Literature DB >> 21588638

1-Chloro-acetyl-2,6-bis-(2-chloro-phen-yl)-3,5-dimethyl-piperidin-4-one.

R Ramachandran, P Parthiban, M Rani, S Kabilan, Yeon Tae Jeong.   

Abstract

In the title compound, C(21)H(20)Cl(3)NO(2), the piperidin-4-one ring adopts a boat conformation. The two 2-chloro-phenyl groups are approximately perpendicular to each other, making a dihedral angle of 74.07 (8)°.

Entities:  

Year:  2010        PMID: 21588638      PMCID: PMC3007827          DOI: 10.1107/S1600536810031247

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of related structures, see: Parthiban et al. (2009 ▶); Aridoss et al. (2007 ▶). For spectroscopic studies of piperidin-4-ones, see: Ravindran et al. (1991 ▶); Krishnakumar et al. (1996 ▶). For ring conformational analysis, see: Cremer & Pople (1975 ▶); Nardelli (1983 ▶). For the synthesis of the title compound, see: Ramachandran et al. (2008 ▶); Aridoss et al. (2010 ▶).

Experimental

Crystal data

C21H20Cl3NO2 M = 424.73 Monoclinic, a = 11.6295 (4) Å b = 9.6955 (3) Å c = 17.4743 (5) Å β = 90.481 (1)° V = 1970.22 (11) Å3 Z = 4 Mo Kα radiation μ = 0.48 mm−1 T = 293 K 0.22 × 0.16 × 0.16 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (Blessing, 1995 ▶) T min = 0.901, T max = 0.927 27536 measured reflections 6864 independent reflections 4998 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.141 S = 1.01 6864 reflections 244 parameters H-atom parameters constrained Δρmax = 0.40 e Å−3 Δρmin = −0.31 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810031247/ez2226sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810031247/ez2226Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H20Cl3NO2F(000) = 880
Mr = 424.73Dx = 1.432 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 5467 reflections
a = 11.6295 (4) Åθ = 2.1–25.0°
b = 9.6955 (3) ŵ = 0.48 mm1
c = 17.4743 (5) ÅT = 293 K
β = 90.481 (1)°Prism, colourless
V = 1970.22 (11) Å30.22 × 0.16 × 0.16 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer6864 independent reflections
Radiation source: fine-focus sealed tube4998 reflections with I > 2σ(I)
graphiteRint = 0.023
ω and φ scanθmax = 32.1°, θmin = 2.1°
Absorption correction: multi-scan (Blessing, 1995)h = −17→17
Tmin = 0.901, Tmax = 0.927k = −14→14
27536 measured reflectionsl = −26→26
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0727P)2 + 0.5226P] where P = (Fo2 + 2Fc2)/3
6864 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.85514 (12)0.37161 (13)−0.00740 (8)0.0341 (3)
H1A0.87460.4692−0.00040.041*
C20.96025 (12)0.30363 (15)−0.04343 (8)0.0385 (3)
H2A1.02370.3032−0.00620.046*
C30.93368 (13)0.15720 (15)−0.06701 (9)0.0415 (3)
C40.80789 (13)0.11575 (13)−0.07058 (8)0.0368 (3)
H4A0.78390.0981−0.01780.044*
