Literature DB >> 21588603

10-(2-Eth-oxy-1,3-thia-zol-5-yl)-10-hy-droxy-phenanthren-9(10H)-one.

Hoong-Kun Fun, Jia Hao Goh, Yang Liu, Yan Zhang.   

Abstract

In the title compound, C(19)H(15)NO(3)S, the dihydro-phenanthrene unit is not planar, its central ring being distorted towards a sofa conformation. The essentially planar thia-zole ring [maximum deviation = 0.005 (1) Å] is inclined at a dihedral angle of 85.29 (5)° with respect to the mean plane formed through the dihydro-phenanthrene unit. In the crystal structure, pairs of inter-molecular C-H⋯O hydrogen bonds link adjacent mol-ecules into inversion dimers. Inter-molecular O-H⋯N hydrogen bonds further inter-connect these dimers into chains along the a axis. The crystal structure is further stabilized by weak inter-molecular C-H⋯π inter-actions involving the thia-zole ring.

Entities:  

Year:  2010        PMID: 21588603      PMCID: PMC3008141          DOI: 10.1107/S1600536810031004

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of phenanthrenone derivatives, see: Schuetzle (1983 ▶); Cho et al. (2004 ▶); Lim et al. (1998 ▶); Sanbongi et al. (2003 ▶); Shurygina et al. (2008 ▶); Zhang et al. (2004 ▶); Lichtenthaler et al. (2004 ▶); Cutignano et al. (2001 ▶); Williams et al. (2001 ▶); DeRoy & Charette (2003 ▶); Yoshimura et al. (1995 ▶); Tsuruni et al. (1995 ▶); Gao et al. (2010 ▶); Shi et al. (2010 ▶); Kaleta et al. (2006 ▶). For ring conformations, see: Cremer & Pople (1975 ▶). For a closely related phenanthrenone structure, see: Wang et al. (2003 ▶). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C19H15NO3S M = 337.38 Triclinic, a = 7.1386 (4) Å b = 9.6206 (6) Å c = 12.7743 (8) Å α = 106.863 (2)° β = 97.746 (2)° γ = 104.667 (2)° V = 791.41 (8) Å3 Z = 2 Mo Kα radiation μ = 0.22 mm−1 T = 100 K 0.40 × 0.31 × 0.20 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.916, T max = 0.958 16288 measured reflections 4157 independent reflections 3811 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.139 S = 1.12 4157 reflections 222 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.96 e Å−3 Δρmin = −0.51 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810031004/bt5320sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810031004/bt5320Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H15NO3SZ = 2
Mr = 337.38F(000) = 352
Triclinic, P1Dx = 1.416 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.1386 (4) ÅCell parameters from 9610 reflections
b = 9.6206 (6) Åθ = 3.0–35.0°
c = 12.7743 (8) ŵ = 0.22 mm1
α = 106.863 (2)°T = 100 K
β = 97.746 (2)°Block, colourless
γ = 104.667 (2)°0.40 × 0.31 × 0.20 mm
