112.3C17—C18—C19101.64 (10)
C4—C3—H3A112.3C17—C18—H18B111.4
C2—C3—H3A112.3C19—C18—H18B111.4
C3—C4—C5101.48 (10)C17—C18—H18A111.4
C3—C4—H4B111.5C19—C18—H18A111.4
C5—C4—H4B111.5H18B—C18—H18A109.3
C3—C4—H4A111.5O15—C19—C18105.78 (11)
C5—C4—H4A111.5O15—C19—H19B110.6
H4B—C4—H4A109.3C18—C19—H19B110.6
O1—C5—C4106.05 (10)O15—C19—H19A110.6
O1—C5—H5B110.5C18—C19—H19A110.6
C4—C5—H5B110.5H19B—C19—H19A108.7
O1—C5—H5A110.5C24—C21—O20119.59 (11)
C4—C5—H5A110.5C24—C21—C22130.07 (11)
H5B—C5—H5A108.7O20—C21—C22110.34 (11)
C10—C7—O6118.61 (11)C21—C22—C16103.27 (10)
C10—C7—C8131.31 (12)C21—C22—H22B111.1
O6—C7—C8110.06 (10)C16—C22—H22B111.1
C7—C8—C2103.59 (10)C21—C22—H22A111.1
C7—C8—H8B111.0C16—C22—H22A111.1
C2—C8—H8B111.0H22B—C22—H22A109.1
C7—C8—H8A111.0C16—C23—H23C109.5
C2—C8—H8A111.0C16—C23—H23B109.5
H8B—C8—H8A109.0H23C—C23—H23B109.5
C2—C9—H9C109.5C16—C23—H23A109.5
C2—C9—H9B109.5H23C—C23—H23A109.5
H9C—C9—H9B109.5H23B—C23—H23A109.5
C2—C9—H9A109.5C21—C24—C25121.40 (11)
H9C—C9—H9A109.5C21—C24—H24A119.3
H9B—C9—H9A109.5C25—C24—H24A119.3
C7—C10—C11122.15 (12)O26—C25—O27121.75 (12)
C7—C10—H10A118.9O26—C25—C24127.21 (12)
C11—C10—H10A118.9O27—C25—C24111.04 (11)
O12—C11—O13122.40 (12)O27—C28—H28C109.5
O12—C11—C10127.40 (12)O27—C28—H28B109.5
O13—C11—C10110.20 (11)H28C—C28—H28B109.5
O13—C14—H14C109.5O27—C28—H28A109.5
O13—C14—H14B109.5H28C—C28—H28A109.5
H14C—C14—H14B109.5H28B—C28—H28A109.5
O13—C14—H14A109.5C5—O1—C2110.45 (9)
H14C—C14—H14A109.5C7—O6—C3111.12 (9)
H14B—C14—H14A109.5C11—O13—C14114.63 (11)
O15—C16—C23108.93 (10)C19—O15—C16110.61 (9)
O15—C16—C17104.78 (10)C21—O20—C17111.13 (9)
C23—C16—C17115.38 (11)C25—O27—C28115.34 (10)
O1—C2—C3—O6−92.66 (10)O20—C21—C22—C1616.47 (13)
C9—C2—C3—O6148.3 (1)O15—C16—C22—C2185.89 (11)
C8—C2—C3—O622.21 (12)C23—C16—C22—C21−151.64 (11)
O1—C2—C3—C422.4 (1)C17—C16—C22—C21−25.31 (12)
C9—C2—C3—C4−96.62 (12)O20—C21—C24—C25178.52 (11)
C8—C2—C3—C4137.27 (10)C22—C21—C24—C25−2.3 (2)
O6—C3—C4—C579.11 (11)C21—C24—C25—O26−4.7 (2)
C2—C3—C4—C5−33.49 (12)C21—C24—C25—O27175.91 (11)
C3—C4—C5—O133.07 (12)C4—C5—O1—C2−20.25 (13)
C10—C7—C8—C2−161.49 (13)C9—C2—O1—C5121.59 (11)
O6—C7—C8—C219.87 (13)C8—C2—O1—C5−111.59 (11)
O1—C2—C8—C786.28 (11)C3—C2—O1—C5−1.33 (13)
C9—C2—C8—C7−150.66 (10)C10—C7—O6—C3175.36 (11)
C3—C2—C8—C7−24.94 (12)C8—C7—O6—C3−5.81 (13)
O6—C7—C10—C11179.36 (11)C4—C3—O6—C7−123.13 (11)
C8—C7—C10—C110.8 (2)C2—C3—O6—C7−10.82 (13)
C7—C10—C11—O12−2.6 (2)O12—C11—O13—C140.98 (17)
C7—C10—C11—O13177.98 (11)C10—C11—O13—C14−179.57 (11)
O15—C16—C17—O20−88.79 (11)C18—C19—O15—C16−17.45 (14)
C23—C16—C17—O20151.4 (1)C23—C16—O15—C19119.00 (12)
C22—C16—C17—O2025.73 (12)C17—C16—O15—C19−4.99 (13)
O15—C16—C17—C1825.5 (1)C22—C16—O15—C19−115.31 (11)
C23—C16—C17—C18−94.26 (13)C24—C21—O20—C17179.38 (11)
C22—C16—C17—C18140.03 (11)C22—C21—O20—C170.07 (14)
O20—C17—C18—C1976.14 (12)C18—C17—O20—C21−127.75 (11)
C16—C17—C18—C19−35.04 (13)C16—C17—O20—C21−16.70 (13)
C17—C18—C19—O1532.43 (13)O26—C25—O27—C28−3.84 (18)
C24—C21—C22—C16−162.75 (13)C24—C25—O27—C28175.63 (11)
  2 in total

1.  Stereoselective hydroformylation: key step for the assembly of polypropionate subunits.

Authors:  B Breit; S K Zahn
Journal:  J Org Chem       Date:  2001-07-13       Impact factor: 4.354

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total

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