C50.73061 (12)0.23387 (13)−0.10157 (7)0.0340 (2)
H5A0.74560.2437−0.15640.041*
C60.82292 (12)0.31664 (14)0.07135 (7)0.0346 (3)
C70.73896 (13)0.37879 (15)0.11624 (8)0.0393 (3)
C80.70953 (16)0.32934 (19)0.18766 (9)0.0505 (4)
H8A0.65190.37240.21550.061*
C90.76589 (18)0.2157 (2)0.21762 (9)0.0562 (4)
H9A0.74570.18100.26530.067*
C100.85181 (17)0.15487 (18)0.17638 (10)0.0529 (4)
H10A0.89110.07940.19650.063*
C110.88047 (14)0.20513 (16)0.10491 (9)0.0432 (3)
H11A0.94000.16330.07830.052*
C120.99879 (15)0.37953 (19)−0.11617 (10)0.0494 (4)
H12A1.06470.3339−0.13710.074*
H12B1.01840.4731−0.10360.074*
H12C0.93730.3790−0.15320.074*
C130.79149 (17)−0.01856 (16)−0.11449 (11)0.0516 (4)
H13A0.8409−0.0882−0.09310.077*
H13B0.8104−0.0044−0.16730.077*
H13C0.7129−0.0478−0.11080.077*
C140.60451 (13)0.19672 (14)−0.09241 (8)0.0380 (3)
C150.53718 (15)0.14574 (17)−0.15177 (10)0.0491 (4)
C160.42350 (17)0.1070 (2)−0.14119 (13)0.0619 (5)
H16A0.38090.0702−0.18160.074*
C170.37424 (16)0.12352 (19)−0.07036 (14)0.0614 (5)
H17A0.29780.0989−0.06300.074*
C180.43777 (16)0.17623 (19)−0.01064 (12)0.0548 (4)
H18A0.40410.18890.03690.066*
C190.55201 (14)0.21042 (16)−0.02132 (9)0.0432 (3)
H19A0.59490.24340.01990.052*
C200.73202 (12)0.49115 (14)−0.09783 (8)0.0379 (3)
C210.63849 (16)0.48474 (18)−0.15890 (10)0.0514 (4)
H21A0.57010.4434−0.13740.062*
H21B0.66400.4265−0.20060.062*
O11.01004 (12)0.07846 (14)−0.08337 (10)0.0692 (4)
O20.77569 (11)0.59995 (11)−0.07971 (7)0.0528 (3)
N10.75946 (10)0.36719 (11)−0.06397 (6)0.0326 (2)
Cl10.66924 (4)0.52622 (4)0.08431 (3)0.05574 (13)
Cl20.59251 (5)0.13268 (7)−0.24418 (3)0.07505 (18)
Cl30.60408 (4)0.64954 (5)−0.19502 (3)0.06205 (14)
U11U22U33U12U13U23
C10.0384 (6)0.0286 (6)0.0353 (6)0.0014 (5)−0.0026 (5)0.0020 (4)
C20.0353 (6)0.0382 (7)0.0421 (7)0.0015 (5)0.0007 (5)0.0047 (5)
C30.0434 (7)0.0362 (7)0.0452 (7)0.0071 (6)0.0061 (6)0.0042 (5)
C40.0440 (7)0.0285 (6)0.0379 (6)0.0028 (5)0.0056 (5)−0.0003 (5)
C50.0386 (6)0.0313 (6)0.0320 (6)0.0013 (5)0.0025 (5)−0.0023 (4)
C60.0407 (6)0.0305 (6)0.0325 (6)0.0025 (5)−0.0022 (5)−0.0009 (5)
C70.0441 (7)0.0364 (6)0.0373 (6)0.0048 (5)−0.0030 (5)−0.0051 (5)
C80.0543 (9)0.0583 (9)0.0390 (7)0.0055 (7)0.0056 (7)−0.0077 (7)
C90.0723 (11)0.0619 (10)0.0345 (7)0.0008 (9)0.0044 (7)0.0058 (7)
C100.0677 (11)0.0490 (9)0.0419 (8)0.0094 (8)−0.0027 (7)0.0106 (6)
C110.0509 (8)0.0402 (7)0.0386 (7)0.0104 (6)−0.0005 (6)0.0041 (6)
C120.0462 (8)0.0539 (9)0.0482 (8)−0.0054 (7)0.0069 (7)0.0089 (7)
C130.0646 (10)0.0333 (7)0.0571 (9)0.0017 (7)0.0077 (8)−0.0078 (6)
C140.0404 (7)0.0328 (6)0.0410 (7)−0.0012 (5)0.0011 (5)−0.0040 (5)
C150.0493 (8)0.0474 (8)0.0504 (8)−0.0004 (7)−0.0060 (7)−0.0089 (7)
C160.0525 (10)0.0523 (10)0.0804 (13)−0.0082 (8)−0.0200 (9)−0.0034 (9)
C170.0431 (9)0.0483 (9)0.0929 (15)−0.0075 (7)0.0031 (9)0.0139 (9)
