| Literature DB >> 21588195 |
Yuan-Yuan Zhang, Qiong-Hua Jin, Wei Yang, Cun-Lin Zhang.
Abstract
In the title mononuclear complex, [Cd(C(12)Entities:
Year: 2010 PMID: 21588195 PMCID: PMC3007401 DOI: 10.1107/S1600536810028175
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cd(C12H8N2)(H2O)4]SO4·2H2O | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 8439 reflections |
| θ = 2.2–28.1° | |
| µ = 1.35 mm−1 | |
| Block, yellow | |
| 0.41 × 0.30 × 0.27 mm |
| Bruker APEX CCD diffractometer | 3266 independent reflections |
| Radiation source: fine-focus sealed tube | 2789 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 17188 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3266 reflections | Δρmax = 0.52 e Å−3 |
| 236 parameters | Δρmin = −0.46 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.00446 (16) |
| Cd1 | 0.63465 (3) | 0.587420 (13) | 0.411381 (11) | 0.03164 (12) | |
| N1 | 0.7363 (4) | 0.52699 (16) | 0.33033 (14) | 0.0367 (7) | |
| N2 | 0.5467 (4) | 0.64254 (17) | 0.32424 (14) | 0.0379 (8) | |
| O1 | 0.4794 (3) | 0.49034 (13) | 0.42568 (12) | 0.0433 (7) | |
| H1A | 0.5121 | 0.4505 | 0.4127 | 0.052* | |
| H1B | 0.4110 | 0.4828 | 0.4516 | 0.052* | |
| O2 | 0.7916 (3) | 0.68309 (13) | 0.42330 (11) | 0.0392 (6) | |
| H2A | 0.7508 | 0.7241 | 0.4202 | 0.047* | |
| H2B | 0.8638 | 0.6858 | 0.4483 | 0.047* | |
| O3 | 0.4697 (3) | 0.64814 (14) | 0.46954 (13) | 0.0505 (8) | |
| H3A | 0.4856 | 0.6921 | 0.4769 | 0.061* | |
| H3B | 0.3776 | 0.6393 | 0.4775 | 0.061* | |
| O4 | 0.7684 (3) | 0.53557 (13) | 0.48847 (12) | 0.0433 (7) | |
| H4A | 0.7885 | 0.4911 | 0.4880 | 0.052* | |
| H4B | 0.8429 | 0.5579 | 0.5037 | 0.052* | |
| O5 | 0.8325 (3) | 0.31356 (13) | 0.41435 (12) | 0.0445 (7) | |
| O6 | 1.0491 (3) | 0.38259 (15) | 0.44410 (13) | 0.0500 (8) | |
| O7 | 0.8156 (3) | 0.39447 (14) | 0.49742 (14) | 0.0517 (8) | |
| O8 | 0.9605 (3) | 0.28672 (13) | 0.50624 (13) | 0.0489 (8) | |
| O9 | 0.9479 (3) | 0.86732 (14) | 0.37107 (13) | 0.0499 (8) | |
| H9A | 0.8684 | 0.8471 | 0.3842 | 0.060* | |
| H9B | 1.0241 | 0.8436 | 0.3830 | 0.060* | |
| O10 | 0.7963 (3) | 0.20834 (17) | 0.59585 (14) | 0.0601 (8) | |
| H10A | 0.8254 | 0.2339 | 0.5666 | 0.072* | |
| H10B | 0.7303 | 0.1791 | 0.5829 | 0.072* | |
