Literature DB >> 21588411

Hydrogen-bonding patterns in pyrimethaminium pyridine-3-sulfonate.

Jeyaraman Selvaraj Nirmalram1, Packianathan Thomas Muthiah.   

Abstract

IN THE ASYMMETRIC UNIT OF THE TITLE SALT [SYSTEMATIC NAME: 2,4-diamino-5-(4-chloro-phen-yl)-6-ethyl-pyrimidin-1-ium pyri-dine-3-sulfonate], C(12)H(14)N(4)Cl(+)·C(5)H(4)NSO(3) (-), there are two independent pyrimethaminium cations and two 3-pyridine sulfonate anions. Each sulfonate group inter-acts with the corresponding protonated pyrimidine ring through two N-H⋯O hydrogen bonds, forming a cyclic hydrogen-bonded bimolecular R(2) (2)(8) motif. Even though the primary mode of association is the same, the next higher level of supra-molecular architectures are different due to different hydrogen-bonded networks. In one of the independent molecules in the asymmetric unit, the pyrimethamine cation is paired centrosymmetrically through N-H⋯N hydrogen bonds, generating an R(2) (2)(8) ring motif. In the other molecule, the pyrimethamine cation does not form any base pairs; instead it forms hydrogen bonds with the 3-pyridine sulfonate anion. The structure is further stabilized by C-H⋯O, C-H⋯N and π-π stacking [centroid-centroid distance = 3.9465 (13) Å] inter-actions.

Entities:  

Year:  2010        PMID: 21588411      PMCID: PMC3007288          DOI: 10.1107/S1600536810029119

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to crystal engineering and supra­molecular chemistry, see: Desiraju (1989 ▶); Lehn (1995 ▶). For structures involving pyrimethamine carboxyl­ates, see: Sethuraman et al. (2003 ▶); Stanley et al. (2002 ▶). For structures involving sulfonates, see: Hemamalini et al. (2005 ▶); Balasubramani et al. (2007 ▶); Baskar et al. (2003 ▶). For a survey on hydrogen-bonding patterns involving sulfonate salts, see: Haynes et al. (2004 ▶). For the crystal structures of pyrimethamine and metoprine, see: Sethuraman & Thomas Muthiah (2002 ▶); De et al. (1989 ▶). For modeling studies on DHFRPMN complexes, see: Sansom et al. (1989 ▶). For hydrogen-bond motifs, see: Etter (1990 ▶); Bernstein et al. (1995 ▶).

