Literature DB >> 21588195

Tetra-aqua-(1,10-phenanthroline-κN,N')cadmium(II) sulfate dihydrate.

Yuan-Yuan Zhang, Qiong-Hua Jin, Wei Yang, Cun-Lin Zhang.   

Abstract

In the title mononuclear complex, [Cd(C(12)n class="Species">H(8)N(2))(H(2)O)(4)]SO(4)·2H(2)O, the coordination geometry around the Cd(II) atom is a distorted octa-hedron, with two aqua ligands occupying the axial positions. Inter-molecular O-H⋯O hydrogen bonds lead to the formation of a two-dimensional layer structure parallel to (001). The layers are connected by π-π inter-actions between the pyridyl and benzene rings of the phenanthroline ligands [centroid-centroid distances = 3.591 (1) and 3.610 (1) Å].

Entities:  

Year:  2010        PMID: 21588195      PMCID: PMC3007401          DOI: 10.1107/S1600536810028175

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general backgound to supra­molecular structures with coordination frameworks, see: Bie et al. (2006 ▶); Huang et al. (2010 ▶); Wu et al. (2009 ▶). For related structures, see: Li et al. (2003 ▶); Zheng & Lin (2003 ▶).

Experimental

Crystal data

[Cd(C12n class="Species">H8N2)(H2O)4]SO4·2H2O M = 496.78 Orthorhombic, a = 8.8398 (9) Å b = 18.6996 (19) Å c = 22.349 (2) Å V = 3694.3 (6) Å3 Z = 8 Mo Kα radiation μ = 1.35 mm−1 T = 298 K 0.41 × 0.30 × 0.27 mm

