Literature DB >> 21588333

(S)-3-Chloro-4-(4-ethyl-piperazin-1-yl)-5-[(1R,2S,5R)-2-isopropyl-5-methyl-cyclo-hex-yloxy]furan-2(5H)-one.

Jian-Hua Fu1, Zhao-Yang Wang, Kai Yang, Chao-Xu Mao.   

Abstract

The title compound, C(20)H(33)ClN(2)O(3), was obtained via a tandem asymmetric Michael addition-elimination reaction of 3,4-dichloro-5-(S)-(l-menth-yloxy)furan-2(5H)-one and 1-ethyl-piperazine in the presence of potassium fluoride. The mol-ecular structure contains an approximately planar five-membered furan-one ring [maximum atomic deviation = 0.024 (2) Å] and two six-membered rings adopting chair conformations. Weak inter-molecular C-H⋯O hydrogen bonding is present in the crystal structure.

Entities:  

Year:  2010        PMID: 21588333      PMCID: PMC3007345          DOI: 10.1107/S1600536810026929

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound is a 4-amino-2(5H)-furan­one derivative. For the biological activity of 4-amino-2(5H)-furan­ones, see: Kimura et al. (2000 ▶); Tanoury et al. (2008 ▶). For the asymmetric Michael addition reactions of 2(5H)-furan­ones, see: Bertrand et al. (2000 ▶); He et al. (2006 ▶); Sarma et al. (2007 ▶). For the synthesis of the title compound, see: Song et al. (2009 ▶).

Experimental

Crystal data

C20H33ClN2O3 M = 384.93 Orthorhombic, a = 8.7168 (15) Å b = 10.1470 (18) Å c = 24.478 (4) Å V = 2165.1 (6) Å3 Z = 4 Mo Kα radiation μ = 0.20 mm−1 T = 298 K 0.23 × 0.20 × 0.16 mm

