Literature DB >> 21588493

Poly[[μ(3)-chlorido-bis(μ(2)-thio-urea-κS)disilver(I)] nitrate].

Saeed Ahmad, Aisha Saddiqa, Muhammad Monim-Ul-Mehboob, Muhammad Altaf, Helen Stoeckli-Evans.   

Abstract

The mol-ecular structure of the title polymeric complex, {[Ag(2)Cl(CH(4)N(2)S)(2)]NO(3)}(n), consists of a binuclear cationic complex and a nitrate counter-ion. The cationic complex contains two bridging thio-urea (Tu) ligands and a triply bridging μ(3)-Cl anion. The latter is probably released from 2-amino-ethane-thiol hydro-chloride during the synthesis. The coordination environment around the two Ag(I) atoms is different; one is trigonal planar, being coordinated by two thio-urea ligands through the S atoms and to one Cl(-) ion, while in the other the Ag(I) atom is tetra-hedrally coordinated by two thio-urea ligands through the S atoms and to two Cl(-) ions. These units aggregate through the Cl(-) anion and the Tu S atoms, forming a chain propagating in [100]. In the crystal structure, the polymeric chains are linked via N-H⋯O and N-H⋯Cl hydrogen bonds, forming a double layer two-dimensional network propagating in (011).

Entities:  

Year:  2010        PMID: 21588493      PMCID: PMC3008121          DOI: 10.1107/S1600536810030953

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For silver(I) complexes with sulfur-containing ligands with applications in medicine and analytical chemistry, see: Raper (1996 ▶); Akrivos (2001 ▶). For silver(I) complexes containing thio­nes, see: Stocker et al. (2000 ▶); Pakawatchai et al. (1996 ▶); Casas et al. (1996 ▶); Aslandis et al. (2005 ▶); Ashraf et al. (2004 ▶); Isab et al. (2002 ▶). For silver(I) complexes containing thiol­ates, see: Nomiya et al. (2000 ▶); Zachariadis et al. (2003 ▶); Tsyba et al. (2003 ▶). For argentophilic inter­actions, see: Nomiya et al. (2000 ▶); Zachariadis et al. (2003 ▶); Tsyba et al. (2003 ▶). For the structures of some silver(I) complexes of thio­urea, see: Udupa et al. (1976 ▶); Hanif et al. (2007 ▶).

Experimental

Crystal data

[Ag2Cl(CH4N2S)2]NO3 M = 465.44 Triclinic, a = 6.3981 (8) Å b = 7.7060 (9) Å c = 11.8478 (14) Å α = 83.041 (14)° β = 82.868 (14)° γ = 77.312 (14)° V = 562.80 (12) Å3 Z = 2 Mo Kα radiation μ = 4.08 mm−1 T = 173 K 0.34 × 0.23 × 0.12 mm