Data collection

Bruker APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.622, T max = 0.695 17188 measured reflections 3266 independent reflections 2789 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.065 S = 1.16 3266 reflections 236 parameters H-atom parameters constrained Δρmax = 0.52 e Å−3 Δρmin = −0.46 e Å−3 Data collection: SMART (Bruker, 2007 ▶); cell refinement: SAINT-Plus (Bruker, 2007 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810028175/hy2328sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810028175/hy2328Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cd(C12H8N2)(H2O)4]SO4·2H2OF(000) = 2000.0
Mr = 496.78Dx = 1.786 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 8439 reflections
a = 8.8398 (9) Åθ = 2.2–28.1°
b = 18.6996 (19) ŵ = 1.35 mm1
c = 22.349 (2) ÅT = 298 K
V = 3694.3 (6) Å3Block, yellow
Z = 80.41 × 0.30 × 0.27 mm
Bruker APEX CCD diffractometer3266 independent reflections
Radiation source: fine-focus sealed tube2789 reflections with I > 2σ(I)
graphiteRint = 0.045
φ and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −10→7
Tmin = 0.622, Tmax = 0.695k = −22→22
17188 measured reflectionsl = −22→26
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H-atom parameters constrained
wR(F2) = 0.065w = 1/[σ2(Fo2) + (0.0047P)2 + 7.3452P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max = 0.001
3266 reflectionsΔρmax = 0.52 e Å3
236 parametersΔρmin = −0.46 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.00446 (16)
xyzUiso*/Ueq
Cd10.63465 (3)0.587420 (13)0.411381 (11)0.03164 (12)
N10.7363 (4)0.52699 (16)0.33033 (14)0.0367 (7)
N20.5467 (4)0.64254 (17)0.32424 (14)0.0379 (8)
O10.4794 (3)0.49034 (13)0.42568 (12)0.0433 (7)
H1A0.51210.45050.41270.052*
H1B0.41100.48280.45160.052*
O20.7916 (3)0.68309 (13)0.42330 (11)0.0392 (6)
H2A0.75080.72410.42020.047*
H2B0.86380.68580.44830.047*
O30.4697 (3)0.64814 (14)0.46954 (13)0.0505 (8)
H3A0.48560.69210.47690.061*
H3B0.37760.63930.47750.061*
O40.7684 (3)0.53557 (13)0.48847 (12)0.0433 (7)
H4A0.78850.49110.48800.052*
H4B0.84290.55790.50370.052*
O50.8325 (3)0.31356 (13)0.41435 (12)0.0445 (7)
O61.0491 (3)0.38259 (15)0.44410 (13)0.0500 (8)
O70.8156 (3)0.39447 (14)0.49742 (14)0.0517 (8)
O80.9605 (3)0.28672 (13)0.50624 (13)0.0489 (8)
O90.9479 (3)0.86732 (14)0.37107 (13)0.0499 (8)
H9A0.86840.84710.38420.060*
H9B1.02410.84360.38300.060*
O100.7963 (3)0.20834 (17)0.59585 (14)0.0601 (8)
H10A0.82540.23390.56660.072*
H10B0.73030.17910.58290.072*
S10.91417 (11)0.34438 (4)0.46528 (4)0.0313 (2)
C10.8259 (5)0.4706 (2)0.3331 (2)0.0528 (12)
H10.85770.45450.37040.063*
C20.8748 (6)0.4343 (3)0.2817 (3)0.0679 (15)
H20.93620.39410.28500.082*
C30.8315 (6)0.4584 (3)0.2274 (3)0.0711 (16)
H30.86400.43480.19310.085*
C40.7386 (5)0.5184 (3)0.22216 (19)0.0513 (12)
C50.6928 (4)0.5516 (2)0.27550 (16)0.0370 (9)
C60.5959 (4)0.6128 (2)0.27248 (16)0.0361 (9)
C70.5517 (5)0.6411 (3)0.21632 (18)0.0500 (12)
C80.4601 (6)0.7016 (3)0.2162 (2)0.0628 (14)
H80.43070.72180.18000.075*
C90.4140 (6)0.7310 (3)0.2677 (2)0.0643 (14)
H90.35340.77160.26760.077*
C100.4585 (5)0.6996 (2)0.3217 (2)0.0508 (11)
H100.42460.71970.35740.061*