Data collection

Bruker APEXII area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.956, T max = 0.969 12202 measured reflections 4384 independent reflections 2730 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.107 S = 1.01 4384 reflections 240 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.17 e Å−3 Absolute structure: Flack (1983 ▶), 1866 Friedel pairs Flack parameter: 0.00 (8) Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810026929/xu2787sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810026929/xu2787Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H33ClN2O3F(000) = 832.0
Mr = 384.93Dx = 1.181 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 1893 reflections
a = 8.7168 (15) Åθ = 2.6–19.0°
b = 10.1470 (18) ŵ = 0.20 mm1
c = 24.478 (4) ÅT = 298 K
V = 2165.1 (6) Å3Block, colourless
Z = 40.23 × 0.20 × 0.16 mm
Bruker APEXII area-detector diffractometer4384 independent reflections
Radiation source: fine-focus sealed tube2730 reflections with I > 2σ(I)
graphiteRint = 0.045
φ and ω scanθmax = 26.3°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→10
Tmin = 0.956, Tmax = 0.969k = −8→12
12202 measured reflectionsl = −30→30
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.046H-atom parameters constrained
wR(F2) = 0.107w = 1/[σ2(Fo2) + (0.0425P)2 + 0.0387P] where P = (Fo2 + 2Fc2)/3
S = 1.01(Δ/σ)max < 0.001
4384 reflectionsΔρmax = 0.13 e Å3
240 parametersΔρmin = −0.17 e Å3
0 restraintsAbsolute structure: Flack (1983), 1866 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.00 (8)
Experimental. Data for (I): [α]20°D = -32.5° (c 0.452, CH3CH2OH); 1H NMR (400 MHz, CDCl3, TMS): 0.720 (3H, d, J = 6.8 Hz, CH3), 0.766-1.142 (12H, m, CH, CH2, 3CH3), 1.221-1.388 (2H, m, 2CH), 1.611-1.660 (2H, m, CH2), 2.103-2.227 (2H, m, CH2), 2.435 (2H, d, J = 7.2 Hz, CH2), 2.495-2.515 (4H, m, 2CH2), 3.484-3.548 (1H, ddd, J = 4.4 Hz, J = 4.4 Hz,J = 4.4 Hz,CH), 3.591-3.624 (2H, m, CH2), 3.729-3.761 (2H, m, CH2), 5.751 (1H, s, CH), ESI-MS, m/z (%): Calcd for C20H34ClN2O3+([M+H]+): 385.22, Found: 385.39 (72.0).
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.92355 (9)−0.19339 (9)0.15783 (3)0.0824 (3)
C11.0114 (3)−0.1277 (3)0.25997 (11)0.0600 (7)
C20.8953 (3)−0.1150 (3)0.21895 (10)0.0527 (7)
C30.7814 (3)−0.0351 (2)0.23643 (9)0.0464 (6)
C40.8249 (3)0.0073 (3)0.29384 (9)0.0486 (6)
H40.83000.10350.29670.058*
C50.7051 (3)0.0215 (3)0.38183 (9)0.0526 (6)
H50.66990.11200.37560.063*
C60.5819 (3)−0.0524 (3)0.41368 (10)0.0604 (7)
H60.6217−0.14140.42000.072*
C70.5633 (4)0.0115 (4)0.46984 (11)0.0893 (10)
H7A0.52200.09970.46530.107*
H7B0.4903−0.03910.49110.107*
C80.7140 (4)0.0195 (4)0.50074 (12)0.1017 (12)
H8A0.69750.06480.53510.122*
H8B0.7494−0.06900.50890.122*
C90.8364 (4)0.0913 (4)0.46850 (12)0.0842 (10)
H90.80150.18200.46260.101*
C110.9897 (4)0.0966 (4)0.49839 (12)0.1230 (15)
H11A0.97750.14390.53210.185*
H11B1.06400.14070.47600.185*
H11C1.02410.00860.50600.185*
C120.4297 (3)−0.0685 (3)0.38336 (12)0.0701 (8)
H120.4543−0.10310.34700.084*
C130.3255 (4)−0.1697 (4)0.41080 (14)0.1061 (13)
H13A0.3810−0.25040.41610.159*
H13B0.2378−0.18590.38800.159*
H13C0.2921−0.13650.44550.159*
C140.3423 (4)0.0598 (4)0.37461 (14)0.0934 (11)
H14A0.25440.04360.35190.140*
H14B0.40810.12290.35710.140*
H14C0.30920.09380.40930.140*
N20.6474 (2)0.0035 (2)0.21506 (8)0.0520 (5)
C150.5990 (3)−0.0392 (3)0.16045 (10)0.0684 (8)