Experimental

Crystal data

C12H14ClN4C5H4NO3S M = 407.88 Triclinic, a = 10.4525 (17) Å b = 12.200 (2) Å c = 16.539 (3) Å α = 81.130 (9)° β = 83.580 (9)° γ = 68.649 (8)° V = 1937.3 (6) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 296 K 0.22 × 0.17 × 0.15 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.930, T max = 0.952 38297 measured reflections 11491 independent reflections 7509 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.142 S = 1.04 11491 reflections 489 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXL97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: PLATON. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810029119/is2577sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810029119/is2577Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H14ClN4+·C5H4NO3SZ = 4
Mr = 407.88F(000) = 848
Triclinic, P1Dx = 1.398 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 10.4525 (17) ÅCell parameters from 11491 reflections
b = 12.200 (2) Åθ = 1.8–31.3°
c = 16.539 (3) ŵ = 0.33 mm1
α = 81.130 (9)°T = 296 K
β = 83.580 (9)°Prism, colourless
γ = 68.649 (8)°0.22 × 0.17 × 0.15 mm
V = 1937.3 (6) Å3
Bruker SMART APEXII CCD area-detector diffractometer7509 reflections with I > 2σ(I)
φ and ω scansRint = 0.038
Absorption correction: multi-scan (SADABS; Bruker, 2008)θmax = 31.3°, θmin = 1.8°
Tmin = 0.930, Tmax = 0.952h = −15→15
38297 measured reflectionsk = −17→17
11491 independent reflectionsl = −23→23
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.142H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0646P)2 + 0.3968P] where P = (Fo2 + 2Fc2)/3
11491 reflections(Δ/σ)max < 0.001
489 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.39 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1A0.05343 (7)0.89280 (6)0.09532 (3)0.0782 (3)
N1A0.08451 (14)0.63858 (13)0.58329 (8)0.0410 (4)
N2A0.23893 (15)0.51659 (15)0.67551 (9)0.0482 (5)
N3A0.31757 (14)0.55476 (13)0.54244 (8)0.0412 (4)
N4A0.39218 (16)0.59433 (17)0.41159 (9)0.0579 (5)
C2A0.21517 (16)0.56952 (15)0.60000 (10)0.0381 (5)
C4A0.28738 (17)0.61007 (16)0.46654 (10)0.0404 (5)
C5A0.14942 (16)0.68001 (15)0.44467 (10)0.0381 (5)
C6A0.04881 (16)0.69257 (15)0.50596 (10)0.0384 (5)
C7A−0.10156 (18)0.75762 (18)0.49834 (12)0.0497 (6)
C8A−0.1822 (2)0.6740 (2)0.51015 (15)0.0714 (9)
C9A0.12152 (17)0.73574 (15)0.35859 (10)0.0394 (5)
C10A0.0526 (2)0.69537 (19)0.31033 (12)0.0566 (7)
C11A0.0286 (3)0.7442 (2)0.22982 (12)0.0626 (8)
C12A0.0762 (2)0.83365 (18)0.19790 (11)0.0491 (6)
C13A0.1449 (2)0.87560 (19)0.24377 (13)0.0581 (7)
C14A0.1670 (2)0.82680 (18)0.32428 (12)0.0529 (6)
Cl1B0.75619 (13)0.10989 (8)0.46283 (4)0.1200 (4)
N1B0.58495 (16)0.29629 (14)−0.01927 (9)0.0464 (5)
N2B0.63275 (18)0.41465 (15)−0.13246 (9)0.0541 (6)
N3B0.69002 (16)0.43241 (14)−0.00694 (9)0.0466 (5)
N4B0.7508 (2)0.44828 (16)0.11694 (10)0.0606 (6)
C2B0.63649 (18)0.38129 (16)−0.05257 (11)0.0432 (5)