C110.6927 (6)0.5484 (3)0.1662 (2)0.0679 (15)
H110.72450.52690.13080.081*
C120.6042 (6)0.6069 (3)0.1636 (2)0.0663 (15)
H120.57700.62540.12650.080*
U11U22U33U12U13U23
Cd10.03948 (18)0.02569 (15)0.02976 (16)0.00082 (12)0.00038 (12)−0.00058 (12)
N10.0370 (18)0.0301 (17)0.0429 (19)−0.0027 (15)0.0088 (15)−0.0022 (14)
N20.040 (2)0.0347 (18)0.0389 (18)−0.0004 (15)−0.0040 (16)0.0039 (14)
O10.0472 (17)0.0317 (14)0.0510 (17)−0.0061 (13)0.0075 (14)−0.0014 (12)
O20.0394 (15)0.0253 (13)0.0530 (17)0.0024 (12)−0.0097 (13)−0.0017 (12)
O30.0479 (18)0.0342 (15)0.069 (2)−0.0064 (13)0.0238 (15)−0.0175 (14)
O40.0484 (17)0.0236 (13)0.0579 (17)0.0007 (12)−0.0196 (14)0.0005 (12)
O50.0478 (17)0.0312 (14)0.0545 (17)−0.0085 (13)−0.0188 (14)0.0023 (13)
O60.0409 (17)0.0461 (17)0.0632 (19)−0.0136 (14)0.0002 (15)−0.0023 (14)
O70.0480 (18)0.0301 (15)0.077 (2)0.0033 (13)0.0094 (16)−0.0063 (14)
O80.0584 (19)0.0302 (15)0.0580 (18)0.0041 (13)−0.0206 (15)0.0032 (13)
O90.0431 (17)0.0403 (16)0.066 (2)0.0016 (14)0.0109 (15)0.0069 (14)
O100.0499 (19)0.061 (2)0.070 (2)0.0017 (16)−0.0032 (17)−0.0018 (16)
S10.0291 (5)0.0196 (4)0.0451 (5)−0.0003 (4)−0.0060 (4)−0.0012 (4)
C10.050 (3)0.041 (2)0.067 (3)0.003 (2)0.015 (2)0.000 (2)
C20.062 (3)0.052 (3)0.090 (4)0.009 (3)0.026 (3)−0.018 (3)
C30.067 (4)0.077 (4)0.069 (4)−0.006 (3)0.026 (3)−0.027 (3)
C40.046 (3)0.062 (3)0.046 (3)−0.015 (2)0.016 (2)−0.013 (2)
C50.032 (2)0.045 (2)0.035 (2)−0.0137 (18)0.0064 (17)−0.0060 (17)
C60.032 (2)0.043 (2)0.034 (2)−0.0137 (18)0.0001 (17)0.0022 (17)
C70.044 (3)0.068 (3)0.038 (2)−0.023 (2)−0.004 (2)0.007 (2)
C80.056 (3)0.073 (3)0.060 (3)−0.014 (3)−0.019 (3)0.026 (3)
C90.061 (3)0.058 (3)0.074 (4)−0.003 (3)−0.020 (3)0.015 (3)
C100.051 (3)0.045 (3)0.056 (3)0.003 (2)−0.008 (2)0.004 (2)
C110.066 (3)0.101 (4)0.036 (3)−0.019 (3)0.013 (2)−0.013 (3)
C120.062 (3)0.101 (4)0.036 (3)−0.020 (3)−0.001 (2)0.007 (3)
Cd1—O32.260 (3)O9—H9B0.8500
Cd1—O22.280 (2)O10—H10A0.8500
Cd1—O12.298 (3)O10—H10B0.8500
Cd1—O42.304 (2)C1—C21.403 (6)
Cd1—N12.317 (3)C1—H10.9300
Cd1—N22.337 (3)C2—C31.350 (7)
N1—C11.320 (5)C2—H20.9300
N1—C51.364 (5)C3—C41.396 (7)
N2—C101.323 (5)C3—H30.9300
N2—C61.355 (5)C4—C51.403 (5)
O1—H1A0.8500C4—C111.429 (7)
O1—H1B0.8499C5—C61.432 (6)
O2—H2A0.8499C6—C71.417 (5)
O2—H2B0.8500C7—C81.392 (7)
O3—H3A0.8500C7—C121.418 (7)
O3—H3B0.8500C8—C91.340 (7)
O4—H4A0.8500C8—H80.9300
O4—H4B0.8500C9—C101.398 (6)
O5—S11.466 (3)C9—H90.9300
O6—S11.469 (3)C10—H100.9300
O7—S11.467 (3)C11—C121.347 (7)
O8—S11.473 (3)C11—H110.9300
O9—H9A0.8500C12—H120.9300
O3—Cd1—O286.06 (9)O7—S1—O8109.16 (18)
O3—Cd1—O186.08 (10)O6—S1—O8109.31 (18)
O2—Cd1—O1165.28 (9)N1—C1—C2122.2 (5)
O3—Cd1—O496.46 (11)N1—C1—H1118.9
O2—Cd1—O486.02 (9)C2—C1—H1118.9
O1—Cd1—O482.52 (9)C3—C2—C1119.1 (5)
O3—Cd1—N1160.98 (12)C3—C2—H2120.4
O2—Cd1—N1103.77 (10)C1—C2—H2120.4
O1—Cd1—N187.42 (10)C2—C3—C4120.8 (5)
O4—Cd1—N1100.39 (10)C2—C3—H3119.6
O3—Cd1—N292.46 (11)C4—C3—H3119.6
O2—Cd1—N287.35 (10)C3—C4—C5116.9 (4)
O1—Cd1—N2105.41 (10)C3—C4—C11123.8 (5)
O4—Cd1—N2168.48 (11)C5—C4—C11119.3 (5)
N1—Cd1—N272.09 (11)N1—C5—C4122.2 (4)
C1—N1—C5118.7 (4)N1—C5—C6118.7 (3)
C1—N1—Cd1125.8 (3)C4—C5—C6119.0 (4)