H15A0.6371−0.12750.15350.082*
H15B0.64250.01920.13320.082*
C160.4266 (3)−0.0384 (3)0.15570 (10)0.0656 (8)
H16A0.3968−0.06540.11920.079*
H16B0.3831−0.10050.18150.079*
N10.3681 (2)0.0924 (2)0.16674 (9)0.0557 (6)
C170.4034 (3)0.1223 (3)0.22317 (10)0.0628 (8)
H17A0.35790.05590.24660.075*
H17B0.35910.20690.23280.075*
C180.5741 (3)0.1263 (2)0.23249 (11)0.0581 (7)
H18A0.61780.19950.21230.070*
H18B0.59440.14060.27100.070*
C190.2032 (3)0.1040 (3)0.15658 (12)0.0750 (9)
H19A0.16860.18910.16980.090*
H19B0.15030.03670.17740.090*
C200.1589 (4)0.0909 (4)0.09789 (13)0.0967 (12)
H20A0.22300.14680.07600.145*
H20B0.05360.11650.09340.145*
H20C0.17150.00100.08650.145*
O30.71812 (18)−0.04391 (16)0.32993 (6)0.0511 (4)
O10.97260 (19)−0.05115 (19)0.30335 (7)0.0606 (5)
O21.1286 (2)−0.1903 (2)0.25964 (9)0.0842 (7)
C100.8549 (3)0.0261 (3)0.41285 (10)0.0655 (8)
H10A0.93000.07470.39160.079*
H10B0.8931−0.06290.41780.079*
U11U22U33U12U13U23
Cl10.0705 (5)0.0943 (6)0.0825 (5)0.0125 (5)0.0059 (4)−0.0335 (5)
C10.0460 (16)0.0667 (19)0.0674 (18)−0.0018 (15)0.0059 (15)−0.0001 (15)
C20.0478 (16)0.0528 (17)0.0576 (16)0.0012 (14)0.0048 (13)−0.0056 (13)
C30.0434 (14)0.0465 (16)0.0492 (14)−0.0033 (13)0.0018 (12)0.0005 (12)
C40.0420 (14)0.0505 (16)0.0532 (15)0.0018 (12)0.0031 (11)0.0020 (13)
C50.0592 (16)0.0538 (16)0.0448 (14)0.0042 (15)0.0001 (12)−0.0004 (13)
C60.0641 (18)0.0607 (17)0.0564 (16)0.0063 (16)0.0095 (14)0.0025 (14)
C70.092 (2)0.120 (3)0.0563 (18)0.002 (2)0.0142 (17)−0.0032 (19)
C80.109 (3)0.148 (4)0.0476 (17)0.007 (3)0.0026 (19)0.005 (2)
C90.091 (2)0.104 (3)0.0579 (19)0.005 (2)−0.0121 (17)−0.0102 (19)
C110.114 (3)0.186 (4)0.069 (2)−0.008 (3)−0.029 (2)−0.019 (3)
C120.0611 (19)0.076 (2)0.0736 (18)−0.0031 (18)0.0139 (16)−0.0076 (17)
C130.092 (3)0.111 (3)0.115 (3)−0.026 (2)0.037 (2)−0.002 (2)
C140.069 (2)0.111 (3)0.101 (3)0.019 (2)0.0029 (18)−0.004 (2)
N20.0535 (13)0.0548 (13)0.0477 (12)0.0074 (11)−0.0039 (9)−0.0076 (10)
C150.074 (2)0.079 (2)0.0519 (16)0.0173 (17)−0.0076 (14)−0.0158 (15)
C160.0697 (19)0.069 (2)0.0585 (16)0.0001 (17)−0.0149 (15)−0.0098 (15)
N10.0487 (13)0.0603 (15)0.0582 (13)0.0017 (11)−0.0077 (10)−0.0035 (12)
C170.0540 (17)0.070 (2)0.0643 (18)0.0115 (15)−0.0043 (14)−0.0135 (15)
C180.0570 (16)0.0541 (17)0.0631 (16)0.0097 (14)−0.0130 (14)−0.0084 (14)
C190.0573 (18)0.090 (2)0.077 (2)−0.0004 (17)−0.0157 (16)−0.0069 (18)
C200.083 (2)0.113 (3)0.094 (2)0.000 (2)−0.0368 (19)0.008 (2)
O30.0510 (10)0.0557 (11)0.0465 (9)−0.0049 (9)0.0040 (8)−0.0008 (8)
O10.0435 (10)0.0781 (13)0.0601 (11)0.0085 (10)−0.0047 (8)−0.0019 (10)
O20.0541 (12)0.0954 (16)0.1032 (17)0.0258 (12)−0.0054 (11)−0.0103 (14)
C100.0653 (18)0.079 (2)0.0524 (16)−0.0018 (17)−0.0031 (13)0.0017 (15)
Cl1—C21.712 (2)C12—H120.9800
C1—O21.203 (3)C13—H13A0.9600
C1—O11.358 (3)C13—H13B0.9600
C1—C21.431 (4)C13—H13C0.9600
C2—C31.351 (3)C14—H14A0.9600
C3—N21.338 (3)C14—H14B0.9600
C3—C41.518 (3)C14—H14C0.9600
C4—O31.384 (3)N2—C181.463 (3)
C4—O11.437 (3)N2—C151.468 (3)
C4—H40.9800C15—C161.507 (4)
C5—O31.438 (3)C15—H15A0.9700
C5—C101.511 (3)C15—H15B0.9700
C5—C61.524 (4)C16—N11.447 (3)
C5—H50.9800C16—H16A0.9700
C6—C71.529 (4)C16—H16B0.9700
C6—C121.529 (4)N1—C171.447 (3)
C6—H60.9800N1—C191.463 (3)
C7—C81.518 (4)C17—C181.506 (3)
C7—H7A0.9700C17—H17A0.9700
C7—H7B0.9700C17—H17B0.9700
C8—C91.514 (5)C18—H18A0.9700
C8—H8A0.9700C18—H18B0.9700
C8—H8B0.9700C19—C201.494 (4)
C9—C101.523 (4)C19—H19A0.9700