C4B0.69761 (19)0.39431 (17)0.07335 (11)0.0451 (6)
C5B0.65112 (19)0.29990 (16)0.11129 (11)0.0445 (6)
C6B0.59195 (19)0.25441 (17)0.06234 (11)0.0453 (6)
C7B0.5359 (2)0.15697 (19)0.08912 (13)0.0589 (7)
C8B0.6301 (3)0.0416 (2)0.06264 (19)0.0887 (11)
C9B0.6738 (2)0.25302 (17)0.19933 (11)0.0473 (6)
C10B0.5798 (2)0.3005 (2)0.26134 (13)0.0619 (7)
C11B0.6061 (3)0.2556 (2)0.34251 (14)0.0724 (9)
C12B0.7232 (3)0.1654 (2)0.36127 (13)0.0703 (9)
C13B0.8169 (4)0.1170 (3)0.30171 (18)0.1075 (11)
C14B0.7925 (3)0.1609 (3)0.22042 (16)0.0897 (10)
S1A0.12542 (4)0.38315 (4)0.22968 (3)0.0454 (1)
O1A0.11857 (15)0.28908 (13)0.29387 (8)0.0619 (5)
O2A0.00169 (14)0.48731 (12)0.23174 (9)0.0592 (5)
O3A0.24940 (15)0.40950 (17)0.22690 (9)0.0706 (6)
N17A0.1545 (2)0.3676 (2)−0.00909 (11)0.0774 (8)
C15A0.12956 (18)0.32917 (17)0.13658 (11)0.0440 (5)
C16A0.1441 (3)0.3989 (2)0.06510 (12)0.0635 (8)
C18A0.1467 (3)0.2638 (3)−0.01309 (15)0.0816 (11)
C19A0.1299 (4)0.1884 (3)0.05338 (17)0.0943 (13)
C20A0.1217 (3)0.2214 (2)0.13088 (15)0.0734 (9)
S1B0.56043 (5)0.75098 (4)0.20892 (2)0.0410 (1)
O1B0.48714 (17)0.81153 (12)0.13616 (8)0.0612 (5)
O2B0.50786 (13)0.65999 (11)0.25133 (7)0.0459 (4)
O3B0.70717 (14)0.70587 (14)0.19638 (9)0.0615 (5)
N17B0.5612 (3)0.9012 (2)0.40602 (16)0.1179 (12)
C15B0.52136 (19)0.85892 (16)0.27683 (11)0.0446 (6)
C16B0.5830 (3)0.8278 (2)0.34985 (16)0.0970 (12)
C18B0.4734 (3)1.0104 (2)0.38887 (16)0.0842 (10)
C19B0.4067 (2)1.0492 (2)0.31906 (15)0.0657 (8)
C20B0.4310 (2)0.97223 (18)0.26126 (12)0.0530 (6)
H2A20.321100.472100.687800.0580*
H1A0.021600.649000.622600.0490*
H2A10.172200.526600.712400.0580*
H4A10.473900.550700.425400.0690*
H4A20.378800.627700.362000.0690*
H7A1−0.116600.803300.444600.0600*
H7A2−0.135500.812700.539000.0600*
H8A1−0.150700.620800.469100.1070*
H8A2−0.278300.719200.505300.1070*
H8A3−0.168400.629200.563600.1070*
H10A0.021600.634000.332400.0680*
H11A−0.018800.717000.198000.0750*
H13A0.176400.936400.221000.0700*
H14A0.213100.855600.355900.0640*
H1B0.546900.26800−0.050200.0560*
H2B20.664700.46880−0.154300.0650*
H10B0.498400.362800.248800.0740*
H2B10.598300.38220−0.162600.0650*
H11B0.542300.288000.384200.0870*
H4B10.778100.504500.093300.0730*
H4B20.757900.427000.168800.0730*
H13B0.897500.054400.315200.1290*
H7B10.521900.148100.148400.0710*
H14B0.857400.127500.179500.1080*
H7B20.447300.178300.066300.0710*
H8B10.647700.050900.004200.1330*
H8B20.58780−0.017200.077800.1330*
H8B30.715200.016800.088900.1330*
H16A0.146900.473200.069200.0760*
H18A0.153100.24020−0.064700.0980*
H19A0.123900.116000.047000.1130*
H20A0.111300.171600.177600.0880*
H16B0.644000.750500.361000.1170*
H18B0.456701.063300.427100.1010*
H19B0.345101.126600.309900.0790*
H20B0.386500.997200.212500.0640*
U11U22U33U12U13U23
Cl1A0.1046 (5)0.0904 (5)0.0411 (3)−0.0428 (4)−0.0217 (3)0.0212 (3)
N1A0.0334 (7)0.0503 (8)0.0321 (7)−0.0093 (6)0.0018 (5)−0.0007 (6)
N2A0.0389 (7)0.0622 (10)0.0339 (7)−0.0116 (7)−0.0026 (6)0.0072 (7)
N3A0.0345 (7)0.0493 (8)0.0329 (7)−0.0096 (6)−0.0016 (5)0.0024 (6)
N4A0.0390 (8)0.0808 (12)0.0349 (8)−0.0068 (8)0.0020 (6)0.0096 (8)
C2A0.0368 (8)0.0421 (9)0.0325 (8)−0.0125 (7)−0.0024 (6)0.0005 (6)
C4A0.0388 (8)0.0454 (9)0.0317 (8)−0.0112 (7)−0.0004 (6)0.0005 (7)
C5A0.0387 (8)0.0395 (9)0.0326 (8)−0.0112 (7)−0.0036 (6)0.0002 (6)
C6A0.0372 (8)0.0390 (9)0.0349 (8)−0.0097 (7)−0.0042 (6)−0.0001 (7)
C7A0.0383 (9)0.0561 (11)0.0417 (9)−0.0043 (8)−0.0042 (7)0.0028 (8)
C8A0.0489 (12)0.0947 (18)0.0718 (15)−0.0291 (12)−0.0169 (10)0.0049 (13)
C9A0.0387 (8)0.0407 (9)0.0328 (8)−0.0088 (7)−0.0036 (6)0.0010 (7)
C10A0.0869 (15)0.0535 (12)0.0402 (10)−0.0398 (11)−0.0100 (9)0.0041 (8)
C11A0.0951 (16)0.0649 (13)0.0407 (10)−0.0424 (13)−0.0203 (10)0.0027 (9)
C12A0.0568 (11)0.0518 (11)0.0333 (9)−0.0157 (9)−0.0069 (7)0.0051 (7)
C13A0.0658 (12)0.0607 (13)0.0526 (11)−0.0347 (11)−0.0144 (9)0.0173 (9)
C14A0.0589 (11)0.0599 (12)0.0469 (10)−0.0312 (10)−0.0171 (8)0.0086 (9)
Cl1B0.2271 (11)0.0951 (6)0.0505 (4)−0.0703 (7)−0.0469 (5)0.0151 (3)
N1B0.0584 (9)0.0509 (9)0.0392 (8)−0.0287 (8)−0.0065 (6)−0.0069 (6)
N2B0.0722 (11)0.0635 (11)0.0385 (8)−0.0382 (9)−0.0082 (7)−0.0021 (7)
N3B0.0583 (9)0.0490 (9)0.0398 (8)−0.0270 (8)−0.0044 (6)−0.0055 (6)
N4B0.0897 (13)0.0692 (11)0.0412 (9)−0.0486 (10)−0.0092 (8)−0.0057 (8)
C2B0.0480 (9)0.0447 (10)0.0385 (9)−0.0180 (8)−0.0028 (7)−0.0058 (7)
C4B0.0516 (10)0.0474 (10)0.0403 (9)−0.0213 (8)−0.0034 (7)−0.0074 (7)
C5B0.0508 (10)0.0473 (10)0.0384 (9)−0.0213 (8)−0.0009 (7)−0.0059 (7)
C6B0.0492 (10)0.0474 (10)0.0419 (9)−0.0207 (8)−0.0008 (7)−0.0057 (7)
C7B0.0745 (14)0.0640 (13)0.0510 (11)−0.0421 (12)−0.0030 (10)−0.0011 (9)
C8B0.112 (2)0.0606 (16)0.099 (2)−0.0420 (16)0.0015 (17)−0.0028 (14)
C9B0.0571 (11)0.0493 (10)0.0397 (9)−0.0239 (9)−0.0046 (8)−0.0036 (8)
C10B0.0640 (13)0.0708 (14)0.0458 (11)−0.0188 (11)−0.0021 (9)−0.0054 (10)
C11B0.0957 (18)0.0831 (17)0.0428 (11)−0.0387 (15)0.0078 (11)−0.0117 (11)
C12B0.114 (2)0.0620 (14)0.0438 (11)−0.0413 (15)−0.0214 (12)0.0047 (10)
C13B0.110 (2)0.106 (2)0.0650 (18)0.0125 (19)−0.0283 (16)0.0023 (16)
C14B0.0827 (18)0.096 (2)0.0533 (14)0.0109 (15)−0.0057 (12)−0.0051 (13)
S1A0.0431 (2)0.0546 (3)0.0372 (2)−0.0179 (2)0.0054 (2)−0.0056 (2)
O1A0.0667 (9)0.0621 (9)0.0411 (7)−0.0117 (7)0.0101 (6)0.0033 (6)
O2A0.0578 (8)0.0481 (8)0.0658 (9)−0.0153 (7)0.0151 (7)−0.0121 (7)
O3A0.0586 (9)0.1133 (14)0.0532 (9)−0.0460 (9)−0.0021 (7)−0.0110 (8)
N17A0.1227 (18)0.0894 (15)0.0420 (10)−0.0650 (14)0.0033 (10)−0.0098 (9)
C15A0.0429 (9)0.0496 (10)0.0410 (9)−0.0199 (8)0.0066 (7)−0.0074 (7)
C16A0.0936 (16)0.0665 (14)0.0436 (11)−0.0458 (13)0.0013 (10)−0.0062 (9)
C18A0.115 (2)0.102 (2)0.0560 (14)−0.0695 (18)0.0113 (13)−0.0265 (13)
C19A0.153 (3)0.091 (2)0.0725 (17)−0.082 (2)0.0202 (17)−0.0313 (15)
C20A0.109 (2)0.0648 (14)0.0579 (13)−0.0491 (14)0.0126 (12)−0.0085 (11)
S1B0.0532 (3)0.0443 (2)0.0281 (2)−0.0208 (2)−0.0059 (2)−0.0003 (2)