V = 791.41 (8) Å3
Bruker APEXII DUO CCD area-detector diffractometer4157 independent reflections
Radiation source: fine-focus sealed tube3811 reflections with I > 2σ(I)
graphiteRint = 0.023
φ and ω scansθmax = 29.0°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −9→9
Tmin = 0.916, Tmax = 0.958k = −13→13
16288 measured reflectionsl = −17→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.042Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.139H atoms treated by a mixture of independent and constrained refinement
S = 1.12w = 1/[σ2(Fo2) + (0.086P)2 + 0.3384P] where P = (Fo2 + 2Fc2)/3
4157 reflections(Δ/σ)max < 0.001
222 parametersΔρmax = 0.96 e Å3
0 restraintsΔρmin = −0.51 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S1−0.03580 (5)−0.12894 (4)0.11117 (3)0.01623 (12)
O10.39811 (18)−0.00646 (13)0.31190 (10)0.0235 (2)
O20.36598 (16)0.12494 (13)0.15415 (9)0.0185 (2)
O3−0.42108 (15)−0.26001 (11)0.04040 (8)0.0161 (2)
N1−0.30774 (17)0.00285 (13)0.14259 (9)0.0143 (2)
C10.3195 (2)0.09376 (16)0.33170 (11)0.0154 (3)
C20.2699 (2)0.15724 (15)0.44016 (11)0.0145 (3)
C30.2670 (2)0.07575 (17)0.51513 (12)0.0181 (3)
H3A0.2985−0.01510.49630.022*
C40.2174 (2)0.12966 (18)0.61688 (12)0.0213 (3)
H4A0.21490.07540.66650.026*
C50.1715 (2)0.26594 (19)0.64427 (12)0.0234 (3)
H5A0.13400.30110.71160.028*
C60.1809 (2)0.35008 (17)0.57240 (12)0.0204 (3)
H6A0.15310.44240.59320.024*
C70.23147 (19)0.29845 (15)0.46916 (11)0.0143 (3)
C80.2552 (2)0.38983 (16)0.39351 (11)0.0153 (3)
C90.2628 (2)0.54351 (17)0.42843 (13)0.0202 (3)
H9A0.24930.58970.50060.024*
C100.2901 (2)0.62833 (17)0.35718 (14)0.0228 (3)
H10A0.29360.73010.38160.027*
C110.3123 (2)0.56129 (18)0.24976 (14)0.0230 (3)
H11A0.33210.61840.20240.028*
C120.3050 (2)0.40867 (17)0.21277 (13)0.0191 (3)
H12A0.31890.36370.14050.023*
C130.2769 (2)0.32302 (16)0.28379 (12)0.0151 (3)
C140.2567 (2)0.15402 (15)0.23775 (11)0.0140 (3)
C150.0382 (2)0.06559 (15)0.18794 (11)0.0139 (3)
C16−0.1246 (2)0.11260 (15)0.19485 (11)0.0151 (3)
H16A−0.11420.21360.23280.018*
C17−0.2804 (2)−0.12792 (15)0.09691 (11)0.0134 (2)
C18−0.6223 (2)−0.24987 (16)0.01743 (12)0.0168 (3)
H18A−0.6257−0.1734−0.01770.020*
H18B−0.6678−0.22210.08660.020*
C19−0.7522 (2)−0.40515 (19)−0.06037 (15)0.0277 (3)
H19A−0.8874−0.4047−0.07580.042*
H19B−0.7438−0.4801−0.02560.042*
H19C−0.7082−0.4296−0.12930.042*
H1O20.446 (4)0.075 (3)0.170 (2)0.046 (7)*
U11U22U33U12U13U23
S10.01308 (18)0.01435 (18)0.02028 (19)0.00675 (13)0.00430 (13)0.00202 (13)
O10.0287 (6)0.0282 (6)0.0238 (5)0.0196 (5)0.0105 (4)0.0121 (4)
O20.0193 (5)0.0265 (5)0.0193 (5)0.0148 (4)0.0105 (4)0.0122 (4)
