Literature DB >> 21588281

N-[2-(3-Methyl-1-oxo-1,2-dihydro-pyrrolo-[1,2-a]pyrazin-2-yl)eth-yl]methane-sulfonamide.

Salman Tariq Khan, Peng Yu, Suchada Chantrapromma, Nighat Afza, Aisha Nelofar.   

Abstract

In the title compound, C(11)H(15)N(3)O(3)S, the dihedral angle between the five- and six-membered rings is 1.13 (18)°. The ethyl-methane-sulfonamide group is in a (+)synclinal conformation. In the crystal, inter-molecular N-H⋯O and C-H⋯O hydrogen-bond inter-actions link mol-ecules into zigzag ribbons parallel to the b axis. The ribbons are further connected by C-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21588281      PMCID: PMC3007363          DOI: 10.1107/S1600536810026115

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of pyrrolo­pyrazinone derivatives, see: Dubis et al. (1995 ▶); Micheli et al. (2008 ▶); Wang et al. (2004 ▶); Zöllinger et al. (2007 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

C11H15N3O3S M = 269.33 Monoclinic, a = 5.492 (1) Å b = 20.631 (4) Å c = 11.212 (2) Å β = 99.953 (6)° V = 1251.3 (4) Å3 Z = 4 Mo Kα radiation μ = 0.26 mm−1 T = 113 K 0.18 × 0.12 × 0.10 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.954, T max = 0.974 9267 measured reflections 2969 independent reflections 2499 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.105 S = 1.05 2969 reflections 169 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.46 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810026115/rz2471sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810026115/rz2471Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H15N3O3SF(000) = 568
Mr = 269.33Dx = 1.430 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2969 reflections
a = 5.492 (1) Åθ = 2.0–27.9°
b = 20.631 (4) ŵ = 0.26 mm1
c = 11.212 (2) ÅT = 113 K
β = 99.953 (6)°Block, colourless
V = 1251.3 (4) Å30.18 × 0.12 × 0.10 mm
Z = 4
Rigaku Saturn CCD area-detector diffractometer2969 independent reflections
Radiation source: rotating anode2499 reflections with I > 2σ(I)
multilayerRint = 0.036
Detector resolution: 14.63 pixels mm-1θmax = 27.9°, θmin = 2.0°
ω and φ scansh = −6→7
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −27→26
Tmin = 0.954, Tmax = 0.974l = −14→14
9267 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.058P)2 + 0.0584P] where P = (Fo2 + 2Fc2)/3
2969 reflections(Δ/σ)max = 0.001
169 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.99680 (7)0.594929 (18)0.15089 (3)0.02298 (13)
O10.7267 (2)0.54127 (5)0.61880 (10)0.0287 (3)
O21.2319 (2)0.57634 (7)0.12187 (11)0.0358 (3)