Data collection

Stoe IPDS diffractometer Absorption correction: multi-scan (MULscanABS in PLATON; Spek, 2009 ▶) T min = 0.771, T max = 1.353 4473 measured reflections 2055 independent reflections 1682 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.114 S = 0.98 2055 reflections 136 parameters H-atom parameters constrained Δρmax = 1.49 e Å−3 Δρmin = −1.27 e Å−3 Data collection: EXPOSE (Stoe & Cie, 2004 ▶); cell refinement: CELL (Stoe & Cie, 2004 ▶); data reduction: INTEGRATE (Stoe & Cie, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: PLATON and SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810030953/bt5309sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810030953/bt5309Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ag2Cl(CH4N2S)2]NO3Z = 2
Mr = 465.44F(000) = 444
Triclinic, P1Dx = 2.747 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.3981 (8) ÅCell parameters from 5310 reflections
b = 7.7060 (9) Åθ = 2.7–26.0°
c = 11.8478 (14) ŵ = 4.08 mm1
α = 83.041 (14)°T = 173 K
β = 82.868 (14)°Plate, colourless
γ = 77.312 (14)°0.34 × 0.23 × 0.12 mm
V = 562.80 (12) Å3
Stoe IPDS diffractometer2055 independent reflections
Radiation source: fine-focus sealed tube1682 reflections with I > 2σ(I)
graphiteRint = 0.056
φ scansθmax = 26.0°, θmin = 2.7°
Absorption correction: multi-scan (MULscanABS in PLATON; Spek, 2009)h = −7→7
Tmin = 0.771, Tmax = 1.353k = −9→8
4473 measured reflectionsl = −14→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H-atom parameters constrained
S = 0.98w = 1/[σ2(Fo2) + (0.0795P)2] where P = (Fo2 + 2Fc2)/3
2055 reflections(Δ/σ)max < 0.001
136 parametersΔρmax = 1.49 e Å3
0 restraintsΔρmin = −1.27 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. The NH2H-atoms were included in calculated positions and treated as riding atoms: N—H 0.88 Å with Uiso(H) = 1.2Ueq(parent N-atom).
xyzUiso*/Ueq
Ag10.48799 (7)0.87109 (6)0.15613 (4)0.0303 (2)
Ag21.07497 (7)1.16730 (7)0.06513 (4)0.0327 (2)
Cl10.6808 (2)1.16001 (19)0.05756 (13)0.0245 (4)
S10.7764 (2)0.63258 (18)0.08944 (12)0.0197 (4)
S20.2032 (2)1.07487 (18)0.25782 (13)0.0201 (4)
N11.1617 (8)0.5710 (7)0.1682 (5)0.0264 (16)
N20.8858 (7)0.5149 (7)0.2959 (5)0.0271 (16)
N30.0979 (8)0.8245 (7)0.4138 (5)0.0319 (16)
N4−0.1790 (8)0.9882 (7)0.3218 (5)0.0276 (16)
C10.9560 (8)0.5703 (7)0.1930 (5)0.0179 (14)
C20.0266 (8)0.9512 (7)0.3359 (5)0.0183 (17)
O10.1853 (6)0.3896 (6)0.4594 (4)0.0303 (15)
O20.4735 (7)0.2157 (7)0.5106 (5)0.0440 (16)
O30.4800 (8)0.3913 (8)0.3521 (5)0.0481 (18)
N50.3826 (7)0.3331 (7)0.4412 (5)0.0268 (16)
H1A1.251100.534100.221100.0320*
H1B1.210100.608400.098800.0320*
H2A0.976000.478100.348400.0330*
H2B0.748200.514100.313100.0330*
H3A0.008300.765300.455900.0380*
H3B0.235600.798300.424200.0380*
H4A−0.266800.927900.364600.0330*
H4B−0.229301.073300.269600.0330*
U11U22U33U12U13U23
Ag10.0177 (3)0.0356 (3)0.0341 (3)−0.0027 (2)0.0032 (2)−0.0001 (2)
Ag20.0266 (3)0.0465 (3)0.0235 (3)−0.0128 (2)−0.0058 (2)0.0155 (2)
Cl10.0214 (6)0.0313 (7)0.0219 (8)−0.0123 (5)−0.0056 (5)0.0089 (6)
S10.0155 (6)0.0263 (7)0.0163 (8)−0.0040 (5)−0.0036 (5)0.0038 (6)
S20.0160 (6)0.0234 (7)0.0198 (8)−0.0062 (5)−0.0013 (5)0.0057 (6)
N10.024 (2)0.036 (3)0.019 (3)−0.010 (2)−0.0043 (19)0.007 (2)
N20.014 (2)0.043 (3)0.022 (3)−0.007 (2)−0.0018 (19)0.008 (2)
N30.019 (2)0.042 (3)0.029 (3)−0.005 (2)−0.005 (2)0.019 (3)
N40.018 (2)0.041 (3)0.022 (3)−0.011 (2)−0.0029 (19)0.014 (2)
C10.018 (2)0.016 (2)0.019 (3)−0.0056 (19)−0.002 (2)0.005 (2)
C20.019 (3)0.022 (3)0.012 (3)−0.001 (2)−0.001 (2)−0.001 (2)
O10.0158 (18)0.044 (3)0.024 (3)0.0012 (17)−0.0020 (16)0.011 (2)
O20.022 (2)0.056 (3)0.047 (3)−0.001 (2)−0.013 (2)0.019 (3)