O30.0133 (5)0.0149 (5)0.0187 (5)0.0051 (4)0.0016 (4)0.0042 (4)
N10.0137 (5)0.0156 (5)0.0150 (5)0.0066 (4)0.0038 (4)0.0052 (4)
C10.0134 (6)0.0174 (6)0.0160 (6)0.0051 (5)0.0032 (5)0.0060 (5)
C20.0120 (6)0.0160 (6)0.0143 (6)0.0041 (5)0.0023 (4)0.0038 (5)
C30.0163 (6)0.0181 (6)0.0192 (6)0.0046 (5)0.0019 (5)0.0070 (5)
C40.0214 (7)0.0250 (7)0.0165 (6)0.0034 (6)0.0025 (5)0.0096 (5)
C50.0257 (8)0.0275 (7)0.0146 (6)0.0056 (6)0.0068 (5)0.0050 (6)
C60.0230 (7)0.0202 (6)0.0176 (6)0.0086 (5)0.0066 (5)0.0032 (5)
C70.0118 (6)0.0164 (6)0.0139 (6)0.0046 (5)0.0019 (5)0.0041 (5)
C80.0110 (6)0.0172 (6)0.0175 (6)0.0051 (5)0.0013 (5)0.0060 (5)
C90.0191 (7)0.0174 (6)0.0216 (7)0.0065 (5)0.0010 (5)0.0037 (5)
C100.0201 (7)0.0160 (6)0.0304 (8)0.0057 (5)0.0004 (6)0.0071 (6)
C110.0221 (7)0.0211 (7)0.0272 (7)0.0053 (6)0.0028 (6)0.0127 (6)
C120.0181 (6)0.0206 (7)0.0204 (6)0.0065 (5)0.0038 (5)0.0094 (5)
C130.0116 (6)0.0170 (6)0.0181 (6)0.0059 (5)0.0031 (5)0.0072 (5)
C140.0133 (6)0.0166 (6)0.0142 (6)0.0069 (5)0.0042 (5)0.0061 (5)
C150.0142 (6)0.0137 (6)0.0141 (6)0.0053 (5)0.0042 (5)0.0038 (4)
C160.0148 (6)0.0147 (6)0.0169 (6)0.0068 (5)0.0039 (5)0.0050 (5)
C170.0132 (6)0.0162 (6)0.0126 (5)0.0062 (5)0.0034 (4)0.0056 (5)
C180.0127 (6)0.0193 (6)0.0195 (6)0.0060 (5)0.0028 (5)0.0077 (5)
C190.0177 (7)0.0236 (7)0.0327 (8)0.0031 (6)−0.0008 (6)0.0020 (6)
S1—C171.7335 (14)C7—C81.4821 (19)
S1—C151.7430 (14)C8—C91.3994 (19)
O1—C11.2161 (18)C8—C131.4100 (19)
O2—C141.4105 (16)C9—C101.389 (2)
O2—H1O20.87 (3)C9—H9A0.9300
O3—C171.3308 (16)C10—C111.386 (2)
O3—C181.4606 (17)C10—H10A0.9300
N1—C171.3003 (17)C11—C121.391 (2)
N1—C161.3880 (17)C11—H11A0.9300
C1—C21.4728 (19)C12—C131.3933 (19)
C1—C141.5388 (19)C12—H12A0.9300
C2—C31.4019 (19)C13—C141.5211 (19)
C2—C71.4079 (19)C14—C151.5189 (19)
C3—C41.382 (2)C15—C161.3543 (19)
C3—H3A0.9300C16—H16A0.9300
C4—C51.390 (2)C18—C191.506 (2)
C4—H4A0.9300C18—H18A0.9700
C5—C61.387 (2)C18—H18B0.9700
C5—H5A0.9300C19—H19A0.9600
C6—C71.3984 (19)C19—H19B0.9600
C6—H6A0.9300C19—H19C0.9600
C17—S1—C1588.43 (6)C10—C11—H11A120.0
C14—O2—H1O2110.0 (18)C12—C11—H11A120.0
C17—O3—C18115.16 (11)C11—C12—C13120.15 (14)
C17—N1—C16109.10 (11)C11—C12—H12A119.9
O1—C1—C2123.78 (13)C13—C12—H12A119.9
O1—C1—C14119.33 (12)C12—C13—C8120.47 (13)
C2—C1—C14116.81 (12)C12—C13—C14118.51 (12)
C3—C2—C7120.73 (13)C8—C13—C14120.90 (12)
C3—C2—C1118.45 (13)O2—C14—C15109.48 (11)
C7—C2—C1120.80 (12)O2—C14—C13111.05 (11)
C4—C3—C2120.36 (14)C15—C14—C13108.38 (11)
C4—C3—H3A119.8O2—C14—C1110.69 (11)
C2—C3—H3A119.8C15—C14—C1105.45 (11)
C3—C4—C5119.26 (13)C13—C14—C1111.60 (11)
C3—C4—H4A120.4C16—C15—C14130.07 (12)
C5—C4—H4A120.4C16—C15—S1109.29 (10)