| S1 | 0.91417 (11) | 0.34438 (4) | 0.46528 (4) | 0.0313 (2) | |
| C1 | 0.8259 (5) | 0.4706 (2) | 0.3331 (2) | 0.0528 (12) | |
| H1 | 0.8577 | 0.4545 | 0.3704 | 0.063* | |
| C2 | 0.8748 (6) | 0.4343 (3) | 0.2817 (3) | 0.0679 (15) | |
| H2 | 0.9362 | 0.3941 | 0.2850 | 0.082* | |
| C3 | 0.8315 (6) | 0.4584 (3) | 0.2274 (3) | 0.0711 (16) | |
| H3 | 0.8640 | 0.4348 | 0.1931 | 0.085* | |
| C4 | 0.7386 (5) | 0.5184 (3) | 0.22216 (19) | 0.0513 (12) | |
| C5 | 0.6928 (4) | 0.5516 (2) | 0.27550 (16) | 0.0370 (9) | |
| C6 | 0.5959 (4) | 0.6128 (2) | 0.27248 (16) | 0.0361 (9) | |
| C7 | 0.5517 (5) | 0.6411 (3) | 0.21632 (18) | 0.0500 (12) | |
| C8 | 0.4601 (6) | 0.7016 (3) | 0.2162 (2) | 0.0628 (14) | |
| H8 | 0.4307 | 0.7218 | 0.1800 | 0.075* | |
| C9 | 0.4140 (6) | 0.7310 (3) | 0.2677 (2) | 0.0643 (14) | |
| H9 | 0.3534 | 0.7716 | 0.2676 | 0.077* | |
| C10 | 0.4585 (5) | 0.6996 (2) | 0.3217 (2) | 0.0508 (11) | |
| H10 | 0.4246 | 0.7197 | 0.3574 | 0.061* | |
| C11 | 0.6927 (6) | 0.5484 (3) | 0.1662 (2) | 0.0679 (15) | |
| H11 | 0.7245 | 0.5269 | 0.1308 | 0.081* | |
| C12 | 0.6042 (6) | 0.6069 (3) | 0.1636 (2) | 0.0663 (15) | |
| H12 | 0.5770 | 0.6254 | 0.1265 | 0.080* |
| Cd1 | 0.03948 (18) | 0.02569 (15) | 0.02976 (16) | 0.00082 (12) | 0.00038 (12) | −0.00058 (12) |
| N1 | 0.0370 (18) | 0.0301 (17) | 0.0429 (19) | −0.0027 (15) | 0.0088 (15) | −0.0022 (14) |
| N2 | 0.040 (2) | 0.0347 (18) | 0.0389 (18) | −0.0004 (15) | −0.0040 (16) | 0.0039 (14) |
| O1 | 0.0472 (17) | 0.0317 (14) | 0.0510 (17) | −0.0061 (13) | 0.0075 (14) | −0.0014 (12) |
| O2 | 0.0394 (15) | 0.0253 (13) | 0.0530 (17) | 0.0024 (12) | −0.0097 (13) | −0.0017 (12) |
| O3 | 0.0479 (18) | 0.0342 (15) | 0.069 (2) | −0.0064 (13) | 0.0238 (15) | −0.0175 (14) |
| O4 | 0.0484 (17) | 0.0236 (13) | 0.0579 (17) | 0.0007 (12) | −0.0196 (14) | 0.0005 (12) |
| O5 | 0.0478 (17) | 0.0312 (14) | 0.0545 (17) | −0.0085 (13) | −0.0188 (14) | 0.0023 (13) |
| O6 | 0.0409 (17) | 0.0461 (17) | 0.0632 (19) | −0.0136 (14) | 0.0002 (15) | −0.0023 (14) |
| O7 | 0.0480 (18) | 0.0301 (15) | 0.077 (2) | 0.0033 (13) | 0.0094 (16) | −0.0063 (14) |
| O8 | 0.0584 (19) | 0.0302 (15) | 0.0580 (18) | 0.0041 (13) | −0.0206 (15) | 0.0032 (13) |
| O9 | 0.0431 (17) | 0.0403 (16) | 0.066 (2) | 0.0016 (14) | 0.0109 (15) | 0.0069 (14) |