O30.9462 (2)0.66268 (6)0.16584 (12)0.0391 (3)
N10.7215 (2)0.63970 (6)0.52476 (11)0.0204 (3)
N20.3756 (2)0.68495 (6)0.65521 (11)0.0210 (3)
N30.9639 (3)0.55700 (7)0.27108 (13)0.0291 (3)
H1N31.063 (4)0.5283 (10)0.2942 (19)0.042 (6)*
C10.6456 (3)0.59733 (7)0.60737 (14)0.0212 (3)
C20.6279 (3)0.70370 (7)0.50739 (14)0.0211 (3)
C30.4595 (3)0.72539 (7)0.57091 (13)0.0222 (3)
H3A0.39700.76830.55870.027*
C40.2052 (3)0.69648 (8)0.72848 (15)0.0273 (4)
H4A0.11370.73530.73180.033*
C50.1905 (3)0.64143 (8)0.79670 (15)0.0305 (4)
H5A0.08720.63600.85570.037*
C60.3529 (3)0.59492 (7)0.76456 (14)0.0251 (4)
H6A0.37890.55240.79700.030*
C70.4690 (3)0.62255 (7)0.67623 (14)0.0214 (3)
C80.9055 (3)0.61459 (8)0.45521 (14)0.0230 (3)
H8A1.02420.58630.50790.028*
H8B0.99890.65120.42820.028*
C90.7814 (3)0.57612 (7)0.34506 (14)0.0240 (3)
H9A0.70180.53700.37210.029*
H9B0.65150.60290.29620.029*
C100.7647 (3)0.56615 (9)0.03536 (15)0.0304 (4)
H10A0.77390.5893−0.04010.046*
H10B0.60240.57350.05800.046*
H10C0.78830.51960.02370.046*
C110.7287 (3)0.74663 (8)0.41881 (14)0.0267 (4)
H11A0.63900.78790.41100.040*
H11B0.70810.72520.33970.040*
H11C0.90470.75470.44810.040*
U11U22U33U12U13U23
S10.0228 (2)0.0234 (2)0.0228 (2)−0.00198 (15)0.00438 (15)0.00159 (14)
O10.0331 (7)0.0212 (6)0.0301 (6)0.0054 (5)0.0009 (5)0.0038 (4)
O20.0215 (6)0.0569 (8)0.0305 (7)−0.0040 (6)0.0083 (5)−0.0009 (6)
O30.0553 (9)0.0209 (6)0.0401 (7)−0.0029 (6)0.0049 (6)0.0035 (5)
N10.0229 (7)0.0194 (6)0.0188 (6)0.0010 (5)0.0036 (5)0.0001 (5)
N20.0229 (7)0.0194 (6)0.0202 (6)−0.0007 (5)0.0024 (5)−0.0013 (5)
N30.0360 (9)0.0285 (7)0.0253 (7)0.0150 (7)0.0128 (6)0.0074 (6)
C10.0220 (8)0.0197 (7)0.0196 (7)−0.0011 (6)−0.0030 (6)0.0012 (5)
C20.0240 (8)0.0184 (7)0.0194 (7)−0.0029 (6)−0.0004 (6)0.0007 (5)
C30.0266 (8)0.0167 (7)0.0226 (7)0.0002 (6)0.0024 (6)0.0014 (6)
C40.0254 (9)0.0306 (8)0.0272 (8)−0.0007 (7)0.0081 (7)−0.0049 (7)
C50.0311 (10)0.0349 (9)0.0265 (9)−0.0065 (7)0.0074 (7)−0.0029 (7)
C60.0301 (9)0.0248 (8)0.0196 (8)−0.0065 (7)0.0022 (6)0.0007 (6)
C70.0237 (8)0.0197 (7)0.0192 (7)−0.0016 (6)−0.0009 (6)0.0001 (6)
C80.0204 (8)0.0245 (7)0.0242 (8)0.0014 (6)0.0043 (6)0.0004 (6)
C90.0253 (9)0.0249 (8)0.0232 (8)0.0021 (6)0.0080 (6)−0.0010 (6)
C100.0217 (9)0.0424 (10)0.0272 (9)−0.0040 (7)0.0046 (7)−0.0043 (7)
C110.0316 (9)0.0227 (8)0.0259 (8)−0.0020 (7)0.0053 (7)0.0033 (6)
S1—O21.4371 (12)C4—C51.380 (2)
S1—O31.4405 (12)C4—H4A0.9500
S1—N31.5952 (14)C5—C61.399 (2)
S1—C101.7563 (17)C5—H5A0.9500
O1—C11.2378 (17)C6—C71.389 (2)
N1—C11.3890 (19)C6—H6A0.9500
N1—C21.4179 (19)C8—C91.526 (2)
N1—C81.4731 (19)C8—H8A0.9900