C6—C5—C4120.78 (14)C14—C15—S1120.62 (10)
C6—C5—H5A119.6C15—C16—N1116.81 (12)
C4—C5—H5A119.6C15—C16—H16A121.6
C5—C6—C7121.10 (14)N1—C16—H16A121.6
C5—C6—H6A119.5N1—C17—O3126.45 (12)
C7—C6—H6A119.5N1—C17—S1116.37 (10)
C6—C7—C2117.69 (13)O3—C17—S1117.18 (10)
C6—C7—C8122.51 (13)O3—C18—C19106.62 (12)
C2—C7—C8119.73 (12)O3—C18—H18A110.4
C9—C8—C13118.16 (13)C19—C18—H18A110.4
C9—C8—C7122.03 (13)O3—C18—H18B110.4
C13—C8—C7119.79 (12)C19—C18—H18B110.4
C10—C9—C8121.18 (14)H18A—C18—H18B108.6
C10—C9—H9A119.4C18—C19—H19A109.5
C8—C9—H9A119.4C18—C19—H19B109.5
C11—C10—C9120.00 (14)H19A—C19—H19B109.5
C11—C10—H10A120.0C18—C19—H19C109.5
C9—C10—H10A120.0H19A—C19—H19C109.5
C10—C11—C12120.05 (14)H19B—C19—H19C109.5
O1—C1—C2—C3−16.1 (2)C12—C13—C14—O230.47 (17)
C14—C1—C2—C3160.58 (12)C8—C13—C14—O2−153.54 (12)
O1—C1—C2—C7162.22 (14)C12—C13—C14—C15−89.82 (15)
C14—C1—C2—C7−21.08 (18)C8—C13—C14—C1586.17 (15)
C7—C2—C3—C42.9 (2)C12—C13—C14—C1154.49 (12)
C1—C2—C3—C4−178.75 (13)C8—C13—C14—C1−29.51 (17)
C2—C3—C4—C5−0.3 (2)O1—C1—C14—O2−22.47 (18)
C3—C4—C5—C6−2.0 (2)C2—C1—C14—O2160.67 (11)
C4—C5—C6—C71.8 (2)O1—C1—C14—C1595.84 (15)
C5—C6—C7—C20.8 (2)C2—C1—C14—C15−81.02 (14)
C5—C6—C7—C8−176.09 (13)O1—C1—C14—C13−146.70 (13)
C3—C2—C7—C6−3.1 (2)C2—C1—C14—C1336.44 (16)
C1—C2—C7—C6178.58 (12)O2—C14—C15—C16−131.81 (15)
C3—C2—C7—C8173.88 (12)C13—C14—C15—C16−10.54 (19)
C1—C2—C7—C8−4.43 (19)C1—C14—C15—C16109.08 (16)
C6—C7—C8—C911.4 (2)O2—C14—C15—S150.22 (14)
C2—C7—C8—C9−165.45 (13)C13—C14—C15—S1171.49 (9)
C6—C7—C8—C13−170.55 (13)C1—C14—C15—S1−68.89 (13)
C2—C7—C8—C1312.60 (19)C17—S1—C15—C16−0.46 (10)
C13—C8—C9—C100.3 (2)C17—S1—C15—C14177.89 (11)
C7—C8—C9—C10178.36 (13)C14—C15—C16—N1−178.05 (12)
C8—C9—C10—C11−0.6 (2)S1—C15—C16—N10.10 (15)
C9—C10—C11—C120.7 (2)C17—N1—C16—C150.48 (17)
C10—C11—C12—C13−0.5 (2)C16—N1—C17—O3179.32 (12)
C11—C12—C13—C80.2 (2)C16—N1—C17—S1−0.87 (14)
C11—C12—C13—C14176.17 (13)C18—O3—C17—N17.77 (19)
C9—C8—C13—C120.0 (2)C18—O3—C17—S1−172.05 (9)
C7—C8—C13—C12−178.18 (12)C15—S1—C17—N10.80 (11)
C9—C8—C13—C14−175.96 (13)C15—S1—C17—O3−179.37 (11)
C7—C8—C13—C145.91 (19)C17—O3—C18—C19171.99 (12)
Cg1 is the centroid of the thiazole ring.
D—H···AD—HH···AD···AD—H···A
O2—H1O2···N1i0.87 (3)2.08 (3)2.8643 (18)149 (2)
C12—H12A···O3ii0.932.523.4395 (18)170.
C4—H4A···Cg1iii0.932.703.563155
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the thia­zole ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O2—H1O2⋯N1i0.87 (3)2.08 (3)2.8643 (18)149 (2)
C12—H12A⋯O3ii0.932.523.4395 (18)170
C4—H4ACg1iii0.932.703.563155

Symmetry codes: (i) ; (ii) ; (iii) .

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