O1B0.1014 (11)0.0536 (8)0.0365 (7)−0.0350 (8)−0.0274 (7)0.0067 (6)
O2B0.0559 (7)0.0476 (7)0.0366 (6)−0.0233 (6)−0.0040 (5)0.0009 (5)
O3B0.0549 (8)0.0749 (10)0.0558 (8)−0.0262 (8)0.0110 (6)−0.0135 (7)
N17B0.177 (3)0.0741 (15)0.0801 (16)0.0096 (16)−0.0707 (17)−0.0327 (13)
C15B0.0531 (10)0.0440 (10)0.0369 (9)−0.0155 (8)−0.0119 (7)−0.0030 (7)
C16B0.138 (3)0.0592 (15)0.0711 (16)0.0149 (15)−0.0631 (17)−0.0243 (12)
C18B0.123 (2)0.0581 (15)0.0658 (16)−0.0144 (15)−0.0211 (15)−0.0235 (12)
C19B0.0717 (14)0.0449 (11)0.0721 (15)−0.0082 (10)−0.0084 (11)−0.0109 (10)
C20B0.0568 (11)0.0505 (11)0.0500 (11)−0.0169 (9)−0.0138 (9)0.0014 (9)
Cl1A—C12A1.7445 (19)C13A—C14A1.380 (3)
Cl1B—C12B1.734 (2)C7A—H7A10.9700
S1A—O2A1.4475 (15)C7A—H7A20.9700
S1A—O3A1.4389 (18)C8A—H8A30.9600
S1A—C15A1.7560 (19)C8A—H8A20.9600
S1A—O1A1.4548 (15)C8A—H8A10.9600
S1B—O1B1.4494 (15)C10A—H10A0.9300
S1B—O2B1.4643 (14)C11A—H11A0.9300
S1B—C15B1.7676 (19)C13A—H13A0.9300
S1B—O3B1.4310 (17)C14A—H14A0.9300
N1A—C6A1.370 (2)C4B—C5B1.440 (3)
N1A—C2A1.351 (2)C5B—C9B1.492 (3)
N2A—C2A1.320 (2)C5B—C6B1.359 (3)
N3A—C4A1.343 (2)C6B—C7B1.496 (3)
N3A—C2A1.330 (2)C7B—C8B1.492 (3)
N4A—C4A1.319 (2)C9B—C10B1.377 (3)
N1A—H1A0.8600C9B—C14B1.373 (4)
N2A—H2A10.8600C10B—C11B1.387 (3)
N2A—H2A20.8600C11B—C12B1.343 (4)
N4A—H4A10.8600C12B—C13B1.349 (4)
N4A—H4A20.8600C13B—C14B1.384 (4)
N1B—C6B1.368 (2)C7B—H7B20.9700
N1B—C2B1.354 (3)C7B—H7B10.9700
N2B—C2B1.322 (2)C8B—H8B10.9600
N3B—C4B1.339 (2)C8B—H8B30.9600
N3B—C2B1.329 (3)C8B—H8B20.9600
N4B—C4B1.329 (3)C10B—H10B0.9300
N1B—H1B0.8600C11B—H11B0.9300
N2B—H2B10.8600C13B—H13B0.9300
N2B—H2B20.8600C14B—H14B0.9300
N4B—H4B20.8600C15A—C16A1.374 (3)
N4B—H4B10.8600C15A—C20A1.365 (3)
N17A—C16A1.322 (3)C18A—C19A1.360 (4)
N17A—C18A1.310 (4)C19A—C20A1.386 (4)
N17B—C18B1.323 (3)C16A—H16A0.9300
N17B—C16B1.333 (4)C18A—H18A0.9300
C4A—C5A1.437 (3)C19A—H19A0.9300
C5A—C9A1.491 (2)C20A—H20A0.9300
C5A—C6A1.360 (2)C15B—C16B1.368 (3)
C6A—C7A1.490 (3)C15B—C20B1.365 (3)
C7A—C8A1.522 (3)C18B—C19B1.347 (4)
C9A—C14A1.383 (3)C19B—C20B1.382 (3)
C9A—C10A1.381 (3)C16B—H16B0.9300
C10A—C11A1.383 (3)C18B—H18B0.9300
C11A—C12A1.370 (3)C19B—H19B0.9300
C12A—C13A1.365 (3)C20B—H20B0.9300
Cl1B···C4Ai3.636 (2)N3B···C16Aiv3.128 (3)
Cl1B···C5Ai3.643 (2)N4A···O2B2.909 (2)
Cl1A···H19Aii3.0400N4A···C14A3.210 (3)
S1A···H2A1iii3.0000N4A···N3Ai3.027 (2)
S1A···H1Aiii2.7900N4B···N17Aiv3.033 (3)
S1B···H1Biv3.0400N17A···N4Biv3.033 (3)
S1B···H2A2i2.9100N1A···H8A32.7400
S1B···H2B1iv2.9300N1B···H8B12.8000
O1A···C19Bv3.361 (3)N2A···H4B2i2.7700
O1A···N1Aiii2.764 (2)N3A···H4A1i2.1700
O1A···C7Aiii3.391 (2)N3B···H16Aiv2.4400
O1B···N1Biv2.805 (2)N17A···H4B1iv2.1900
O2A···N2Aiii2.808 (2)N17B···H18Bvii2.8300
O2A···C11A3.242 (3)N17B···H8A2vi2.6900
O2A···C10A3.251 (3)C2A···C11Bi3.588 (3)
O2B···N2Biv3.005 (2)C2B···C4Biv3.581 (3)
O2B···N2Ai2.978 (2)C4A···Cl1Bi3.636 (2)
O2B···N4A2.909 (2)C4B···C2Biv3.581 (3)
O3A···C10B3.299 (3)C5A···Cl1Bi3.643 (2)