| O10 | 0.0499 (19) | 0.061 (2) | 0.070 (2) | 0.0017 (16) | −0.0032 (17) | −0.0018 (16) |
| S1 | 0.0291 (5) | 0.0196 (4) | 0.0451 (5) | −0.0003 (4) | −0.0060 (4) | −0.0012 (4) |
| C1 | 0.050 (3) | 0.041 (2) | 0.067 (3) | 0.003 (2) | 0.015 (2) | 0.000 (2) |
| C2 | 0.062 (3) | 0.052 (3) | 0.090 (4) | 0.009 (3) | 0.026 (3) | −0.018 (3) |
| C3 | 0.067 (4) | 0.077 (4) | 0.069 (4) | −0.006 (3) | 0.026 (3) | −0.027 (3) |
| C4 | 0.046 (3) | 0.062 (3) | 0.046 (3) | −0.015 (2) | 0.016 (2) | −0.013 (2) |
| C5 | 0.032 (2) | 0.045 (2) | 0.035 (2) | −0.0137 (18) | 0.0064 (17) | −0.0060 (17) |
| C6 | 0.032 (2) | 0.043 (2) | 0.034 (2) | −0.0137 (18) | 0.0001 (17) | 0.0022 (17) |
| C7 | 0.044 (3) | 0.068 (3) | 0.038 (2) | −0.023 (2) | −0.004 (2) | 0.007 (2) |
| C8 | 0.056 (3) | 0.073 (3) | 0.060 (3) | −0.014 (3) | −0.019 (3) | 0.026 (3) |
| C9 | 0.061 (3) | 0.058 (3) | 0.074 (4) | −0.003 (3) | −0.020 (3) | 0.015 (3) |
| C10 | 0.051 (3) | 0.045 (3) | 0.056 (3) | 0.003 (2) | −0.008 (2) | 0.004 (2) |
| C11 | 0.066 (3) | 0.101 (4) | 0.036 (3) | −0.019 (3) | 0.013 (2) | −0.013 (3) |
| C12 | 0.062 (3) | 0.101 (4) | 0.036 (3) | −0.020 (3) | −0.001 (2) | 0.007 (3) |
| Cd1—O3 | 2.260 (3) | O9—H9B | 0.8500 |
| Cd1—O2 | 2.280 (2) | O10—H10A | 0.8500 |
| Cd1—O1 | 2.298 (3) | O10—H10B | 0.8500 |
| Cd1—O4 | 2.304 (2) | C1—C2 | 1.403 (6) |
| Cd1—N1 | 2.317 (3) | C1—H1 | 0.9300 |
| Cd1—N2 | 2.337 (3) | C2—C3 | 1.350 (7) |
| N1—C1 | 1.320 (5) | C2—H2 | 0.9300 |
| N1—C5 | 1.364 (5) | C3—C4 | 1.396 (7) |
| N2—C10 | 1.323 (5) | C3—H3 | 0.9300 |
| N2—C6 | 1.355 (5) | C4—C5 | 1.403 (5) |
| O1—H1A | 0.8500 | C4—C11 | 1.429 (7) |
| O1—H1B | 0.8499 | C5—C6 | 1.432 (6) |
| O2—H2A | 0.8499 | C6—C7 | 1.417 (5) |
| O2—H2B | 0.8500 | C7—C8 | 1.392 (7) |
| O3—H3A | 0.8500 | C7—C12 | 1.418 (7) |
| O3—H3B | 0.8500 | C8—C9 | 1.340 (7) |
| O4—H4A | 0.8500 | C8—H8 | 0.9300 |
| O4—H4B | 0.8500 | C9—C10 | 1.398 (6) |
| O5—S1 | 1.466 (3) | C9—H9 | 0.9300 |
| O6—S1 | 1.469 (3) | C10—H10 | 0.9300 |
| O7—S1 | 1.467 (3) | C11—C12 | 1.347 (7) |
| O8—S1 | 1.473 (3) | C11—H11 | 0.9300 |
| O9—H9A | 0.8500 | C12—H12 | 0.9300 |
| O3—Cd1—O2 | 86.06 (9) | O7—S1—O8 | 109.16 (18) |
| O3—Cd1—O1 | 86.08 (10) | O6—S1—O8 | 109.31 (18) |