N2—C41.3687 (19)C8—H8B0.9900
N2—C71.3907 (19)C9—H9A0.9900
N2—C31.3973 (19)C9—H9B0.9900
N3—C91.4616 (19)C10—H10A0.9800
N3—H1N30.82 (2)C10—H10B0.9800
C1—C71.438 (2)C10—H10C0.9800
C2—C31.338 (2)C11—H11A0.9800
C2—C111.506 (2)C11—H11B0.9800
C3—H3A0.9500C11—H11C0.9800
O2—S1—O3118.97 (8)C7—C6—C5107.08 (14)
O2—S1—N3107.32 (8)C7—C6—H6A126.5
O3—S1—N3108.98 (8)C5—C6—H6A126.5
O2—S1—C10107.98 (8)C6—C7—N2107.42 (13)
O3—S1—C10106.48 (8)C6—C7—C1132.03 (14)
N3—S1—C10106.47 (8)N2—C7—C1120.49 (13)
C1—N1—C2122.30 (13)N1—C8—C9111.09 (13)
C1—N1—C8116.35 (12)N1—C8—H8A109.4
C2—N1—C8121.35 (12)C9—C8—H8A109.4
C4—N2—C7109.25 (13)N1—C8—H8B109.4
C4—N2—C3129.93 (13)C9—C8—H8B109.4
C7—N2—C3120.82 (13)H8A—C8—H8B108.0
C9—N3—S1122.41 (12)N3—C9—C8110.19 (13)
C9—N3—H1N3120.1 (14)N3—C9—H9A109.6
S1—N3—H1N3117.2 (14)C8—C9—H9A109.6
O1—C1—N1120.88 (14)N3—C9—H9B109.6
O1—C1—C7123.13 (14)C8—C9—H9B109.6
N1—C1—C7115.99 (13)H9A—C9—H9B108.1
C3—C2—N1120.38 (13)S1—C10—H10A109.5
C3—C2—C11121.40 (14)S1—C10—H10B109.5
N1—C2—C11118.19 (13)H10A—C10—H10B109.5
C2—C3—N2119.95 (14)S1—C10—H10C109.5
C2—C3—H3A120.0H10A—C10—H10C109.5
N2—C3—H3A120.0H10B—C10—H10C109.5
N2—C4—C5107.54 (14)C2—C11—H11A109.5
N2—C4—H4A126.2C2—C11—H11B109.5
C5—C4—H4A126.2H11A—C11—H11B109.5
C4—C5—C6108.71 (15)C2—C11—H11C109.5
C4—C5—H5A125.6H11A—C11—H11C109.5
C6—C5—H5A125.6H11B—C11—H11C109.5
O2—S1—N3—C9163.37 (13)N2—C4—C5—C6−0.44 (19)
O3—S1—N3—C933.29 (16)C4—C5—C6—C70.49 (19)
C10—S1—N3—C9−81.20 (15)C5—C6—C7—N2−0.36 (17)
C2—N1—C1—O1178.48 (14)C5—C6—C7—C1−177.60 (16)
C8—N1—C1—O1−1.4 (2)C4—N2—C7—C60.09 (17)
C2—N1—C1—C7−1.1 (2)C3—N2—C7—C6179.43 (13)
C8—N1—C1—C7179.04 (12)C4—N2—C7—C1177.72 (14)
C1—N1—C2—C3−0.4 (2)C3—N2—C7—C1−2.9 (2)
C8—N1—C2—C3179.51 (14)O1—C1—C7—C60.1 (3)
C1—N1—C2—C11177.87 (14)N1—C1—C7—C6179.63 (15)
C8—N1—C2—C11−2.2 (2)O1—C1—C7—N2−176.85 (14)
N1—C2—C3—N20.2 (2)N1—C1—C7—N22.7 (2)
C11—C2—C3—N2−177.95 (14)C1—N1—C8—C983.75 (16)
C4—N2—C3—C2−179.39 (16)C2—N1—C8—C9−96.15 (16)
C7—N2—C3—C21.4 (2)S1—N3—C9—C8−100.44 (15)
C7—N2—C4—C50.21 (18)N1—C8—C9—N3174.55 (12)
C3—N2—C4—C5−179.05 (15)
Cg1 is the centroid of the N2/C4–C7 ring.
D—H···AD—HH···AD···AD—H···A
N3—H1N3···O1i0.82 (2)1.99 (2)2.7923 (18)168 (2)
C4—H4A···O3ii0.952.363.258 (2)157
C8—H8A···Cg1iii0.992.963.5153 (19)116
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the N2/C4–C7 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H1N3⋯O1i0.82 (2)1.99 (2)2.7923 (18)168 (2)
C4—H4A⋯O3ii0.952.363.258 (2)157
C8—H8ACg1iii0.992.963.5153 (19)116

Symmetry codes: (i) ; (ii) ; (iii) .

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