O3A···N2Biv3.003 (3)C7A···O1Aiii3.391 (2)
O3B···N2Ai3.091 (2)C7A···C10A3.400 (3)
O3B···C18Aiv3.270 (3)C10A···C7A3.400 (3)
O1A···H1Aiii1.9200C10A···O2A3.251 (3)
O1A···H20A2.5900C10B···O3A3.299 (3)
O1A···H19Bv2.4800C11A···O2A3.242 (3)
O1A···H8A3iii2.8600C11B···C2Ai3.588 (3)
O1A···H7A2iii2.8500C14A···N4A3.210 (3)
O1B···H8B1iv2.8300C16A···N3Biv3.128 (3)
O1B···H20B2.5800C18A···O3Biv3.270 (3)
O1B···H1Biv1.9700C19B···O1Aii3.361 (3)
O1B···H8B2ii2.6800C8A···H1A2.8900
O1B···H2B1iv2.7800C8B···H1B2.9800
O2A···H10A2.7000C9A···H7A12.6400
O2A···H11A2.7100C9A···H4A22.5300
O2A···H2A1iii2.0000C9B···H4B22.5400
O2A···H1Aiii2.7500C9B···H7B12.6400
O2B···H2A2i2.1500C10A···H7A12.8500
O2B···H2B1iv2.1600C10B···H4B22.9900
O2B···H4A22.2200C13A···H13Bviii2.9700
O3A···H10B2.5100C14A···H4A22.6700
O3A···H16A2.8200C16A···H4B1iv2.8600
O3A···H2B2iv2.1500C16B···H8A2vi2.9800
O3B···H2A1i2.9000C20B···H7B1ii2.9700
O3B···H2A2i2.7400H1A···H8A32.4100
O3B···H16B2.8200H1A···H2A12.2500
O3B···H11Avi2.9200H1A···H7A22.4200
O3B···H18Aiv2.6200H1B···H2B12.2800
N1A···O1Aiii2.764 (2)H1B···H7B22.3900
N1B···O1Biv2.805 (2)H1B···H8B12.5300
N2A···O2Aiii2.808 (2)H2A1···H4B2i2.3800
N2A···O3Bi3.091 (2)H2A1···H1A2.2500
N2A···O2Bi2.978 (2)H7A2···H1A2.4200
N2B···O3Aiv3.003 (3)H8A2···H16Bix2.5400
N2B···O2Biv3.005 (2)H2B2···H10Biv2.5700
N3A···N4Ai3.027 (2)H13A···H20B2.5500
O3A—S1A—C15A105.74 (10)C13A—C14A—H14A120.00
O1A—S1A—O3A113.82 (10)C9A—C14A—H14A120.00
O1A—S1A—C15A105.92 (9)N1B—C2B—N2B119.11 (18)
O1A—S1A—O2A111.57 (9)N2B—C2B—N3B119.20 (18)
O2A—S1A—C15A105.93 (9)N1B—C2B—N3B121.68 (16)
O2A—S1A—O3A113.08 (10)N3B—C4B—N4B116.46 (18)
O2B—S1B—O3B111.80 (9)N3B—C4B—C5B122.36 (18)
O1B—S1B—C15B105.88 (9)N4B—C4B—C5B121.18 (17)
O1B—S1B—O3B114.99 (9)C6B—C5B—C9B122.95 (18)
O2B—S1B—C15B105.67 (8)C4B—C5B—C9B120.27 (17)
O3B—S1B—C15B106.12 (10)C4B—C5B—C6B116.73 (17)
O1B—S1B—O2B111.61 (9)C5B—C6B—C7B125.56 (17)
C2A—N1A—C6A122.28 (15)N1B—C6B—C7B115.24 (17)
C2A—N3A—C4A118.01 (16)N1B—C6B—C5B119.17 (18)
C6A—N1A—H1A119.00C6B—C7B—C8B112.0 (2)
C2A—N1A—H1A119.00C5B—C9B—C10B122.07 (19)
H2A2—N2A—H2A1120.00C10B—C9B—C14B118.13 (19)
C2A—N2A—H2A1120.00C5B—C9B—C14B119.80 (19)
C2A—N2A—H2A2120.00C9B—C10B—C11B120.2 (2)
C4A—N4A—H4A2120.00C10B—C11B—C12B120.3 (2)
H4A1—N4A—H4A2120.00C11B—C12B—C13B120.7 (2)
C4A—N4A—H4A1120.00Cl1B—C12B—C11B120.23 (19)
C2B—N1B—C6B121.60 (17)Cl1B—C12B—C13B119.1 (2)
C2B—N3B—C4B118.31 (17)C12B—C13B—C14B119.7 (3)
C6B—N1B—H1B119.00C9B—C14B—C13B120.9 (3)
C2B—N1B—H1B119.00C8B—C7B—H7B2109.00
C2B—N2B—H2B1120.00C8B—C7B—H7B1109.00
H2B2—N2B—H2B1120.00C6B—C7B—H7B2109.00
C2B—N2B—H2B2120.00C6B—C7B—H7B1109.00
H4B1—N4B—H4B2120.00H7B1—C7B—H7B2108.00
C4B—N4B—H4B1120.00H8B1—C8B—H8B3110.00
C4B—N4B—H4B2120.00C7B—C8B—H8B1109.00
C16A—N17A—C18A116.4 (2)C7B—C8B—H8B2109.00
C16B—N17B—C18B116.7 (3)C7B—C8B—H8B3109.00
N1A—C2A—N3A121.39 (15)H8B1—C8B—H8B2109.00
N1A—C2A—N2A118.09 (16)H8B2—C8B—H8B3109.00
N2A—C2A—N3A120.52 (16)C9B—C10B—H10B120.00