| O2—Cd1—O1 | 165.28 (9) | N1—C1—C2 | 122.2 (5) |
| O3—Cd1—O4 | 96.46 (11) | N1—C1—H1 | 118.9 |
| O2—Cd1—O4 | 86.02 (9) | C2—C1—H1 | 118.9 |
| O1—Cd1—O4 | 82.52 (9) | C3—C2—C1 | 119.1 (5) |
| O3—Cd1—N1 | 160.98 (12) | C3—C2—H2 | 120.4 |
| O2—Cd1—N1 | 103.77 (10) | C1—C2—H2 | 120.4 |
| O1—Cd1—N1 | 87.42 (10) | C2—C3—C4 | 120.8 (5) |
| O4—Cd1—N1 | 100.39 (10) | C2—C3—H3 | 119.6 |
| O3—Cd1—N2 | 92.46 (11) | C4—C3—H3 | 119.6 |
| O2—Cd1—N2 | 87.35 (10) | C3—C4—C5 | 116.9 (4) |
| O1—Cd1—N2 | 105.41 (10) | C3—C4—C11 | 123.8 (5) |
| O4—Cd1—N2 | 168.48 (11) | C5—C4—C11 | 119.3 (5) |
| N1—Cd1—N2 | 72.09 (11) | N1—C5—C4 | 122.2 (4) |
| C1—N1—C5 | 118.7 (4) | N1—C5—C6 | 118.7 (3) |
| C1—N1—Cd1 | 125.8 (3) | C4—C5—C6 | 119.0 (4) |
| C5—N1—Cd1 | 115.4 (2) | N2—C6—C7 | 120.9 (4) |
| C10—N2—C6 | 119.0 (3) | N2—C6—C5 | 118.7 (3) |
| C10—N2—Cd1 | 126.0 (3) | C7—C6—C5 | 120.4 (4) |
| C6—N2—Cd1 | 115.0 (2) | C8—C7—C6 | 117.8 (4) |
| Cd1—O1—H1A | 116.2 | C8—C7—C12 | 123.7 (5) |
| Cd1—O1—H1B | 130.6 | C6—C7—C12 | 118.5 (5) |
| H1A—O1—H1B | 109.3 | C9—C8—C7 | 120.5 (4) |
| Cd1—O2—H2A | 116.1 | C9—C8—H8 | 119.7 |
| Cd1—O2—H2B | 125.5 | C7—C8—H8 | 119.7 |
| H2A—O2—H2B | 108.6 | C8—C9—C10 | 119.0 (5) |
| Cd1—O3—H3A | 119.4 | C8—C9—H9 | 120.5 |
| Cd1—O3—H3B | 129.9 | C10—C9—H9 | 120.5 |
| H3A—O3—H3B | 107.8 | N2—C10—C9 | 122.7 (5) |
| Cd1—O4—H4A | 120.7 | N2—C10—H10 | 118.6 |
| Cd1—O4—H4B | 119.3 | C9—C10—H10 | 118.6 |
| H4A—O4—H4B | 108.8 | C12—C11—C4 | 121.4 (5) |
| H9A—O9—H9B | 108.3 | C12—C11—H11 | 119.3 |
| H10A—O10—H10B | 107.9 | C4—C11—H11 | 119.3 |
| O5—S1—O7 | 109.79 (17) | C11—C12—C7 | 121.3 (5) |
| O5—S1—O6 | 109.95 (17) | C11—C12—H12 | 119.3 |
| O7—S1—O6 | 109.24 (17) | C7—C12—H12 | 119.3 |
| O5—S1—O8 | 109.38 (15) | ||
| O3—Cd1—N1—C1 | −141.9 (4) | Cd1—N1—C5—C6 | 2.5 (4) |
| O2—Cd1—N1—C1 | 98.5 (3) | C3—C4—C5—N1 | 0.1 (6) |
| O1—Cd1—N1—C1 | −71.8 (3) | C11—C4—C5—N1 | −178.0 (4) |
| O4—Cd1—N1—C1 | 10.1 (3) | C3—C4—C5—C6 | −179.2 (4) |
| N2—Cd1—N1—C1 | −178.9 (3) | C11—C4—C5—C6 | 2.7 (6) |
| O3—Cd1—N1—C5 | 35.5 (5) | C10—N2—C6—C7 | −1.2 (6) |
| O2—Cd1—N1—C5 | −84.1 (3) | Cd1—N2—C6—C7 | −179.7 (3) |
| O1—Cd1—N1—C5 | 105.6 (3) | C10—N2—C6—C5 | 179.2 (3) |
| O4—Cd1—N1—C5 | −172.5 (2) | Cd1—N2—C6—C5 | 0.7 (4) |
| N2—Cd1—N1—C5 | −1.5 (2) | N1—C5—C6—N2 | −2.2 (5) |