C9—C111.524 (4)C19—H19B0.9700
C9—H90.9800C20—H20A0.9600
C11—H11A0.9600C20—H20B0.9600
C11—H11B0.9600C20—H20C0.9600
C11—H11C0.9600C10—H10A0.9700
C12—C141.524 (4)C10—H10B0.9700
C12—C131.527 (4)
O2—C1—O1121.2 (3)C12—C13—H13C109.5
O2—C1—C2130.0 (3)H13A—C13—H13C109.5
O1—C1—C2108.7 (2)H13B—C13—H13C109.5
C3—C2—C1110.6 (2)C12—C14—H14A109.5
C3—C2—Cl1131.4 (2)C12—C14—H14B109.5
C1—C2—Cl1118.0 (2)H14A—C14—H14B109.5
N2—C3—C2133.9 (2)C12—C14—H14C109.5
N2—C3—C4119.8 (2)H14A—C14—H14C109.5
C2—C3—C4106.2 (2)H14B—C14—H14C109.5
O3—C4—O1110.14 (19)C3—N2—C18121.1 (2)
O3—C4—C3108.46 (19)C3—N2—C15121.4 (2)
O1—C4—C3104.89 (19)C18—N2—C15113.0 (2)
O3—C4—H4111.1N2—C15—C16110.8 (2)
O1—C4—H4111.1N2—C15—H15A109.5
C3—C4—H4111.1C16—C15—H15A109.5
O3—C5—C10113.0 (2)N2—C15—H15B109.5
O3—C5—C6106.3 (2)C16—C15—H15B109.5
C10—C5—C6111.5 (2)H15A—C15—H15B108.1
O3—C5—H5108.6N1—C16—C15110.0 (2)
C10—C5—H5108.6N1—C16—H16A109.7
C6—C5—H5108.6C15—C16—H16A109.7
C5—C6—C7109.0 (2)N1—C16—H16B109.7
C5—C6—C12114.6 (2)C15—C16—H16B109.7
C7—C6—C12112.9 (2)H16A—C16—H16B108.2
C5—C6—H6106.6C17—N1—C16107.2 (2)
C7—C6—H6106.6C17—N1—C19110.7 (2)
C12—C6—H6106.6C16—N1—C19112.9 (2)
C8—C7—C6112.2 (3)N1—C17—C18111.1 (2)
C8—C7—H7A109.2N1—C17—H17A109.4
C6—C7—H7A109.2C18—C17—H17A109.4
C8—C7—H7B109.2N1—C17—H17B109.4
C6—C7—H7B109.2C18—C17—H17B109.4
H7A—C7—H7B107.9H17A—C17—H17B108.0
C9—C8—C7112.1 (3)N2—C18—C17111.4 (2)
C9—C8—H8A109.2N2—C18—H18A109.4
C7—C8—H8A109.2C17—C18—H18A109.4
C9—C8—H8B109.2N2—C18—H18B109.4
C7—C8—H8B109.2C17—C18—H18B109.4
H8A—C8—H8B107.9H18A—C18—H18B108.0
C8—C9—C10109.4 (3)N1—C19—C20114.2 (3)
C8—C9—C11112.6 (3)N1—C19—H19A108.7
C10—C9—C11110.6 (3)C20—C19—H19A108.7
C8—C9—H9108.0N1—C19—H19B108.7
C10—C9—H9108.0C20—C19—H19B108.7
C11—C9—H9108.0H19A—C19—H19B107.6
C9—C11—H11A109.5C19—C20—H20A109.5
C9—C11—H11B109.5C19—C20—H20B109.5
H11A—C11—H11B109.5H20A—C20—H20B109.5
C9—C11—H11C109.5C19—C20—H20C109.5
H11A—C11—H11C109.5H20A—C20—H20C109.5
H11B—C11—H11C109.5H20B—C20—H20C109.5
C14—C12—C13109.8 (3)C4—O3—C5116.3 (2)
C14—C12—C6114.3 (3)C1—O1—C4109.41 (19)
C13—C12—C6112.0 (3)C5—C10—C9111.8 (2)
C14—C12—H12106.8C5—C10—H10A109.3
C13—C12—H12106.8C9—C10—H10A109.3
C6—C12—H12106.8C5—C10—H10B109.3
C12—C13—H13A109.5C9—C10—H10B109.3
C12—C13—H13B109.5H10A—C10—H10B107.9
H13A—C13—H13B109.5
D—H···AD—HH···AD···AD—H···A
C4—H4···O2i0.982.533.361 (4)142
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C4—H4⋯O2i0.982.533.361 (4)142

Symmetry code: (i) .

  4 in total

1.  Peniamidienone and penidilamine, plant growth regulators produced by the fungus Penicillium sp. No. 13.

Authors:  Y Kimura; T Mizuno; T Kawano; K Okada; A Shimada
Journal:  Phytochemistry       Date:  2000-04       Impact factor: 4.072

2.  Novel synthons from mucochloric acid: the first use of alpha,beta-dichloro-gamma-butenolides and gamma-butyrolactams for direct vinylogous aldol addition.

Authors:  Koushik Das Sarma; Ji Zhang; Timothy T Curran
Journal:  J Org Chem       Date:  2007-03-31       Impact factor: 4.354

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Development of a novel Pd-catalyzed N-acyl vinylogous carbamate synthesis for the key intermediate of ICE inhibitor VX-765.

Authors:  Gerald J Tanoury; Minzhang Chen; Yong Dong; Raymond E Forslund; Derek Magdziak
Journal:  Org Lett       Date:  2007-12-15       Impact factor: 6.005

  4 in total

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