C180.0503 (9)0.0458 (8)0.0686 (11)−0.0028 (7)0.0156 (8)0.0093 (8)
C190.0464 (8)0.0377 (7)0.0455 (7)−0.0033 (6)0.0074 (6)−0.0003 (6)
C200.0412 (7)0.0346 (6)0.0379 (6)0.0049 (5)0.0015 (5)0.0057 (5)
C210.0559 (9)0.0466 (8)0.0516 (9)0.0061 (7)−0.0126 (7)0.0126 (7)
O10.0535 (7)0.0504 (7)0.1039 (12)0.0162 (6)0.0167 (7)−0.0077 (7)
O20.0664 (8)0.0322 (5)0.0596 (7)−0.0005 (5)−0.0111 (6)0.0084 (5)
N10.0375 (5)0.0277 (5)0.0325 (5)0.0015 (4)−0.0017 (4)0.0018 (4)
Cl10.0653 (3)0.0465 (2)0.0555 (2)0.02331 (18)0.00334 (19)−0.00359 (17)
Cl20.0761 (3)0.1018 (4)0.0471 (2)0.0034 (3)−0.0109 (2)−0.0279 (2)
Cl30.0654 (3)0.0601 (3)0.0607 (3)0.0222 (2)−0.0028 (2)0.0202 (2)
C1—N11.4828 (17)C11—H11A0.9300
C1—C61.5253 (18)C12—H12A0.9600
C1—C21.5291 (19)C12—H12B0.9600
C1—H1A0.9800C12—H12C0.9600
C2—C31.510 (2)C13—H13A0.9600
C2—C121.539 (2)C13—H13B0.9600
C2—H2A0.9800C13—H13C0.9600
C3—O11.2072 (18)C14—C151.386 (2)
C3—C41.518 (2)C14—C191.395 (2)
C4—C131.523 (2)C15—C161.388 (3)
C4—C51.5506 (19)C15—Cl21.7480 (19)
C4—H4A0.9800C16—C171.378 (3)
C5—N11.4871 (17)C16—H16A0.9300
C5—C141.520 (2)C17—C181.372 (3)
C5—H5A0.9800C17—H17A0.9300
C6—C71.3946 (19)C18—C191.383 (2)
C6—C111.3979 (19)C18—H18A0.9300
C7—C81.383 (2)C19—H19A0.9300
C7—Cl11.7333 (15)C20—O21.2117 (19)
C8—C91.382 (3)C20—N11.3760 (16)
C8—H8A0.9300C20—C211.519 (2)
C9—C101.370 (3)C21—Cl31.7628 (16)
C9—H9A0.9300C21—H21A0.9700
C10—C111.384 (2)C21—H21B0.9700
C10—H10A0.9300
N1—C1—C6113.75 (11)C6—C11—H11A118.9
N1—C1—C2108.12 (11)C2—C12—H12A109.5
C6—C1—C2115.10 (11)C2—C12—H12B109.5
N1—C1—H1A106.4H12A—C12—H12B109.5
C6—C1—H1A106.4C2—C12—H12C109.5
C2—C1—H1A106.4H12A—C12—H12C109.5
C3—C2—C1110.81 (12)H12B—C12—H12C109.5
C3—C2—C12106.54 (13)C4—C13—H13A109.5
C1—C2—C12111.93 (12)C4—C13—H13B109.5
C3—C2—H2A109.2H13A—C13—H13B109.5
C1—C2—H2A109.2C4—C13—H13C109.5
C12—C2—H2A109.2H13A—C13—H13C109.5
O1—C3—C2120.67 (15)H13B—C13—H13C109.5
O1—C3—C4122.25 (15)C15—C14—C19116.86 (14)
C2—C3—C4117.08 (12)C15—C14—C5123.05 (13)
C3—C4—C13111.32 (13)C19—C14—C5120.08 (13)
C3—C4—C5111.98 (11)C14—C15—C16121.98 (17)
C13—C4—C5112.70 (13)C14—C15—Cl2120.50 (13)
C3—C4—H4A106.8C16—C15—Cl2117.50 (14)
C13—C4—H4A106.8C17—C16—C15119.46 (18)
C5—C4—H4A106.8C17—C16—H16A120.3
N1—C5—C14111.94 (10)C15—C16—H16A120.3
N1—C5—C4111.08 (11)C18—C17—C16120.09 (17)
C14—C5—C4110.19 (11)C18—C17—H17A120.0
N1—C5—H5A107.8C16—C17—H17A120.0
C14—C5—H5A107.8C17—C18—C19119.88 (18)
C4—C5—H5A107.8C17—C18—H18A120.1
C7—C6—C11115.67 (13)C19—C18—H18A120.1
C7—C6—C1122.34 (12)C18—C19—C14121.68 (16)
C11—C6—C1121.90 (12)C18—C19—H19A119.2
C8—C7—C6122.53 (14)C14—C19—H19A119.2
C8—C7—Cl1117.25 (12)O2—C20—N1123.57 (13)
C6—C7—Cl1120.20 (11)O2—C20—C21121.02 (13)
C9—C8—C7119.87 (15)N1—C20—C21115.37 (13)
C9—C8—H8A120.1C20—C21—Cl3111.94 (12)
