Literature DB >> 21588405

Glycine ethyl ester hydro-chloride.

Yong-Jun He1, Pei Zou, Hong-Yong Wang, Hao Wu, Min-Hao Xie.   

Abstract

In the crystal structure of the title compound, C(4)H(10)NO(2) (+)·Cl(-) (systematic name: n class="Chemical">3-eth-oxy-3-oxopropan-1-aminium chlor-ide), there are strong inter-molecular N-H⋯Cl, C-H⋯Cl and C-H⋯O hydrogen-bonding inter-actions between the free chloride anion and the organic cation, resulting in a two-dimensional supra-molecular network in the ab plane.

Entities:  

Year:  2010        PMID: 21588405      PMCID: PMC3007393          DOI: 10.1107/S1600536810028849

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is an inter­mediate in the synthesis of dichloro­vinyl­cyclo­propane carb­oxy­lic acid, see: Xue (1995 ▶). For related structures, see: Taubald et al. (1984 ▶); Gainsford et al. (1986 ▶); Eduok et al. (1994 ▶).

Experimental

Crystal data

C4H10NO2 +·Cl− M = 139.58 Monoclinic, a = 8.965 (3) Å b = 12.543 (4) Å c = 5.972 (2) Å β = 103.630 (5)° V = 652.6 (4) Å3 Z = 4 Mo Kα radiation μ = 0.50 mm−1 T = 123 K 0.33 × 0.33 × 0.23 mm

