| Literature DB >> 21588684 |
Alan J Lough, Justin W Hicks, John F Valliant, Alan A Wilson, Neil Vasdev.
Abstract
The title compound, C(11)H(10)N(4)O(4)S, is a derivative of N-(4-meth-oxy-benz-yl)-N'-(5-nitro-1,3-thia-zol-2-yl)urea (AR-A014418), a known glycogen synthase kinase 3β (GSK-3β) inhibitor. All non-H atoms in the mol-ecule are essentially coplanar, with an r.m.s. deviation of 0.045 Å and a maximum deviation of 0.115 (2) Å for the carbonyl O atom. In the crystal structure, mol-ecules are linked via N-H⋯O hydrogen bonds into one-dimensional chains along [101].Entities:
Year: 2010 PMID: 21588684 PMCID: PMC3008116 DOI: 10.1107/S1600536810032186
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H10N4O4S | |
| Monoclinic, | Melting point: 454 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 3592 reflections | |
| θ = 2.6–27.5° | |
| µ = 0.28 mm−1 | |
| β = 101.622 (3)° | |
| Block, red | |
| 0.28 × 0.24 × 0.22 mm |
| Nonius KappaCCD diffractometer | 2825 independent reflections |
| Radiation source: fine-focus sealed tube | 1979 reflections with |
| graphite | |
| Detector resolution: 9 pixels mm-1 | θmax = 27.5°, θmin = 2.8° |
| φ scans and ω scans with κ offsets | |
| Absorption correction: multi-scan ( | |
| 8106 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2825 reflections | (Δ/σ)max < 0.001 |
| 190 parameters | Δρmax = 0.38 e Å−3 |
| 0 restraints | Δρmin = −0.51 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.12900 (8) | 0.68571 (5) | 0.41433 (3) | 0.0246 (2) | |
| O1 | 0.2254 (2) | 0.48461 (14) | 0.47569 (10) | 0.0306 (4) | |
| O2 | 0.5006 (3) | 0.00530 (13) | 0.62455 (11) | 0.0340 (4) | |
| O3 | −0.0126 (3) | 0.97318 (14) | 0.33409 (11) | 0.0347 (4) | |
| O4 | 0.0063 (3) | 0.82488 (15) | 0.25900 (11) | 0.0367 (5) | |
| N1 | 0.2026 (3) | 0.79137 (16) | 0.57084 (12) | 0.0277 (5) | |
| N2 | 0.2668 (3) | 0.61085 (16) | 0.58904 (13) | 0.0268 (5) | |
| H2N | 0.327 (4) | 0.627 (2) | 0.6449 (19) | 0.042 (8)* | |
| N3 | 0.3514 (3) | 0.44014 (16) | 0.62860 (13) | 0.0253 (5) | |
| H3N | 0.380 (4) | 0.466 (2) | 0.6845 (19) | 0.037 (8)* | |
| N4 | 0.0257 (3) | 0.87648 (16) | 0.33258 (13) | 0.0270 (5) | |
| C1 | 0.0930 (3) | 0.82155 (19) | 0.41566 (14) | 0.0232 (5) | |
| C2 | 0.1399 (3) | 0.8632 (2) | 0.50308 (15) | 0.0267 (5) | |
| H2A | 0.1292 | 0.9369 | 0.5153 | 0.032* | |
| C3 | 0.2033 (3) | 0.69504 (18) | 0.53334 (15) | 0.0224 (5) | |
| C4 | 0.2790 (3) | 0.50759 (19) | 0.55815 (15) | 0.0243 (5) | |
| C5 | 0.3832 (3) | 0.32879 (18) | 0.62462 (15) | 0.0223 (5) | |
| C6 | 0.3583 (3) | 0.2717 (2) | 0.54193 (15) | 0.0245 (5) | |
| H6A | 0.3153 | 0.3064 | 0.4839 | 0.029* | |
| C7 | 0.3970 (3) | 0.1640 (2) | 0.54544 (15) | 0.0258 (5) | |
| H7A | 0.3791 | 0.1245 | 0.4892 | 0.031* | |
| C8 | 0.4620 (3) | 0.11186 (19) | 0.63008 (15) | 0.0253 (5) | |
| C9 | 0.4842 (4) | 0.1688 (2) | 0.71214 (16) | 0.0281 (6) | |
| H9A | 0.5265 | 0.1342 | 0.7702 | 0.034* | |
| C10 | 0.4439 (4) | 0.2773 (2) | 0.70889 (16) | 0.0277 (5) | |
| H10A | 0.4583 | 0.3164 | 0.7651 | 0.033* | |
| C11 | 0.5519 (4) | −0.0525 (2) | 0.70992 (17) | 0.0360 (6) | |
| H11A | 0.5715 | −0.1276 | 0.6965 | 0.054* | |
| H11B | 0.4446 | −0.0460 | 0.7445 | 0.054* | |
| H11C | 0.6749 | −0.0236 | 0.7472 | 0.054* |
| S1 | 0.0269 (3) | 0.0260 (4) | 0.0198 (3) | 0.0001 (2) | 0.0024 (2) | −0.0017 (2) |
| O1 | 0.0405 (10) | 0.0273 (10) | 0.0225 (9) | 0.0016 (8) | 0.0028 (7) | −0.0024 (7) |
| O2 | 0.0482 (11) | 0.0242 (9) | 0.0304 (9) | 0.0047 (8) | 0.0097 (8) | 0.0018 (7) |
| O3 | 0.0418 (11) | 0.0279 (10) | 0.0335 (10) | 0.0046 (8) | 0.0057 (8) | 0.0080 (8) |
| O4 | 0.0450 (11) | 0.0437 (12) | 0.0193 (8) | 0.0073 (9) | 0.0015 (7) | −0.0019 (8) |
| N1 | 0.0368 (12) | 0.0251 (11) | 0.0214 (10) | 0.0020 (9) | 0.0059 (8) | −0.0009 (8) |
| N2 | 0.0352 (12) | 0.0240 (11) | 0.0205 (10) | 0.0011 (9) | 0.0040 (8) | −0.0033 (9) |
| N3 | 0.0315 (11) | 0.0238 (11) | 0.0204 (10) | 0.0003 (9) | 0.0048 (8) | −0.0014 (9) |
| N4 | 0.0239 (11) | 0.0318 (12) | 0.0250 (10) | 0.0008 (9) | 0.0041 (8) | 0.0044 (9) |
| C1 | 0.0226 (12) | 0.0249 (13) | 0.0223 (11) | 0.0005 (10) | 0.0049 (9) | 0.0036 (10) |
| C2 | 0.0310 (13) | 0.0242 (13) | 0.0246 (12) | 0.0003 (10) | 0.0046 (9) | −0.0005 (10) |
| C3 | 0.0241 (12) | 0.0231 (13) | 0.0206 (11) | −0.0022 (9) | 0.0063 (8) | −0.0015 (9) |
| C4 | 0.0243 (12) | 0.0251 (13) | 0.0247 (12) | −0.0007 (10) | 0.0079 (9) | −0.0009 (10) |
| C5 | 0.0206 (11) | 0.0247 (13) | 0.0226 (11) | −0.0003 (9) | 0.0070 (8) | 0.0002 (10) |
| C6 | 0.0233 (12) | 0.0285 (14) | 0.0219 (11) | 0.0006 (10) | 0.0051 (9) | 0.0007 (10) |
| C7 | 0.0253 (12) | 0.0293 (14) | 0.0233 (11) | −0.0025 (10) | 0.0063 (9) | −0.0030 (10) |
| C8 | 0.0257 (12) | 0.0214 (12) | 0.0309 (12) | 0.0006 (10) | 0.0105 (9) | 0.0002 (10) |