C5—N1—Cd1115.4 (2)N2—C6—C7120.9 (4)
C10—N2—C6119.0 (3)N2—C6—C5118.7 (3)
C10—N2—Cd1126.0 (3)C7—C6—C5120.4 (4)
C6—N2—Cd1115.0 (2)C8—C7—C6117.8 (4)
Cd1—O1—H1A116.2C8—C7—C12123.7 (5)
Cd1—O1—H1B130.6C6—C7—C12118.5 (5)
H1A—O1—H1B109.3C9—C8—C7120.5 (4)
Cd1—O2—H2A116.1C9—C8—H8119.7
Cd1—O2—H2B125.5C7—C8—H8119.7
H2A—O2—H2B108.6C8—C9—C10119.0 (5)
Cd1—O3—H3A119.4C8—C9—H9120.5
Cd1—O3—H3B129.9C10—C9—H9120.5
H3A—O3—H3B107.8N2—C10—C9122.7 (5)
Cd1—O4—H4A120.7N2—C10—H10118.6
Cd1—O4—H4B119.3C9—C10—H10118.6
H4A—O4—H4B108.8C12—C11—C4121.4 (5)
H9A—O9—H9B108.3C12—C11—H11119.3
H10A—O10—H10B107.9C4—C11—H11119.3
O5—S1—O7109.79 (17)C11—C12—C7121.3 (5)
O5—S1—O6109.95 (17)C11—C12—H12119.3
O7—S1—O6109.24 (17)C7—C12—H12119.3
O5—S1—O8109.38 (15)
O3—Cd1—N1—C1−141.9 (4)Cd1—N1—C5—C62.5 (4)
O2—Cd1—N1—C198.5 (3)C3—C4—C5—N10.1 (6)
O1—Cd1—N1—C1−71.8 (3)C11—C4—C5—N1−178.0 (4)
O4—Cd1—N1—C110.1 (3)C3—C4—C5—C6−179.2 (4)
N2—Cd1—N1—C1−178.9 (3)C11—C4—C5—C62.7 (6)
O3—Cd1—N1—C535.5 (5)C10—N2—C6—C7−1.2 (6)
O2—Cd1—N1—C5−84.1 (3)Cd1—N2—C6—C7−179.7 (3)
O1—Cd1—N1—C5105.6 (3)C10—N2—C6—C5179.2 (3)
O4—Cd1—N1—C5−172.5 (2)Cd1—N2—C6—C50.7 (4)
N2—Cd1—N1—C5−1.5 (2)N1—C5—C6—N2−2.2 (5)
O3—Cd1—N2—C1013.4 (3)C4—C5—C6—N2177.1 (4)
O2—Cd1—N2—C10−72.6 (3)N1—C5—C6—C7178.2 (3)
O1—Cd1—N2—C10100.0 (3)C4—C5—C6—C7−2.5 (5)
O4—Cd1—N2—C10−127.4 (5)N2—C6—C7—C81.9 (6)
N1—Cd1—N2—C10−178.0 (4)C5—C6—C7—C8−178.6 (4)
O3—Cd1—N2—C6−168.3 (3)N2—C6—C7—C12−178.8 (4)
O2—Cd1—N2—C6105.8 (3)C5—C6—C7—C120.7 (6)
O1—Cd1—N2—C6−81.6 (3)C6—C7—C8—C9−1.0 (7)
O4—Cd1—N2—C650.9 (6)C12—C7—C8—C9179.7 (5)
N1—Cd1—N2—C60.4 (2)C7—C8—C9—C10−0.4 (7)
C5—N1—C1—C2−1.6 (6)C6—N2—C10—C9−0.3 (6)
Cd1—N1—C1—C2175.7 (3)Cd1—N2—C10—C9178.0 (3)
N1—C1—C2—C31.4 (8)C8—C9—C10—N21.2 (7)
C1—C2—C3—C4−0.4 (8)C3—C4—C11—C12−179.2 (5)
C2—C3—C4—C5−0.3 (7)C5—C4—C11—C12−1.2 (7)
C2—C3—C4—C11177.8 (5)C4—C11—C12—C7−0.6 (8)
C1—N1—C5—C40.8 (6)C8—C7—C12—C11−180.0 (5)
Cd1—N1—C5—C4−176.8 (3)C6—C7—C12—C110.8 (7)
C1—N1—C5—C6−179.9 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1A···O9i0.851.852.682 (4)167
O1—H1B···O4ii0.852.102.952 (4)176
O2—H2A···O5iii0.851.832.682 (3)178
O2—H2B···O8iv0.851.932.757 (4)165
O3—H3A···O8iii0.851.952.787 (4)170
O3—H3B···O7ii0.851.902.746 (4)170
O4—H4A···O70.851.842.679 (4)171
O4—H4B···O6iv0.851.872.686 (4)159
O9—H9A···O5iii0.852.002.844 (4)172
O9—H9B···O10iv0.851.922.768 (4)176
O10—H10A···O80.852.052.875 (4)162
O10—H10B···O6v0.852.062.909 (4)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1A⋯O9i0.851.852.682 (4)167
O1—H1B⋯O4ii0.852.102.952 (4)176
O2—H2A⋯O5iii0.851.832.682 (3)178
O2—H2B⋯O8iv0.851.932.757 (4)165
O3—H3A⋯O8iii0.851.952.787 (4)170
O3—H3B⋯O7ii0.851.902.746 (4)170
O4—H4A⋯O70.851.842.679 (4)171
O4—H4B⋯O6iv0.851.872.686 (4)159
O9—H9A⋯O5iii0.852.002.844 (4)172
O9—H9B⋯O10iv0.851.922.768 (4)176
O10—H10A⋯O80.852.052.875 (4)162
O10—H10B⋯O6v0.852.062.909 (4)172

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  (1,10-Phenanthroline-κN,N')(triphenyl-phosphine-κP)silver(I) trifluoro-methane-sulfonate.

Authors:  Jie-Qiang Wu; Qiong-Hua Jin; Ke-Yi Hu; Cun-Lin Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-19
  2 in total

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