Data collection

Rigaku SPIDER diffractometer 4996 measured reflections 1489 independent reflections 1294 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.064 S = 1.00 1489 reflections 87 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.40 e Å−3 Δρmin = −0.21 e Å−3 Data collection: RAPID-AUTO (Rigaku, 2004 ▶); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810028849/bv2143sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810028849/bv2143Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H10NO2+·ClF(000) = 296
Mr = 139.58Dx = 1.421 Mg m3
Monoclinic, P21/cMelting point: 145(1) K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.965 (3) ÅCell parameters from 1964 reflections
b = 12.543 (4) Åθ = 3.3–27.5°
c = 5.972 (2) ŵ = 0.50 mm1
β = 103.630 (5)°T = 123 K
V = 652.6 (4) Å3Block, colorless
Z = 40.33 × 0.33 × 0.23 mm
Rigaku SPIDER diffractometer1294 reflections with I > 2σ(I)
Radiation source: Rotating AnodeRint = 0.024
graphiteθmax = 27.5°, θmin = 3.3°
ω scansh = −10→11
4996 measured reflectionsk = −16→11
1489 independent reflectionsl = −7→7
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.027H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.064w = 1/[σ2(Fo2) + (0.031P)2 + 0.160P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
1489 reflectionsΔρmax = 0.40 e Å3
87 parametersΔρmin = −0.21 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.011 (3)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.00205 (3)0.38254 (2)0.24012 (5)0.01640 (11)
O10.52878 (10)0.38513 (7)0.85715 (16)0.0168 (2)
O20.34886 (10)0.29775 (7)0.59414 (15)0.0171 (2)
N10.11868 (13)0.36318 (9)0.7845 (2)0.0144 (2)
C20.38589 (14)0.35635 (9)0.7575 (2)0.0132 (3)
C10.27318 (14)0.40847 (10)0.8745 (2)0.0136 (3)
H1A0.30560.39651.04290.016*
H1B0.27090.48630.84610.016*
C30.64973 (15)0.34018 (11)0.7579 (2)0.0184 (3)
H3A0.62050.26720.70100.022*
H3B0.74640.33540.87860.022*
C40.67496 (16)0.40810 (11)0.5624 (2)0.0222 (3)
H4A0.58090.40960.43920.027*
H4B0.75890.37820.50290.027*
H4C0.70150.48080.61790.027*
H0A0.0807 (19)0.3806 (11)0.635 (3)0.022 (4)*
H0B0.054 (2)0.3873 (13)0.869 (3)0.035 (5)*
H0C0.1184 (19)0.2925 (15)0.797 (3)0.033 (5)*
U11U22U33U12U13U23
Cl10.01827 (17)0.01928 (19)0.01196 (16)0.00511 (12)0.00419 (11)0.00078 (11)
O10.0131 (4)0.0206 (5)0.0171 (5)−0.0019 (4)0.0045 (4)−0.0039 (4)
O20.0163 (4)0.0191 (5)0.0157 (5)−0.0003 (4)0.0033 (4)−0.0049 (4)
N10.0149 (5)0.0166 (6)0.0128 (5)−0.0010 (4)0.0055 (4)−0.0022 (4)
C20.0150 (6)0.0120 (6)0.0131 (6)−0.0006 (5)0.0043 (5)0.0027 (4)
C10.0136 (6)0.0132 (6)0.0141 (6)−0.0010 (5)0.0038 (5)−0.0020 (5)
C30.0130 (6)0.0224 (7)0.0202 (7)0.0013 (5)0.0046 (5)−0.0017 (5)
C40.0216 (7)0.0228 (7)0.0252 (7)−0.0032 (5)0.0115 (6)−0.0029 (6)
O1—C21.3290 (15)C1—H1A0.9900
O1—C31.4654 (16)C1—H1B0.9900
O2—C21.2040 (15)C3—C41.505 (2)
N1—C11.4762 (16)C3—H3A0.9900
N1—H0A0.902 (17)C3—H3B0.9900
N1—H0B0.906 (19)C4—H4A0.9800
N1—H0C0.890 (18)C4—H4B0.9800
C2—C11.5065 (18)C4—H4C0.9800
C2—O1—C3116.20 (10)C2—C1—H1B109.7
C1—N1—H0A111.7 (10)H1A—C1—H1B108.2
C1—N1—H0B109.8 (12)O1—C3—C4110.89 (11)
H0A—N1—H0B109.0 (16)O1—C3—H3A109.5
C1—N1—H0C111.9 (11)C4—C3—H3A109.5
H0A—N1—H0C108.6 (14)O1—C3—H3B109.5
H0B—N1—H0C105.6 (15)C4—C3—H3B109.5
O2—C2—O1125.54 (12)H3A—C3—H3B108.0
O2—C2—C1123.62 (12)C3—C4—H4A109.5
O1—C2—C1110.83 (11)C3—C4—H4B109.5
N1—C1—C2109.79 (10)H4A—C4—H4B109.5
N1—C1—H1A109.7C3—C4—H4C109.5
C2—C1—H1A109.7H4A—C4—H4C109.5
N1—C1—H1B109.7H4B—C4—H4C109.5
C3—O1—C2—O2−0.45 (18)O1—C2—C1—N1−171.55 (10)
C3—O1—C2—C1−179.62 (10)C2—O1—C3—C486.87 (14)
O2—C2—C1—N19.27 (17)
D—H···AD—HH···AD···AD—H···A
N1—H0A···Cl10.904 (17)2.300 (17)3.1845 (16)166.1 (12)
N1—H0B···Cl1i0.906 (18)2.386 (18)3.1658 (16)144.3 (15)
N1—H0C···Cl1ii0.890 (19)2.435 (19)3.2566 (16)153.7 (15)
C1—H1A···O2ii0.992.472.9072 (18)106
C3—H3B···Cl1iii0.992.793.7529 (18)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H0A⋯Cl10.904 (17)2.300 (17)3.1845 (16)166.1 (12)
N1—H0B⋯Cl1i0.906 (18)2.386 (18)3.1658 (16)144.3 (15)
N1—H0C⋯Cl10.890 (19)2.435 (19)3.2566 (16)153.7 (15)
C1—H1A⋯O20.992.472.9072 (18)106
C3—H3B⋯Cl1ii0.992.793.7529 (18)164

Symmetry codes: (i) ; (ii) .

  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  1 in total

1.  3-Meth-oxy-3-oxopropanaminium chloride.

Authors:  Tobias Gruber; Christopher J Schofield; Amber L Thompson
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-02-04
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.