C7—C8—H8A120.1C20—C21—H21A109.2
C10—C9—C8119.31 (15)Cl3—C21—H21A109.2
C10—C9—H9A120.3C20—C21—H21B109.2
C8—C9—H9A120.3Cl3—C21—H21B109.2
C9—C10—C11120.33 (16)H21A—C21—H21B107.9
C9—C10—H10A119.8C20—N1—C1115.56 (11)
C11—C10—H10A119.8C20—N1—C5121.24 (11)
C10—C11—C6122.20 (15)C1—N1—C5119.01 (10)
C10—C11—H11A118.9
N1—C1—C2—C3−58.03 (14)C1—C6—C11—C10179.89 (15)
C6—C1—C2—C370.37 (15)N1—C5—C14—C15136.19 (14)
N1—C1—C2—C1260.74 (15)C4—C5—C14—C15−99.67 (16)
C6—C1—C2—C12−170.85 (12)N1—C5—C14—C19−45.29 (17)
C1—C2—C3—O1−166.27 (15)C4—C5—C14—C1978.86 (16)
C12—C2—C3—O171.75 (19)C19—C14—C15—C16−1.4 (2)
C1—C2—C3—C414.92 (17)C5—C14—C15—C16177.20 (16)
C12—C2—C3—C4−107.06 (14)C19—C14—C15—Cl2176.79 (12)
O1—C3—C4—C13−13.9 (2)C5—C14—C15—Cl2−4.6 (2)
C2—C3—C4—C13164.91 (13)C14—C15—C16—C172.2 (3)
O1—C3—C4—C5−141.05 (16)Cl2—C15—C16—C17−176.06 (15)
C2—C3—C4—C537.74 (17)C15—C16—C17—C18−0.8 (3)
C3—C4—C5—N1−46.40 (15)C16—C17—C18—C19−1.2 (3)
C13—C4—C5—N1−172.84 (12)C17—C18—C19—C142.0 (3)
C3—C4—C5—C14−171.04 (11)C15—C14—C19—C18−0.7 (2)
C13—C4—C5—C1462.52 (15)C5—C14—C19—C18−179.31 (14)
N1—C1—C6—C7−62.84 (17)O2—C20—C21—Cl3−1.2 (2)
C2—C1—C6—C7171.62 (13)N1—C20—C21—Cl3176.76 (11)
N1—C1—C6—C11120.85 (14)O2—C20—N1—C1−5.4 (2)
C2—C1—C6—C11−4.69 (19)C21—C20—N1—C1176.75 (13)
C11—C6—C7—C8−3.4 (2)O2—C20—N1—C5−162.10 (14)
C1—C6—C7—C8−179.97 (14)C21—C20—N1—C520.01 (19)
C11—C6—C7—Cl1174.97 (12)C6—C1—N1—C20123.99 (12)
C1—C6—C7—Cl1−1.55 (19)C2—C1—N1—C20−106.85 (13)
C6—C7—C8—C91.4 (3)C6—C1—N1—C5−78.72 (14)
Cl1—C7—C8—C9−177.11 (14)C2—C1—N1—C550.45 (14)
C7—C8—C9—C101.0 (3)C14—C5—N1—C20−78.22 (15)
C8—C9—C10—C11−1.1 (3)C4—C5—N1—C20158.14 (12)
C9—C10—C11—C6−1.2 (3)C14—C5—N1—C1125.81 (12)
C7—C6—C11—C103.4 (2)C4—C5—N1—C12.17 (16)
  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  An empirical correction for absorption anisotropy.

Authors:  R H Blessing
Journal:  Acta Crystallogr A       Date:  1995-01-01       Impact factor: 2.290

3.  1-Bromo-acetyl-2,6-bis-(4-methoxy-phen-yl)-3,5-dimethyl-piperidin-4-one.

Authors:  R Ramachandran; G Aridoss; D Velmurugan; S Kabilan; Y T Jeong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-27

4.  Synthesis, spectral, crystal and antimicrobial studies of biologically potent oxime ethers of nitrogen, oxygen and sulfur heterocycles.

Authors:  Paramasivam Parthiban; Gopalakrishnan Aridoss; Paramasivam Rathika; Venkatachalam Ramkumar; Senthamaraikannan Kabilan
Journal:  Bioorg Med Chem Lett       Date:  2009-04-18       Impact factor: 2.823

5.  1-(2-Bromo-acet-yl)-3-methyl-2,6-diphenyl-piperidin-4-one.

Authors:  G Aridoss; S Sundaramoorthy; D Velmurugan; K S Park; Y T Jeong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-29
  5 in total

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