| O3—Cd1—N2—C10 | 13.4 (3) | C4—C5—C6—N2 | 177.1 (4) |
| O2—Cd1—N2—C10 | −72.6 (3) | N1—C5—C6—C7 | 178.2 (3) |
| O1—Cd1—N2—C10 | 100.0 (3) | C4—C5—C6—C7 | −2.5 (5) |
| O4—Cd1—N2—C10 | −127.4 (5) | N2—C6—C7—C8 | 1.9 (6) |
| N1—Cd1—N2—C10 | −178.0 (4) | C5—C6—C7—C8 | −178.6 (4) |
| O3—Cd1—N2—C6 | −168.3 (3) | N2—C6—C7—C12 | −178.8 (4) |
| O2—Cd1—N2—C6 | 105.8 (3) | C5—C6—C7—C12 | 0.7 (6) |
| O1—Cd1—N2—C6 | −81.6 (3) | C6—C7—C8—C9 | −1.0 (7) |
| O4—Cd1—N2—C6 | 50.9 (6) | C12—C7—C8—C9 | 179.7 (5) |
| N1—Cd1—N2—C6 | 0.4 (2) | C7—C8—C9—C10 | −0.4 (7) |
| C5—N1—C1—C2 | −1.6 (6) | C6—N2—C10—C9 | −0.3 (6) |
| Cd1—N1—C1—C2 | 175.7 (3) | Cd1—N2—C10—C9 | 178.0 (3) |
| N1—C1—C2—C3 | 1.4 (8) | C8—C9—C10—N2 | 1.2 (7) |
| C1—C2—C3—C4 | −0.4 (8) | C3—C4—C11—C12 | −179.2 (5) |
| C2—C3—C4—C5 | −0.3 (7) | C5—C4—C11—C12 | −1.2 (7) |
| C2—C3—C4—C11 | 177.8 (5) | C4—C11—C12—C7 | −0.6 (8) |
| C1—N1—C5—C4 | 0.8 (6) | C8—C7—C12—C11 | −180.0 (5) |
| Cd1—N1—C5—C4 | −176.8 (3) | C6—C7—C12—C11 | 0.8 (7) |
| C1—N1—C5—C6 | −179.9 (3) |
| H··· | ||||
| O1—H1A···O9i | 0.85 | 1.85 | 2.682 (4) | 167 |
| O1—H1B···O4ii | 0.85 | 2.10 | 2.952 (4) | 176 |
| O2—H2A···O5iii | 0.85 | 1.83 | 2.682 (3) | 178 |
| O2—H2B···O8iv | 0.85 | 1.93 | 2.757 (4) | 165 |
| O3—H3A···O8iii | 0.85 | 1.95 | 2.787 (4) | 170 |
| O3—H3B···O7ii | 0.85 | 1.90 | 2.746 (4) | 170 |
| O4—H4A···O7 | 0.85 | 1.84 | 2.679 (4) | 171 |
| O4—H4B···O6iv | 0.85 | 1.87 | 2.686 (4) | 159 |
| O9—H9A···O5iii | 0.85 | 2.00 | 2.844 (4) | 172 |
| O9—H9B···O10iv | 0.85 | 1.92 | 2.768 (4) | 176 |
| O10—H10A···O8 | 0.85 | 2.05 | 2.875 (4) | 162 |
| O10—H10B···O6v | 0.85 | 2.06 | 2.909 (4) | 172 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.85 | 1.85 | 2.682 (4) | 167 |
| O1—H1 | 0.85 | 2.10 | 2.952 (4) | 176 |
| O2—H2 | 0.85 | 1.83 | 2.682 (3) | 178 |
| O2—H2 | 0.85 | 1.93 | 2.757 (4) | 165 |
| O3—H3 | 0.85 | 1.95 | 2.787 (4) | 170 |
| O3—H3 | 0.85 | 1.90 | 2.746 (4) | 170 |
| O4—H4 | 0.85 | 1.84 | 2.679 (4) | 171 |
| O4—H4 | 0.85 | 1.87 | 2.686 (4) | 159 |
| O9—H9 | 0.85 | 2.00 | 2.844 (4) | 172 |
| O9—H9 | 0.85 | 1.92 | 2.768 (4) | 176 |
| O10—H10 | 0.85 | 2.05 | 2.875 (4) | 162 |
| O10—H10 | 0.85 | 2.06 | 2.909 (4) | 172 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .