Literature DB >> 21588248

Amino-(5-{2-[amino-(iminio)meth-yl]hydrazin-1-yl}-3,5-dimethyl-4,5-dihydro-1H-pyrazol-1-yl)methaniminium dinitrate.

Sladjana B Novaković, Mirjana Lalović, Vladimir Divjaković, Ljiljana S Vojinović-Ješić, Valerija I Cešljević.   

Abstract

The reaction of aqueous solutions of amino-guanidine hydrogennitrate and acetyl-acetone produces the title pyrazole salt, C(7)H(18)N(8) (2+)·2NO(3) (-). The crystal structure is stabilized by a complex N-H⋯O hydrogen-bonding network. The difference in the engagement of the two nitrate anions in hydrogen bonding is reflected in the variation of the corresponding N-O bond lengths.

Entities:  

Year:  2010        PMID: 21588248      PMCID: PMC3007255          DOI: 10.1107/S1600536810025006

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of pyrazole derivatives, see: Farag et al. (2008 ▶); Stauffer et al. (2000 ▶). For the coordination chemistry of pyrazole derivatives, see: Mukherjee (2000 ▶); Mani (1992 ▶). For related structures, see: Cousson et al. (1991a ▶,b ▶); Kettmann & Světlík (2002 ▶); Khudoyarov et al. (1995 ▶). For hydrogen-bonding motifs, see: Bernstein et al. (1995 ▶); Etter et al. (1990 ▶). Thiele & Dralle (1898 ▶) reported that the reaction of aqueous amino­guanidine hydrogennitrate and acetyl­acetone solutions led to the formation of acetyl­acetonebis(amino­guanidine) dihydrogendinitrate (C7H16N8·2HNO3). However, our investigations of the crystal and molecular structure of the obtained product have shown that this reaction did not form the cited Schiff base but a cyclic product of the same chemical composition.

Experimental

Crystal data

C7H18N8 2+·2NO3 − M = 338.31 Orthorhombic, a = 7.5025 (2) Å b = 13.8946 (4) Å c = 14.2477 (3) Å V = 1485.24 (7) Å3 Z = 4 Mo Kα radiation μ = 0.13 mm−1 T = 293 K 0.42 × 0.35 × 0.26 mm

Data collection

Oxford Diffraction Xcalibur Sapphire3 (Gemini Mo) diffractometer 4760 measured reflections 1997 independent reflections 1548 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.114 S = 1.03 1997 reflections 210 parameters H-atom parameters constrained Δρmax = 0.42 e Å−3 Δρmin = −0.33 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶), PLATON (Spek, 2009 ▶) and PARST (Nardelli, 1983 ▶, 1995 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810025006/dn2584sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810025006/dn2584Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H18N82+·2NO3F(000) = 712
Mr = 338.31Dx = 1.513 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 2501 reflections
a = 7.5025 (2) Åθ = 3.1–29.1°
b = 13.8946 (4) ŵ = 0.13 mm1
c = 14.2477 (3) ÅT = 293 K
V = 1485.24 (7) Å3Prism, white
Z = 40.42 × 0.35 × 0.26 mm
Oxford Diffraction Xcalibur Sapphire3 (Gemini Mo) diffractometer1548 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.017
graphiteθmax = 29.2°, θmin = 3.1°
Detector resolution: 16.3280 pixels mm-1h = −10→7
ω scansk = −16→17
4760 measured reflectionsl = −19→19
1997 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0719P)2] where P = (Fo2 + 2Fc2)/3
1997 reflections(Δ/σ)max < 0.001
210 parametersΔρmax = 0.42 e Å3
0 restraintsΔρmin = −0.33 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.6023 (3)0.23138 (16)0.72769 (15)0.0309 (5)
N20.5967 (3)0.19338 (16)0.63655 (16)0.0322 (5)
N30.6670 (3)0.39564 (15)0.76413 (15)0.0296 (5)
H30.68550.42550.81610.036*
N40.5571 (3)0.43172 (16)0.69281 (15)0.0312 (5)
H40.59440.43490.63590.037*
N50.3293 (3)0.44897 (18)0.79956 (16)0.0382 (6)
H5A0.22280.46760.81270.046*
H5B0.39380.42220.84210.046*
N60.2960 (3)0.50226 (18)0.64889 (17)0.0412 (6)
H6A0.18940.52120.66110.049*
H6B0.33940.51000.59350.049*
N70.3393 (3)0.15173 (18)0.75060 (18)0.0427 (6)
H7A0.25240.13390.78600.051*
H7B0.34230.13410.69280.051*
N80.4640 (3)0.23279 (18)0.87330 (18)0.0410 (6)
H8A0.37730.21510.90880.049*
H8B0.54810.26810.89560.049*
C10.7481 (3)0.30221 (18)0.74174 (19)0.0283 (5)
C20.8406 (4)0.2956 (2)0.6454 (2)0.0340 (6)
H2A0.84510.35810.61520.041*
H2B0.96100.27100.65170.041*
C30.7278 (4)0.22799 (19)0.59131 (19)0.0318 (6)
C40.7588 (5)0.2006 (2)0.4917 (2)0.0477 (8)
H4A0.67620.15110.47400.071*
H4B0.87840.17720.48460.071*
H4C0.74180.25590.45230.071*
C50.4681 (3)0.20601 (18)0.78507 (19)0.0306 (6)
C60.8751 (4)0.2760 (2)0.8205 (2)0.0426 (7)
H6C0.97660.31810.81880.064*
H6D0.91390.21060.81290.064*
H6E0.81530.28280.87970.064*
C70.3929 (3)0.46119 (18)0.71523 (17)0.0268 (5)
N90.0699 (3)0.09061 (19)0.95468 (15)0.0364 (6)
O10.0933 (3)0.05303 (16)0.87444 (13)0.0442 (5)
O20.1651 (3)0.15852 (17)0.97976 (16)0.0521 (6)
N10−0.0557 (4)0.52379 (19)0.92350 (18)0.0418 (6)
O3−0.0469 (3)0.0598 (3)1.00527 (15)0.0752 (9)
O40.0522 (4)0.4704 (3)0.9632 (2)0.0828 (9)
O5−0.0419 (3)0.52961 (19)0.83639 (16)0.0562 (6)
O6−0.1669 (5)0.5670 (2)0.9663 (3)0.1010 (12)
U11U22U33U12U13U23
N10.0339 (11)0.0319 (11)0.0268 (10)−0.0079 (10)0.0053 (10)−0.0029 (10)
N20.0347 (11)0.0323 (11)0.0295 (10)−0.0007 (10)−0.0011 (11)−0.0039 (10)
N30.0314 (11)0.0302 (11)0.0273 (10)0.0030 (10)−0.0032 (10)−0.0059 (10)
N40.0311 (12)0.0389 (12)0.0238 (9)0.0040 (11)0.0021 (10)0.0021 (10)
N50.0331 (11)0.0514 (15)0.0302 (10)0.0120 (12)0.0026 (11)0.0029 (12)
N60.0418 (14)0.0496 (14)0.0323 (12)0.0167 (13)−0.0042 (10)0.0003 (12)
N70.0363 (12)0.0479 (13)0.0440 (14)−0.0148 (12)0.0069 (12)0.0011 (13)
N80.0413 (13)0.0484 (14)0.0334 (12)−0.0106 (12)0.0098 (12)0.0002 (12)
C10.0249 (12)0.0282 (11)0.0318 (13)−0.0012 (11)−0.0016 (11)−0.0002 (12)
C20.0293 (13)0.0360 (14)0.0365 (14)0.0026 (12)0.0068 (12)−0.0006 (13)
C30.0342 (14)0.0291 (12)0.0320 (13)0.0052 (12)0.0005 (12)−0.0022 (12)
C40.0491 (17)0.0572 (19)0.0367 (15)0.0090 (17)0.0088 (15)−0.0050 (16)
C50.0320 (13)0.0259 (12)0.0338 (13)0.0012 (11)0.0035 (12)0.0037 (11)
C60.0338 (15)0.0535 (18)0.0403 (16)0.0079 (15)−0.0081 (13)0.0023 (15)
C70.0272 (12)0.0267 (12)0.0265 (11)0.0001 (11)−0.0026 (11)−0.0047 (10)
N90.0317 (12)0.0526 (15)0.0249 (10)−0.0043 (12)0.0015 (11)−0.0007 (11)
O10.0482 (11)0.0567 (13)0.0277 (9)−0.0101 (11)0.0064 (10)−0.0083 (10)
O20.0543 (13)0.0573 (13)0.0448 (12)−0.0216 (12)0.0073 (11)−0.0166 (12)
N100.0405 (14)0.0442 (15)0.0405 (13)−0.0054 (13)−0.0008 (12)−0.0085 (12)
O30.0620 (15)0.130 (3)0.0335 (11)−0.0500 (18)0.0185 (12)−0.0166 (15)
O40.094 (2)0.097 (2)0.0578 (15)0.012 (2)−0.0325 (17)0.0030 (16)
O50.0557 (14)0.0699 (15)0.0430 (11)−0.0017 (14)−0.0097 (11)0.0007 (12)
O60.092 (2)0.0797 (19)0.131 (3)0.007 (2)0.061 (2)−0.035 (2)
N1—C51.344 (3)N8—H8B0.8605
N1—N21.403 (3)C1—C61.517 (4)
N1—C11.485 (3)C1—C21.541 (4)
N2—C31.271 (4)C2—C31.480 (4)
N3—N41.402 (3)C2—H2A0.9700
N3—C11.469 (3)C2—H2B0.9700
N3—H30.8601C3—C41.488 (4)
N4—C71.336 (3)C4—H4A0.9600
N4—H40.8593C4—H4B0.9600
N5—C71.304 (3)C4—H4C0.9600
N5—H5A0.8606C6—H6C0.9600
N5—H5B0.8597C6—H6D0.9600
N6—C71.322 (3)C6—H6E0.9600
N6—H6A0.8597N9—O31.212 (3)
N6—H6B0.8606N9—O21.236 (3)
N7—C51.320 (4)N9—O11.269 (3)
N7—H7A0.8605N10—O61.195 (4)
N7—H7B0.8594N10—O41.235 (4)
N8—C51.311 (4)N10—O51.248 (3)
N8—H8A0.8597
C5—N1—N2116.2 (2)C3—C2—H2B110.9
C5—N1—C1130.1 (2)C1—C2—H2B110.9
N2—N1—C1113.4 (2)H2A—C2—H2B109.0
C3—N2—N1107.7 (2)N2—C3—C2114.8 (2)
N4—N3—C1113.7 (2)N2—C3—C4120.5 (3)
N4—N3—H3123.2C2—C3—C4124.7 (3)
C1—N3—H3123.1C3—C4—H4A109.5
C7—N4—N3118.6 (2)C3—C4—H4B109.5
C7—N4—H4120.7H4A—C4—H4B109.5
N3—N4—H4120.7C3—C4—H4C109.5
C7—N5—H5A120.0H4A—C4—H4C109.5
C7—N5—H5B120.0H4B—C4—H4C109.5
H5A—N5—H5B120.0N8—C5—N7120.1 (3)
C7—N6—H6A120.0N8—C5—N1121.7 (3)
C7—N6—H6B120.1N7—C5—N1118.2 (2)
H6A—N6—H6B120.0C1—C6—H6C109.5
C5—N7—H7A120.0C1—C6—H6D109.5
C5—N7—H7B120.0H6C—C6—H6D109.5
H7A—N7—H7B120.0C1—C6—H6E109.5
C5—N8—H8A120.0H6C—C6—H6E109.5
C5—N8—H8B119.9H6D—C6—H6E109.5
H8A—N8—H8B120.0N5—C7—N6120.9 (2)
N3—C1—N1108.1 (2)N5—C7—N4121.2 (2)
N3—C1—C6108.1 (2)N6—C7—N4117.9 (2)
N1—C1—C6113.8 (2)O3—N9—O2121.0 (3)
N3—C1—C2115.6 (2)O3—N9—O1119.3 (3)
N1—C1—C299.90 (19)O2—N9—O1119.6 (2)
C6—C1—C2111.2 (2)O6—N10—O4121.7 (3)
C3—C2—C1104.1 (2)O6—N10—O5122.2 (3)
C3—C2—H2A110.9O4—N10—O5116.1 (3)
C1—C2—H2A110.9
C5—N1—N2—C3177.1 (2)N1—C1—C2—C33.4 (2)
C1—N1—N2—C33.2 (3)C6—C1—C2—C3123.9 (2)
C1—N3—N4—C7129.5 (2)N1—N2—C3—C2−0.6 (3)
N4—N3—C1—N1−61.2 (3)N1—N2—C3—C4179.7 (2)
N4—N3—C1—C6175.2 (2)C1—C2—C3—N2−1.9 (3)
N4—N3—C1—C249.7 (3)C1—C2—C3—C4177.7 (3)
C5—N1—C1—N3−55.7 (3)N2—N1—C5—N8176.2 (2)
N2—N1—C1—N3117.2 (2)C1—N1—C5—N8−11.1 (4)
C5—N1—C1—C664.4 (4)N2—N1—C5—N7−2.9 (4)
N2—N1—C1—C6−122.7 (3)C1—N1—C5—N7169.8 (2)
C5—N1—C1—C2−176.9 (3)N3—N4—C7—N5−6.1 (4)
N2—N1—C1—C2−4.1 (3)N3—N4—C7—N6174.6 (2)
N3—C1—C2—C3−112.3 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3···O5i0.862.523.048 (3)120
N4—H4···O6ii0.862.483.331 (5)173
N5—H5A···O40.862.503.138 (4)132
N5—H5A···O50.862.193.048 (4)174
N5—H5B···O3iii0.862.232.934 (3)139
N6—H6A···O1iv0.862.223.022 (3)154
N6—H6B···O4ii0.862.042.905 (4)179
N7—H7A···O10.862.072.899 (3)162
N8—H8A···O20.862.042.897 (3)172
N8—H8B···O2iii0.862.232.990 (3)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3⋯O5i0.862.523.048 (3)120
N4—H4⋯O6ii0.862.483.331 (5)173
N5—H5A⋯O40.862.503.138 (4)132
N5—H5A⋯O50.862.193.048 (4)174
N5—H5B⋯O3iii0.862.232.934 (3)139
N6—H6A⋯O1iv0.862.223.022 (3)154
N6—H6B⋯O4ii0.862.042.905 (4)179
N7—H7A⋯O10.862.072.899 (3)162
N8—H8A⋯O20.862.042.897 (3)172
N8—H8B⋯O2iii0.862.232.990 (3)148

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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