Literature DB >> 21588489

Bis(μ-pyridine-2,4-dicarboxyl-ato)-κN,O:O;κO:N,O-bis-[triaqua-magnesium(II)].

Qing-Fu Zhang1, Dan-Dan Han, Jian-Dong Pang, Ning-Ning Meng.   

Abstract

In the title centrosymmetric Mg(II) complex, [n class="Chemical">Mg(2)(C(7)H(3)NO(4))(2)(H(2)O)(6)], each Mg cation is N,O-chelated by a pyridine-2,4-dicarboxyl-ate dianion and is coordinated by three water mol-ecules. A carboxyl-ate O atom from the neighboring pyridine-2,4-dicarboxyl-ate dianion bridges the Mg cation to complete the MgNO(5) distorted octa-hedral coordination geometry. The dinuclear complex mol-ecules are linked by inter-molecular O-H⋯O hydrogen bonding, forming a three-dimensional supra-molecular structure.

Entities:  

Year:  2010        PMID: 21588489      PMCID: PMC3008092          DOI: 10.1107/S1600536810030722

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of Mg complexes, see: Davies et al. (2007 ▶); Dinca & Long (2005 ▶).

Experimental

Crystal data

[Mg2(C7H3NO4)2(H2O)6] M = 486.92 Orthorhombic, a = 7.9221 (8) Å b = 12.0951 (12) Å c = 20.2989 (18) Å V = 1945.0 (3) Å3 Z = 4 Mo Kα radiation μ = 0.21 mm−1 T = 293 K 0.25 × 0.18 × 0.15 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.951, T max = 0.970 8884 measured reflections 1719 independent reflections 1289 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.100 S = 1.06 1719 reflections 145 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.30 e Å−3 Data collection: SMART (Siemens, 1996 ▶); cell refinement: SAINT (Siemens, 1996 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810030722/xu5007sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810030722/xu5007Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mg2(C7H3NO4)2(H2O)6]F(000) = 1008
Mr = 486.92Dx = 1.663 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 2705 reflections
a = 7.9221 (8) Åθ = 3.2–26.8°
b = 12.0951 (12) ŵ = 0.21 mm1
c = 20.2989 (18) ÅT = 293 K
V = 1945.0 (3) Å3Block, colorless
Z = 40.25 × 0.18 × 0.15 mm
Bruker SMART CCD area-detector diffractometer1719 independent reflections
Radiation source: fine-focus sealed tube1289 reflections with I > 2σ(I)
graphiteRint = 0.042
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −5→9
Tmin = 0.951, Tmax = 0.970k = −14→14
8884 measured reflectionsl = −24→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.100H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0376P)2 + 1.7679P] where P = (Fo2 + 2Fc2)/3
1719 reflections(Δ/σ)max < 0.001
145 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mg10.07954 (11)0.60169 (7)0.04323 (3)0.0240 (2)
O1−0.0075 (2)0.43818 (14)0.05141 (7)0.0272 (4)
O2−0.0923 (4)0.30663 (19)0.12021 (10)0.0760 (9)
O3−0.0102 (4)0.3649 (2)0.35781 (9)0.0875 (11)
H6A0.11780.80680.07650.105*
H5B−0.18920.72460.08480.105*
H5A−0.23770.61930.08260.105*
H7A0.35030.5401−0.01940.105*
H7B0.40540.56000.04570.105*
H6B0.21740.80160.02110.105*
O40.1026 (2)0.51899 (15)0.39638 (8)0.0364 (5)
O5−0.1604 (2)0.66298 (14)0.06670 (8)0.0323 (5)
O60.1539 (3)0.76106 (16)0.04659 (9)0.0491 (6)
O70.3209 (2)0.56088 (17)0.01937 (8)0.0430 (5)
N10.1126 (3)0.56101 (17)0.14911 (9)0.0257 (5)
C1−0.0232 (4)0.3941 (2)0.10852 (11)0.0325 (6)
C20.0461 (3)0.4620 (2)0.16485 (11)0.0261 (6)
C30.0314 (3)0.4258 (2)0.22895 (11)0.0302 (6)
H3−0.01350.35640.23780.036*
C40.0838 (3)0.4934 (2)0.28011 (11)0.0281 (6)
C50.0576 (4)0.4556 (2)0.35037 (12)0.0361 (7)
C60.1530 (4)0.5952 (2)0.26430 (11)0.0318 (6)
H60.19020.64260.29730.038*
C70.1660 (4)0.6255 (2)0.19836 (11)0.0325 (6)
H70.21390.69350.18810.039*
U11U22U33U12U13U23
Mg10.0328 (5)0.0234 (5)0.0157 (4)−0.0004 (4)0.0015 (3)−0.0008 (3)
O10.0415 (11)0.0250 (10)0.0151 (8)0.0001 (8)−0.0028 (8)0.0000 (7)
O20.151 (3)0.0485 (15)0.0289 (11)−0.0543 (16)−0.0205 (13)0.0080 (10)
O30.176 (3)0.0627 (17)0.0241 (11)−0.0682 (19)0.0088 (14)0.0028 (10)
O40.0497 (12)0.0419 (12)0.0176 (8)−0.0064 (9)−0.0043 (8)−0.0016 (8)
O50.0379 (11)0.0271 (10)0.0320 (9)0.0057 (8)0.0049 (8)−0.0031 (8)
O60.0683 (15)0.0308 (11)0.0482 (12)−0.0158 (10)0.0282 (11)−0.0089 (9)
O70.0339 (11)0.0693 (15)0.0260 (9)0.0104 (10)−0.0014 (8)−0.0103 (9)
N10.0348 (13)0.0239 (12)0.0185 (10)−0.0021 (9)−0.0003 (9)0.0002 (8)
C10.0538 (18)0.0229 (14)0.0208 (13)−0.0060 (13)−0.0040 (12)−0.0003 (11)
C20.0327 (15)0.0238 (14)0.0220 (12)−0.0006 (11)−0.0008 (11)0.0010 (10)
C30.0445 (17)0.0256 (14)0.0205 (12)−0.0074 (12)−0.0023 (12)0.0028 (10)
C40.0349 (15)0.0301 (15)0.0194 (12)−0.0011 (12)−0.0010 (11)0.0007 (10)
C50.0526 (19)0.0362 (17)0.0193 (13)−0.0074 (14)−0.0014 (12)0.0027 (12)
C60.0449 (16)0.0308 (15)0.0196 (12)−0.0068 (13)−0.0052 (12)−0.0026 (10)
C70.0466 (17)0.0275 (15)0.0236 (13)−0.0102 (13)−0.0025 (12)0.0009 (11)
Mg1—N12.2202 (19)O7—H7A0.8581
Mg1—O12.1011 (19)O7—H7B0.8563
Mg1—O1i2.0613 (16)N1—C71.336 (3)
Mg1—O52.0953 (19)N1—C21.347 (3)
Mg1—O62.017 (2)C1—C21.511 (3)
Mg1—O72.033 (2)C2—C31.378 (3)
O1—C11.282 (3)C3—C41.385 (3)
O2—C11.215 (3)C3—H30.9300
O3—C51.231 (3)C4—C61.385 (4)
O4—C51.260 (3)C4—C51.512 (3)
O5—H5B0.8616C6—C71.392 (3)
O5—H5A0.8701C6—H60.9300
O6—H6A0.8688C7—H70.9300
O6—H6B0.8725
O6—Mg1—O788.02 (9)H6A—O6—H6B104.2
O6—Mg1—O1i109.63 (8)Mg1—O7—H7A123.0
O7—Mg1—O1i88.93 (7)Mg1—O7—H7B126.1
O6—Mg1—O585.36 (8)H7A—O7—H7B110.8
O7—Mg1—O5173.33 (9)C7—N1—C2117.7 (2)
O1i—Mg1—O592.50 (7)C7—N1—Mg1129.22 (17)
O6—Mg1—O1173.16 (8)C2—N1—Mg1112.37 (15)
O7—Mg1—O195.68 (8)O2—C1—O1125.6 (2)
O1i—Mg1—O176.26 (7)O2—C1—C2119.3 (2)
O5—Mg1—O190.98 (8)O1—C1—C2115.0 (2)
O6—Mg1—N198.32 (8)N1—C2—C3122.7 (2)
O7—Mg1—N193.77 (8)N1—C2—C1116.5 (2)
O1i—Mg1—N1152.00 (8)C3—C2—C1120.7 (2)
O5—Mg1—N188.02 (8)C2—C3—C4119.7 (2)
O1—Mg1—N175.74 (7)C2—C3—H3120.2
O6—Mg1—Mg1i148.06 (7)C4—C3—H3120.2
O7—Mg1—Mg1i92.97 (6)C6—C4—C3118.0 (2)
O1i—Mg1—Mg1i38.56 (5)C6—C4—C5122.8 (2)
O5—Mg1—Mg1i92.20 (6)C3—C4—C5119.2 (2)
O1—Mg1—Mg1i37.70 (4)O3—C5—O4125.1 (2)
N1—Mg1—Mg1i113.44 (7)O3—C5—C4116.5 (2)
C1—O1—Mg1i135.94 (16)O4—C5—C4118.4 (2)
C1—O1—Mg1119.66 (15)C4—C6—C7119.1 (2)
Mg1i—O1—Mg1103.74 (7)C4—C6—H6120.5
Mg1—O5—H5B130.0C7—C6—H6120.5
Mg1—O5—H5A120.5N1—C7—C6122.9 (2)
H5B—O5—H5A100.5N1—C7—H7118.6
Mg1—O6—H6A122.4C6—C7—H7118.6
Mg1—O6—H6B133.3
D—H···AD—HH···AD···AD—H···A
O5—H5A···O4ii0.871.802.668 (3)172.
O5—H5B···O2iii0.862.122.834 (3)140.
O6—H6A···O3iv0.871.732.576 (3)163.
O6—H6B···O5v0.872.072.880 (2)154.
O7—H7A···O4vi0.861.892.745 (2)174.
O7—H7B···O4vii0.862.022.857 (3)166.
Table 1

Selected bond lengths (Å)

Mg1—N12.2202 (19)
Mg1—O12.1011 (19)
Mg1—O1i2.0613 (16)
Mg1—O52.0953 (19)
Mg1—O62.017 (2)
Mg1—O72.033 (2)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O5—H5A⋯O4ii0.871.802.668 (3)172
O5—H5B⋯O2iii0.862.122.834 (3)140
O6—H6A⋯O3iv0.871.732.576 (3)163
O6—H6B⋯O5v0.872.072.880 (2)154
O7—H7A⋯O4vi0.861.892.745 (2)174
O7—H7B⋯O4vii0.862.022.857 (3)166

Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Strong H(2) binding and selective gas adsorption within the microporous coordination solid Mg(3)(O(2)C-C(10)H(6)-CO(2))(3).

Authors:  Mircea Dinca; Jeffrey R Long
Journal:  J Am Chem Soc       Date:  2005-07-06       Impact factor: 15.419

3.  Framework materials assembled from magnesium carboxylate building units.

Authors:  Robert P Davies; Robert J Less; Paul D Lickiss; Andrew J P White
Journal:  Dalton Trans       Date:  2007-05-18       Impact factor: 4.390

  3 in total

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