N3A—C4A—N4A116.04 (17)C11B—C10B—H10B120.00
N4A—C4A—C5A121.14 (16)C12B—C11B—H11B120.00
N3A—C4A—C5A122.80 (16)C10B—C11B—H11B120.00
C4A—C5A—C9A120.40 (15)C12B—C13B—H13B120.00
C4A—C5A—C6A116.69 (15)C14B—C13B—H13B120.00
C6A—C5A—C9A122.91 (16)C13B—C14B—H14B120.00
N1A—C6A—C7A114.49 (15)C9B—C14B—H14B120.00
C5A—C6A—C7A126.76 (16)C16A—C15A—C20A118.02 (19)
N1A—C6A—C5A118.72 (16)S1A—C15A—C16A117.92 (16)
C6A—C7A—C8A112.06 (17)S1A—C15A—C20A124.05 (16)
C5A—C9A—C10A120.68 (16)N17A—C16A—C15A124.5 (2)
C10A—C9A—C14A118.25 (17)N17A—C18A—C19A124.2 (3)
C5A—C9A—C14A121.05 (17)C18A—C19A—C20A118.8 (3)
C9A—C10A—C11A121.5 (2)C15A—C20A—C19A118.1 (2)
C10A—C11A—C12A118.5 (2)N17A—C16A—H16A118.00
Cl1A—C12A—C11A119.49 (17)C15A—C16A—H16A118.00
Cl1A—C12A—C13A118.89 (16)N17A—C18A—H18A118.00
C11A—C12A—C13A121.59 (19)C19A—C18A—H18A118.00
C12A—C13A—C14A119.3 (2)C18A—C19A—H19A121.00
C9A—C14A—C13A120.91 (19)C20A—C19A—H19A121.00
C8A—C7A—H7A2109.00C15A—C20A—H20A121.00
C6A—C7A—H7A2109.00C19A—C20A—H20A121.00
C8A—C7A—H7A1109.00S1B—C15B—C16B118.77 (16)
C6A—C7A—H7A1109.00S1B—C15B—C20B123.70 (15)
H7A1—C7A—H7A2108.00C16B—C15B—C20B117.52 (18)
C7A—C8A—H8A3109.00N17B—C16B—C15B124.2 (2)
H8A1—C8A—H8A3109.00N17B—C18B—C19B123.5 (2)
C7A—C8A—H8A2109.00C18B—C19B—C20B119.0 (2)
H8A1—C8A—H8A2109.00C15B—C20B—C19B118.99 (19)
C7A—C8A—H8A1109.00N17B—C16B—H16B118.00
H8A2—C8A—H8A3109.00C15B—C16B—H16B118.00
C9A—C10A—H10A119.00N17B—C18B—H18B118.00
C11A—C10A—H10A119.00C19B—C18B—H18B118.00
C10A—C11A—H11A121.00C18B—C19B—H19B121.00
C12A—C11A—H11A121.00C20B—C19B—H19B120.00
C12A—C13A—H13A120.00C15B—C20B—H20B120.00
C14A—C13A—H13A120.00C19B—C20B—H20B121.00
O2A—S1A—C15A—C16A65.0 (2)C5A—C9A—C10A—C11A−178.5 (2)
O1A—S1A—C15A—C16A−176.4 (2)C10A—C9A—C14A—C13A−0.4 (3)
O1A—S1A—C15A—C20A2.4 (2)C14A—C9A—C10A—C11A−0.2 (3)
O3A—S1A—C15A—C20A123.5 (2)C5A—C9A—C14A—C13A177.88 (19)
O2A—S1A—C15A—C20A−116.2 (2)C9A—C10A—C11A—C12A0.7 (4)
O3A—S1A—C15A—C16A−55.3 (2)C10A—C11A—C12A—C13A−0.6 (4)
O1B—S1B—C15B—C16B−176.6 (2)C10A—C11A—C12A—Cl1A177.44 (18)
O2B—S1B—C15B—C16B64.8 (2)Cl1A—C12A—C13A—C14A−178.06 (17)
O2B—S1B—C15B—C20B−114.20 (19)C11A—C12A—C13A—C14A0.0 (3)
O1B—S1B—C15B—C20B4.3 (2)C12A—C13A—C14A—C9A0.5 (3)
O3B—S1B—C15B—C20B126.96 (19)N3B—C4B—C5B—C6B−3.3 (3)
O3B—S1B—C15B—C16B−54.0 (2)N4B—C4B—C5B—C9B−5.7 (3)
C6A—N1A—C2A—N2A−176.88 (16)N4B—C4B—C5B—C6B176.8 (2)
C2A—N1A—C6A—C7A175.61 (16)N3B—C4B—C5B—C9B174.24 (19)
C2A—N1A—C6A—C5A−2.7 (3)C9B—C5B—C6B—N1B−174.81 (18)
C6A—N1A—C2A—N3A3.1 (3)C4B—C5B—C6B—N1B2.6 (3)
C2A—N3A—C4A—N4A179.13 (17)C4B—C5B—C6B—C7B−179.57 (19)
C2A—N3A—C4A—C5A−2.5 (3)C9B—C5B—C6B—C7B3.0 (3)
C4A—N3A—C2A—N1A−0.4 (3)C6B—C5B—C9B—C10B−93.4 (3)
C4A—N3A—C2A—N2A179.56 (17)C4B—C5B—C9B—C10B89.3 (3)
C2B—N1B—C6B—C7B−177.49 (18)C4B—C5B—C9B—C14B−89.7 (3)
C6B—N1B—C2B—N2B176.88 (18)C6B—C5B—C9B—C14B87.7 (3)
C6B—N1B—C2B—N3B−3.5 (3)C5B—C6B—C7B—C8B−103.5 (3)
C2B—N1B—C6B—C5B0.5 (3)N1B—C6B—C7B—C8B74.4 (3)
C4B—N3B—C2B—N2B−177.53 (19)C10B—C9B—C14B—C13B0.0 (4)