| C9 | 0.0310 (13) | 0.0314 (14) | 0.0231 (11) | 0.0006 (11) | 0.0087 (9) | 0.0044 (10) |
| C10 | 0.0338 (14) | 0.0273 (13) | 0.0235 (12) | 0.0006 (11) | 0.0097 (10) | −0.0020 (10) |
| C11 | 0.0477 (16) | 0.0261 (14) | 0.0345 (14) | 0.0045 (12) | 0.0089 (11) | 0.0074 (11) |
| S1—C3 | 1.723 (2) | C1—C2 | 1.364 (3) |
| S1—C1 | 1.728 (2) | C2—H2A | 0.9500 |
| O1—C4 | 1.227 (3) | C5—C10 | 1.385 (3) |
| O2—C8 | 1.373 (3) | C5—C6 | 1.391 (3) |
| O2—C11 | 1.431 (3) | C6—C7 | 1.381 (3) |
| O3—N4 | 1.246 (3) | C6—H6A | 0.9500 |
| O4—N4 | 1.245 (2) | C7—C8 | 1.397 (3) |
| N1—C3 | 1.332 (3) | C7—H7A | 0.9500 |
| N1—C2 | 1.349 (3) | C8—C9 | 1.384 (3) |
| N2—C3 | 1.356 (3) | C9—C10 | 1.391 (3) |
| N2—C4 | 1.384 (3) | C9—H9A | 0.9500 |
| N2—H2N | 0.86 (3) | C10—H10A | 0.9500 |
| N3—C4 | 1.353 (3) | C11—H11A | 0.9800 |
| N3—C5 | 1.421 (3) | C11—H11B | 0.9800 |
| N3—H3N | 0.87 (3) | C11—H11C | 0.9800 |
| N4—C1 | 1.398 (3) | ||
| C3—S1—C1 | 86.27 (11) | C10—C5—C6 | 120.0 (2) |
| C8—O2—C11 | 117.49 (19) | C10—C5—N3 | 116.5 (2) |
| C3—N1—C2 | 109.40 (18) | C6—C5—N3 | 123.5 (2) |
| C3—N2—C4 | 124.68 (19) | C7—C6—C5 | 119.0 (2) |
| C3—N2—H2N | 115.2 (19) | C7—C6—H6A | 120.5 |
| C4—N2—H2N | 118.6 (19) | C5—C6—H6A | 120.5 |
| C4—N3—C5 | 128.5 (2) | C6—C7—C8 | 121.3 (2) |
| C4—N3—H3N | 117.8 (18) | C6—C7—H7A | 119.4 |
| C5—N3—H3N | 113.6 (18) | C8—C7—H7A | 119.4 |
| O4—N4—O3 | 122.61 (19) | O2—C8—C9 | 124.7 (2) |
| O4—N4—C1 | 117.3 (2) | O2—C8—C7 | 115.9 (2) |
| O3—N4—C1 | 120.09 (19) | C9—C8—C7 | 119.4 (2) |
| C2—C1—N4 | 127.3 (2) | C8—C9—C10 | 119.5 (2) |
| C2—C1—S1 | 112.58 (17) | C8—C9—H9A | 120.3 |
| N4—C1—S1 | 120.16 (17) | C10—C9—H9A | 120.3 |
| N1—C2—C1 | 114.6 (2) | C5—C10—C9 | 120.8 (2) |
| N1—C2—H2A | 122.7 | C5—C10—H10A | 119.6 |
| C1—C2—H2A | 122.7 | C9—C10—H10A | 119.6 |
| N1—C3—N2 | 119.29 (19) | O2—C11—H11A | 109.5 |
| N1—C3—S1 | 117.15 (17) | O2—C11—H11B | 109.5 |
| N2—C3—S1 | 123.53 (17) | H11A—C11—H11B | 109.5 |
| O1—C4—N3 | 126.7 (2) | O2—C11—H11C | 109.5 |
| O1—C4—N2 | 121.2 (2) | H11A—C11—H11C | 109.5 |
| N3—C4—N2 | 112.05 (19) | H11B—C11—H11C | 109.5 |
| H··· | ||||
| N2—H2N···O4i | 0.86 (3) | 1.97 (3) | 2.817 (3) | 168 (3) |
| N3—H3N···O3i | 0.87 (3) | 2.30 (3) | 3.168 (2) | 174 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2N⋯O4i | 0.86 (3) | 1.97 (3) | 2.817 (3) | 168 (3) |
| N3—H3N⋯O3i | 0.87 (3) | 2.30 (3) | 3.168 (2) | 174 (2) |
Symmetry code: (i) .