O30.028 (2)0.071 (4)0.041 (3)−0.020 (2)0.010 (2)0.016 (3)
N50.016 (2)0.035 (3)0.028 (3)−0.008 (2)−0.002 (2)0.007 (2)
Ag1—Cl12.8393 (15)N1—C11.314 (8)
Ag1—S12.4305 (15)N2—C11.301 (8)
Ag1—S22.4278 (15)N3—C21.305 (8)
Ag1—Cl1i2.9280 (16)N4—C21.311 (8)
Ag2—Cl12.5477 (14)N1—H1A0.8800
Ag2—S2ii2.4913 (16)N1—H1B0.8800
Ag2—S1iii2.4827 (15)N2—H2B0.8800
S1—C11.738 (6)N2—H2A0.8800
S2—C21.744 (6)N3—H3A0.8800
O1—N51.242 (6)N3—H3B0.8800
O2—N51.241 (8)N4—H4A0.8800
O3—N51.244 (8)N4—H4B0.8800
Cl1—Ag1—S196.91 (5)C1—N1—H1A120.00
Cl1—Ag1—S290.60 (5)C1—N2—H2A120.00
Cl1—Ag1—Cl1i92.64 (5)H2A—N2—H2B120.00
S1—Ag1—S2169.00 (5)C1—N2—H2B120.00
Cl1i—Ag1—S182.74 (5)C2—N3—H3A120.00
Cl1i—Ag1—S2105.01 (5)H3A—N3—H3B120.00
Cl1—Ag2—S2ii114.00 (5)C2—N3—H3B120.00
Cl1—Ag2—S1iii114.55 (5)C2—N4—H4B120.00
S1iii—Ag2—S2ii126.77 (5)H4A—N4—H4B120.00
Ag1—Cl1—Ag2123.99 (6)C2—N4—H4A120.00
Ag1—Cl1—Ag1i87.36 (4)O2—N5—O3122.5 (5)
Ag1i—Cl1—Ag2121.83 (6)O1—N5—O2118.6 (5)
Ag1—S1—C1108.15 (19)O1—N5—O3118.8 (5)
Ag1—S1—Ag2iii93.38 (5)S1—C1—N1121.4 (5)
Ag2iii—S1—C1108.74 (19)S1—C1—N2119.0 (4)
Ag1—S2—C2108.27 (19)N1—C1—N2119.6 (5)
Ag1—S2—Ag2iv83.91 (5)S2—C2—N3119.6 (4)
Ag2iv—S2—C2107.4 (2)S2—C2—N4121.3 (4)
C1—N1—H1B120.00N3—C2—N4119.0 (5)
H1A—N1—H1B120.00
S1—Ag1—Cl1—Ag2−44.29 (8)S2—Ag1—Cl1i—Ag1i91.33 (5)
S1—Ag1—Cl1—Ag1i83.00 (5)S2—Ag1—Cl1i—Ag2i−37.73 (8)
S2—Ag1—Cl1—Ag2127.66 (7)S2ii—Ag2—Cl1—Ag1−46.44 (8)
S2—Ag1—Cl1—Ag1i−105.06 (5)S2ii—Ag2—Cl1—Ag1i−157.13 (6)
Cl1i—Ag1—Cl1—Ag2−127.29 (7)S1iii—Ag2—Cl1—Ag1156.10 (6)
Cl1i—Ag1—Cl1—Ag1i−0.02 (9)S1iii—Ag2—Cl1—Ag1i45.41 (8)
Cl1—Ag1—S1—C190.6 (2)Cl1—Ag2—S2ii—Ag1ii127.70 (5)
Cl1—Ag1—S1—Ag2iii−20.40 (5)Cl1—Ag2—S2ii—C2ii20.4 (2)
Cl1i—Ag1—S1—C1−177.6 (2)Cl1—Ag2—S1iii—Ag1iii−123.22 (5)
Cl1i—Ag1—S1—Ag2iii71.40 (5)Cl1—Ag2—S1iii—C1iii−12.8 (2)
Cl1—Ag1—S2—C2179.2 (2)Ag1—S1—C1—N1−124.7 (4)
Cl1—Ag1—S2—Ag2iv72.83 (5)Ag1—S1—C1—N258.3 (5)
Cl1i—Ag1—S2—C286.3 (2)Ag2iii—S1—C1—N1−24.5 (5)
Cl1i—Ag1—S2—Ag2iv−20.06 (5)Ag2iii—S1—C1—N2158.4 (4)
Cl1—Ag1—Cl1i—Ag1i0.02 (10)Ag1—S2—C2—N360.2 (5)
Cl1—Ag1—Cl1i—Ag2i−129.06 (7)Ag1—S2—C2—N4−123.1 (5)
S1—Ag1—Cl1i—Ag1i−96.64 (5)Ag2iv—S2—C2—N3149.4 (4)
S1—Ag1—Cl1i—Ag2i134.30 (7)Ag2iv—S2—C2—N4−33.8 (5)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O3ii0.882.283.153 (8)170
N2—H2A···O1ii0.881.952.831 (7)177
N2—H2B···O30.882.112.932 (7)155
N3—H3A···O1v0.882.002.881 (7)174
N3—H3B···O2vi0.882.082.930 (7)163
N4—H4A···O2v0.882.223.095 (8)173
N1—H1B···Cl1iii0.882.563.372 (6)155
N4—H4B···Cl1iv0.882.623.396 (6)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O3i0.882.283.153 (8)170
N2—H2A⋯O1i0.881.952.831 (7)177
N2—H2B⋯O30.882.112.932 (7)155
N3—H3A⋯O1ii0.882.002.881 (7)174
N3—H3B⋯O2iii0.882.082.930 (7)163
N4—H4A⋯O2ii0.882.223.095 (8)173
N1—H1B⋯Cl1iv0.882.563.372 (6)155
N4—H4B⋯Cl1v0.882.623.396 (6)147

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  4 in total

1.  Crystal structures of a family of silver cyanide complexes of thiourea and substituted thioureas.

Authors:  F B Stocker; D Britton; V G Young
Journal:  Inorg Chem       Date:  2000 Aug, 7       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and structure of a water-soluble hexanuclear silver(I) nicotinate cluster comprised of a "cyclohexane-chair"-type of framework, showing effective antibacterial and antifungal activities: use of "sparse matrix" techniques for growing crystals of water-soluble inorganic complexes.

Authors:  Irina Tsyba; Becky Bun-Kit Mui; Robert Bau; Ryusuke Noguchi; Kenji Nomiya
Journal:  Inorg Chem       Date:  2003-12-01       Impact factor: 5.165

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total

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