C2B—N3B—C4B—N4B−179.51 (19)C5B—C9B—C14B—C13B179.0 (3)
C2B—N3B—C4B—C5B0.5 (3)C5B—C9B—C10B—C11B−178.8 (2)
C4B—N3B—C2B—N1B2.8 (3)C14B—C9B—C10B—C11B0.1 (4)
C16A—N17A—C18A—C19A−0.5 (5)C9B—C10B—C11B—C12B−0.1 (4)
C18A—N17A—C16A—C15A1.8 (4)C10B—C11B—C12B—Cl1B179.7 (2)
C16B—N17B—C18B—C19B0.2 (5)C10B—C11B—C12B—C13B−0.1 (5)
C18B—N17B—C16B—C15B0.4 (5)C11B—C12B—C13B—C14B0.2 (5)
N3A—C4A—C5A—C6A2.8 (3)Cl1B—C12B—C13B—C14B−179.5 (3)
N3A—C4A—C5A—C9A−177.73 (16)C12B—C13B—C14B—C9B−0.2 (5)
N4A—C4A—C5A—C9A0.6 (3)C20A—C15A—C16A—N17A−1.8 (4)
N4A—C4A—C5A—C6A−178.94 (18)S1A—C15A—C20A—C19A−178.3 (3)
C4A—C5A—C6A—C7A−178.24 (17)S1A—C15A—C16A—N17A177.1 (2)
C4A—C5A—C9A—C10A110.3 (2)C16A—C15A—C20A—C19A0.5 (4)
C9A—C5A—C6A—N1A−179.61 (16)N17A—C18A—C19A—C20A−0.7 (6)
C4A—C5A—C6A—N1A−0.1 (2)C18A—C19A—C20A—C15A0.7 (5)
C9A—C5A—C6A—C7A2.3 (3)S1B—C15B—C16B—N17B−179.7 (2)
C6A—C5A—C9A—C10A−70.2 (2)C20B—C15B—C16B—N17B−0.6 (4)
C6A—C5A—C9A—C14A111.5 (2)S1B—C15B—C20B—C19B179.24 (17)
C4A—C5A—C9A—C14A−68.0 (2)C16B—C15B—C20B—C19B0.2 (3)
N1A—C6A—C7A—C8A−67.9 (2)N17B—C18B—C19B—C20B−0.6 (4)
C5A—C6A—C7A—C8A110.3 (2)C18B—C19B—C20B—C15B0.4 (3)
D—H···AD—HH···AD···AD—H···A
N2A—H2A2···O2Bi0.862.152.978 (2)162
N1A—H1A···O1Aiii0.861.922.764 (2)166
N1B—H1B···O1Biv0.861.972.805 (2)164
N2A—H2A1···O2Aiii0.862.002.808 (2)157
N4A—H4A1···N3Ai0.862.173.027 (2)178
N4A—H4A2···O2B0.862.222.909 (2)137
N2B—H2B2···O3Aiv0.862.153.003 (3)171
N2B—H2B1···O2Biv0.862.163.005 (2)167
N4B—H4B1···N17Aiv0.862.193.033 (3)168
C10B—H10B···O3A0.932.513.299 (3)143
C16A—H16A···N3Biv0.932.443.128 (3)131
C19B—H19B···O1Aii0.932.483.361 (3)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2A—H2A2⋯O2Bi0.862.152.978 (2)162
N1A—H1A⋯O1Aii0.861.922.764 (2)166
N1B—H1B⋯O1Biii0.861.972.805 (2)164
N2A—H2A1⋯O2Aii0.862.002.808 (2)157
N4A—H4A1⋯N3Ai0.862.173.027 (2)178
N4A—H4A2⋯O2B0.862.222.909 (2)137
N2B—H2B2⋯O3Aiii0.862.153.003 (3)171
N2B—H2B1⋯O2Biii0.862.163.005 (2)167
N4B—H4B1⋯N17Aiii0.862.193.033 (3)168
C10B—H10B⋯O3A0.932.513.299 (3)143
C16A—H16A⋯N3Biii0.932.443.128 (3)131
C19B—H19B⋯O1Aiv0.932.483.361 (3)157

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structural studies on bio-active compounds. Part XV. Structure-activity relationships for pyrimethamine and a series of diaminopyrimidine analogues versus bacterial dihydrofolate reductase.

Authors:  C E Sansom; C H Schwalbe; P A Lambert; R J Griffin; M F Stevens
Journal:  Biochim Biophys Acta       Date:  1989-03-16

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

4.  R2(2)(8) motifs in Aminopyrimidine sulfonate/carboxylate interactions: crystal structures of pyrimethaminium benzenesulfonate monohydrate (2:2:1) and 2-amino-4,6-dimethylpyrimidinium sulfosalicylate dihydrate (4:2:2).

Authors:  Kasthuri Balasubramani; Packianathan Thomas Muthiah; Daniel E Lynch
Journal:  Chem Cent J       Date:  2007-11-13       Impact factor: 4.215

  4 in total

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