| Literature DB >> 21588271 |
A Srinivasa Rao1, Bharat Kumar Tripuramallu, Kishore Ravada, Samar K Das.
Abstract
In the crystal structure of the title compound, C(6)H(9)N(2) (+)·ClCH(2)COO(-), prepared by the reaction of OPDA (orthophenelynediamine) with chloro-acetic -acid, N-H⋯O hydrogen bonds generate ladder-like chains and very weak inter-molecular C-H⋯Cl hydrogen-bonding inter-actions between the anions and cations lead to a supra-molecular network. C-H⋯O inter-actions also occur.Entities:
Year: 2010 PMID: 21588271 PMCID: PMC3007232 DOI: 10.1107/S1600536810024554
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H9N2+·C2H2ClO2− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 5050 reflections |
| θ = 2.3–26.1° | |
| µ = 0.37 mm−1 | |
| β = 110.439 (12)° | Needle, colorless |
| 0.36 × 0.20 × 0.16 mm | |
| Bruker SMART CCD area-detector diffractometer | 1922 independent reflections |
| Radiation source: fine-focus sealed tube | 1651 reflections with |
| graphite | |
| phi and ω scans | θmax = 26.2°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 9366 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1922 reflections | (Δ/σ)max = 0.001 |
| 126 parameters | Δρmax = 0.33 e Å−3 |
| 0 restraints | Δρmin = −0.29 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| N1 | 0.38338 (15) | 0.3513 (3) | 0.89834 (8) | 0.0425 (4) | |
| H1A | 0.4696 | 0.3585 | 0.9056 | 0.051* | |
| H1B | 0.3687 | 0.1914 | 0.9249 | 0.051* | |
| H1C | 0.3625 | 0.5114 | 0.9189 | 0.051* | |
| N2 | 0.4570 (2) | −0.0303 (6) | 0.80725 (13) | 0.0819 (7) | |
| H2A | 0.4758 | −0.1428 | 0.7809 | 0.098* | |
| H2B | 0.5201 | 0.0394 | 0.8428 | 0.098* | |
| C1 | 0.1923 (2) | 0.4640 (5) | 0.79778 (11) | 0.0539 (5) | |
| H1 | 0.1695 | 0.5954 | 0.8269 | 0.065* | |
| C2 | 0.1128 (2) | 0.4187 (6) | 0.72902 (12) | 0.0641 (6) | |
| H2 | 0.0360 | 0.5167 | 0.7117 | 0.077* | |
| C3 | 0.1485 (3) | 0.2267 (6) | 0.68631 (12) | 0.0655 (7) | |
| H3 | 0.0950 | 0.1932 | 0.6400 | 0.079* | |
| C4 | 0.2628 (2) | 0.0833 (6) | 0.71141 (12) | 0.0630 (6) | |
| H4 | 0.2861 | −0.0422 | 0.6813 | 0.076* | |
| C5 | 0.3443 (2) | 0.1229 (5) | 0.78112 (11) | 0.0499 (5) | |
| C6 | 0.30556 (18) | 0.3157 (4) | 0.82373 (10) | 0.0422 (4) | |
| Cl1 | 0.88856 (6) | −0.20415 (18) | 1.05309 (4) | 0.0787 (3) | |
| O1 | 0.63853 (15) | 0.3221 (4) | 0.92605 (9) | 0.0630 (5) | |
| O2 | 0.65904 (16) | 0.1467 (3) | 1.03239 (8) | 0.0563 (4) | |
| C7 | 0.69161 (19) | 0.1690 (4) | 0.97966 (10) | 0.0453 (5) | |
| C8 | 0.8017 (2) | −0.0074 (7) | 0.97533 (13) | 0.0612 (6) | |
| H8A | 0.855 (3) | 0.122 (8) | 0.9661 (16) | 0.090 (10)* | |
| H8B | 0.767 (3) | −0.161 (9) | 0.938 (2) | 0.118 (13)* |
| N1 | 0.0520 (9) | 0.0381 (8) | 0.0424 (8) | −0.0007 (7) | 0.0229 (7) | −0.0024 (6) |
| N2 | 0.0660 (13) | 0.0873 (16) | 0.0926 (16) | 0.0075 (12) | 0.0278 (12) | −0.0425 (13) |
| C1 | 0.0615 (13) | 0.0508 (12) | 0.0534 (12) | 0.0014 (10) | 0.0250 (10) | 0.0040 (9) |
| C2 | 0.0615 (13) | 0.0702 (15) | 0.0563 (13) | 0.0000 (12) | 0.0150 (11) | 0.0151 (12) |
| C3 | 0.0715 (15) | 0.0782 (16) | 0.0434 (12) | −0.0223 (13) | 0.0160 (11) | 0.0026 (11) |
| C4 | 0.0819 (17) | 0.0650 (14) | 0.0515 (12) | −0.0217 (13) | 0.0351 (12) | −0.0159 (11) |
| C5 | 0.0571 (12) | 0.0476 (11) | 0.0528 (11) | −0.0117 (9) | 0.0290 (10) | −0.0088 (9) |
| C6 | 0.0515 (11) | 0.0379 (9) | 0.0421 (10) | −0.0073 (8) | 0.0228 (8) | 0.0004 (7) |
| Cl1 | 0.0550 (4) | 0.0965 (6) | 0.0777 (5) | 0.0095 (3) | 0.0146 (3) | 0.0200 (4) |
| O1 | 0.0545 (9) | 0.0749 (11) | 0.0602 (10) | 0.0028 (8) | 0.0207 (8) | 0.0171 (8) |
| O2 | 0.0803 (10) | 0.0421 (8) | 0.0640 (9) | −0.0001 (7) | 0.0472 (8) | −0.0018 (6) |
| C7 | 0.0480 (11) | 0.0445 (10) | 0.0471 (11) | −0.0094 (8) | 0.0214 (9) | −0.0046 (8) |
| C8 | 0.0584 (13) | 0.0771 (17) | 0.0549 (13) | 0.0100 (12) | 0.0285 (11) | 0.0064 (12) |
| N1—C6 | 1.461 (2) | C3—C4 | 1.378 (4) |
| N1—H1A | 0.9402 | C3—H3 | 0.9300 |
| N1—H1B | 0.9425 | C4—C5 | 1.396 (3) |
| N1—H1C | 0.9015 | C4—H4 | 0.9300 |
| N2—C5 | 1.385 (3) | C5—C6 | 1.393 (3) |
| N2—H2A | 0.8138 | Cl1—C8 | 1.767 (3) |
| N2—H2B | 0.8747 | O1—C7 | 1.243 (3) |
| C1—C2 | 1.378 (3) | O2—C7 | 1.244 (2) |
| C1—C6 | 1.380 (3) | C7—C8 | 1.509 (3) |
| C1—H1 | 0.9300 | C8—H8A | 0.90 (3) |
| C2—C3 | 1.374 (4) | C8—H8B | 0.99 (4) |
| C2—H2 | 0.9300 | ||
| C6—N1—H1A | 112.9 | C3—C4—C5 | 121.3 (2) |
| C6—N1—H1B | 109.6 | C3—C4—H4 | 119.4 |
| H1A—N1—H1B | 108.6 | C5—C4—H4 | 119.4 |
| C6—N1—H1C | 113.4 | N2—C5—C6 | 121.6 (2) |
| H1A—N1—H1C | 109.2 | N2—C5—C4 | 121.3 (2) |
| H1B—N1—H1C | 102.6 | C6—C5—C4 | 117.1 (2) |
| C5—N2—H2A | 118.7 | C1—C6—C5 | 121.37 (19) |
| C5—N2—H2B | 121.3 | C1—C6—N1 | 119.11 (17) |
| H2A—N2—H2B | 115.2 | C5—C6—N1 | 119.45 (18) |
| C2—C1—C6 | 120.5 (2) | O1—C7—O2 | 125.8 (2) |
| C2—C1—H1 | 119.8 | O1—C7—C8 | 113.63 (18) |
| C6—C1—H1 | 119.8 | O2—C7—C8 | 120.5 (2) |
| C3—C2—C1 | 119.1 (2) | C7—C8—Cl1 | 115.41 (16) |
| C3—C2—H2 | 120.4 | C7—C8—H8A | 107 (2) |
| C1—C2—H2 | 120.4 | Cl1—C8—H8A | 107 (2) |
| C2—C3—C4 | 120.7 (2) | C7—C8—H8B | 107 (2) |
| C2—C3—H3 | 119.7 | Cl1—C8—H8B | 106 (2) |
| C4—C3—H3 | 119.7 | H8A—C8—H8B | 114 (3) |
| C6—C1—C2—C3 | −0.8 (3) | N2—C5—C6—C1 | −178.9 (2) |
| C1—C2—C3—C4 | −0.7 (4) | C4—C5—C6—C1 | −0.9 (3) |
| C2—C3—C4—C5 | 1.5 (4) | N2—C5—C6—N1 | −1.8 (3) |
| C3—C4—C5—N2 | 177.4 (2) | C4—C5—C6—N1 | 176.18 (18) |
| C3—C4—C5—C6 | −0.7 (3) | O1—C7—C8—Cl1 | 174.88 (19) |
| C2—C1—C6—C5 | 1.6 (3) | O2—C7—C8—Cl1 | −7.3 (3) |
| C2—C1—C6—N1 | −175.42 (18) |
| H··· | ||||
| N1—H1C···O2i | 0.90 | 1.88 | 2.777 (2) | 173 |
| N1—H1B···O2ii | 0.94 | 1.82 | 2.763 (2) | 173 |
| N2—H2B···O1 | 0.87 | 2.16 | 3.004 (3) | 163 |
| C4—H4···O1iii | 0.93 | 2.66 | 3.527 (3) | 156 |
| C3—H3···Cl1iv | 0.93 | 3.24 | 3.985 (3) | 138 |
| N2—H2A···N2iii | 0.81 | 2.77 | 3.587 (4) | 179 |
| C8—H8A···Cl1v | 0.90 (3) | 3.10 (3) | 3.878 (3) | 146 (3) |
| C8—H8B···O1vi | 0.99 (4) | 2.71 (4) | 3.491 (4) | 136 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.90 | 1.88 | 2.777 (2) | 173 |
| N1—H1 | 0.94 | 1.82 | 2.763 (2) | 173 |
| N2—H2 | 0.87 | 2.16 | 3.004 (3) | 163 |
| C4—H4⋯O1iii | 0.93 | 2.66 | 3.527 (3) | 156 |
| C3—H3⋯Cl1iv | 0.93 | 3.24 | 3.985 (3) | 138 |
| N2—H2 | 0.81 | 2.77 | 3.587 (4) | 179 |
| C8—H8 | 0.90 (3) | 3.10 (3) | 3.878 (3) | 146 (3) |
| C8—H8 | 0.99 (4) | 2.71 (4) | 3.491 (4) | 136 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .