Literature DB >> 21588166

μ-Adipato-bis-[chlorido(2,2':6',2''-terpyridine)-copper(II)] tetra-hydrate.

Hong-Zhen Xie1, Yan-Guang Zhang.   

Abstract

In the title compound, [Cu(2)(C(6)H(8)O(4))Cl(2)(C(15)H(11)N(3))(2)]·4H(2)O, the dinuclear copper complex is located on a crystallographic inversion centre. Each Cu atom is in a distorted square-pyramidal coordination environment, with one O atom of an adipate dianion and three N atoms from the 2,2':6',2''-terpyridine ligand occupying the basal plane, and one chlorine in the apical site. In addition, there is weak Cu-O inter-action opposite of the chlorine with a distance of 2.768 (1) Å. The adipate ligand adopts a gauche-anti-gauche conformation. The inter-stitial water mol-ecules form hydrogen-bonded tertramers that are connected to the complexes via O-H⋯O and O-H⋯Cl hydrogen bonds, thus leading to the formation of tightly hydrogen-bonded layers extending perpendicular to the b-axis direction.

Entities:  

Year:  2010        PMID: 21588166      PMCID: PMC3007253          DOI: 10.1107/S1600536810027005

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to the use of saturated aliphatic dicarboxyl­ate ligands as flexible spacer ligands, see: Forster & Cheetham (2002 ▶); Vaidhyanathan et al. (2002 ▶); Zheng, Lin et al. (2008 ▶). For related structures, see: Zheng, Cheng et al. (2008 ▶).

Experimental

Crystal data

[Cu2(C6H8O4)Cl2(C15H11N3)2]·4H2O M = 880.70 Triclinic, a = 8.2334 (16) Å b = 9.5678 (19) Å c = 11.548 (2) Å α = 83.42 (3)° β = 81.69 (3)° γ = 84.38 (3)° V = 891.2 (3) Å3 Z = 1 Mo Kα radiation μ = 1.41 mm−1 T = 298 K 0.25 × 0.22 × 0.07 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.680, T max = 0.892 8834 measured reflections 4046 independent reflections 3751 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.080 S = 1.25 4046 reflections 245 parameters H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.51 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810027005/zl2287sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810027005/zl2287Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu2(C6H8O4)Cl2(C15H11N3)2]·4H2OZ = 1
Mr = 880.70F(000) = 452
Triclinic, P1Dx = 1.641 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.2334 (16) ÅCell parameters from 7883 reflections
b = 9.5678 (19) Åθ = 3.0–27.4°
c = 11.548 (2) ŵ = 1.41 mm1
α = 83.42 (3)°T = 298 K
β = 81.69 (3)°Plate, green
γ = 84.38 (3)°0.25 × 0.22 × 0.07 mm
V = 891.2 (3) Å3
Rigaku R-AXIS RAPID diffractometer4046 independent reflections
Radiation source: fine-focus sealed tube3751 reflections with I > 2σ(I)
graphiteRint = 0.016
Detector resolution: 0 pixels mm-1θmax = 27.5°, θmin = 3.2°
ω scansh = −10→10
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −12→12
Tmin = 0.680, Tmax = 0.892l = −14→14
8834 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.080H-atom parameters constrained
S = 1.25w = 1/[σ2(Fo2) + (0.0414P)2 + 0.4176P] where P = (Fo2 + 2Fc2)/3
4046 reflections(Δ/σ)max = 0.001
245 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.51 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu0.13815 (3)0.79530 (2)0.258347 (18)0.00798 (8)
Cl0.00080 (5)0.61527 (4)0.17386 (4)0.01293 (10)
O10.31683 (16)0.65682 (13)0.29993 (11)0.0110 (3)
O20.41422 (18)0.84454 (14)0.35396 (12)0.0158 (3)
O30.40877 (18)0.42538 (14)0.16550 (12)0.0173 (3)
H3C0.50940.44580.14310.021*
H3D0.37840.47600.21320.021*
O4−0.30631 (19)0.54262 (18)0.05804 (13)0.0244 (3)
H4C−0.20000.54780.07490.029*
H4D−0.29940.5637−0.01830.029*
N1−0.00477 (19)0.78588 (16)0.41703 (13)0.0093 (3)
N20.01050 (18)0.97845 (15)0.24509 (13)0.0089 (3)
N30.24603 (19)0.88021 (16)0.10055 (13)0.0097 (3)
C1−0.0037 (2)0.67745 (19)0.50071 (16)0.0121 (3)
H1A0.07530.60200.49020.014*
C2−0.1158 (2)0.6730 (2)0.60277 (16)0.0139 (4)
H2A−0.11200.59620.65980.017*
C3−0.2338 (2)0.7858 (2)0.61759 (16)0.0151 (4)
H3A−0.31150.78510.68460.018*
C4−0.2350 (2)0.90009 (19)0.53138 (16)0.0131 (4)
H4A−0.31230.97710.54040.016*
C5−0.1188 (2)0.89694 (18)0.43166 (16)0.0098 (3)
C6−0.1046 (2)1.01126 (19)0.33414 (16)0.0104 (3)
C7−0.1938 (2)1.14257 (19)0.33008 (16)0.0128 (4)
H7A−0.27521.16550.39120.015*
C8−0.1577 (2)1.23842 (19)0.23184 (17)0.0138 (4)
H8A−0.21571.32690.22720.017*
C9−0.0360 (2)1.20397 (19)0.14023 (16)0.0126 (4)
H9A−0.01121.26830.07480.015*
C100.0474 (2)1.06991 (18)0.14981 (16)0.0100 (3)
C110.1807 (2)1.01092 (18)0.06390 (15)0.0093 (3)
C120.2341 (2)1.07967 (19)−0.04513 (16)0.0122 (3)
H12A0.18761.1691−0.06870.015*
C130.3592 (2)1.0118 (2)−0.11900 (16)0.0134 (4)
H13A0.39831.0557−0.19240.016*
C140.4240 (2)0.8782 (2)−0.08133 (16)0.0137 (4)
H14A0.50650.8308−0.12960.016*
C150.3649 (2)0.81548 (19)0.02906 (16)0.0117 (3)
H15A0.40920.72580.05410.014*
C160.4287 (2)0.71750 (18)0.33897 (15)0.0095 (3)
C170.5825 (2)0.62512 (19)0.36324 (16)0.0121 (3)
H17A0.64980.67740.40250.015*
H17B0.64560.60310.28900.015*
C180.5460 (2)0.48718 (19)0.43937 (15)0.0117 (4)
H18A0.48040.43380.39970.014*
H18C0.64890.43110.44870.014*
U11U22U33U12U13U23
Cu0.00828 (12)0.00753 (11)0.00710 (12)0.00144 (7)−0.00039 (8)0.00098 (8)
Cl0.0137 (2)0.0122 (2)0.0137 (2)−0.00219 (15)−0.00496 (16)0.00018 (16)
O10.0104 (6)0.0105 (6)0.0121 (6)0.0011 (5)−0.0030 (5)−0.0010 (5)
O20.0188 (7)0.0106 (6)0.0179 (7)0.0001 (5)−0.0016 (5)−0.0031 (5)
O30.0191 (7)0.0159 (6)0.0161 (7)−0.0004 (5)0.0020 (5)−0.0052 (5)
O40.0184 (8)0.0409 (9)0.0157 (7)−0.0097 (7)−0.0021 (6)−0.0040 (7)
N10.0105 (7)0.0089 (7)0.0086 (7)−0.0010 (5)−0.0017 (5)−0.0008 (6)
N20.0092 (7)0.0083 (7)0.0092 (7)−0.0006 (5)−0.0026 (6)0.0001 (6)
N30.0098 (7)0.0105 (7)0.0090 (7)−0.0011 (5)−0.0020 (5)−0.0001 (6)
C10.0117 (8)0.0115 (8)0.0133 (8)−0.0008 (6)−0.0034 (7)−0.0004 (7)
C20.0171 (9)0.0145 (8)0.0108 (8)−0.0047 (7)−0.0037 (7)0.0015 (7)
C30.0174 (9)0.0176 (9)0.0100 (8)−0.0050 (7)0.0025 (7)−0.0024 (7)
C40.0139 (9)0.0123 (8)0.0129 (8)−0.0017 (7)0.0008 (7)−0.0028 (7)
C50.0109 (8)0.0086 (8)0.0106 (8)−0.0011 (6)−0.0027 (6)−0.0019 (7)
C60.0099 (8)0.0116 (8)0.0105 (8)−0.0010 (6)−0.0026 (6)−0.0031 (7)
C70.0117 (9)0.0128 (8)0.0142 (9)0.0018 (7)−0.0026 (7)−0.0045 (7)
C80.0147 (9)0.0093 (8)0.0177 (9)0.0020 (6)−0.0055 (7)−0.0016 (7)
C90.0152 (9)0.0102 (8)0.0130 (8)−0.0022 (7)−0.0048 (7)0.0017 (7)
C100.0102 (8)0.0104 (8)0.0100 (8)−0.0017 (6)−0.0035 (6)0.0003 (7)
C110.0093 (8)0.0089 (8)0.0102 (8)−0.0020 (6)−0.0038 (6)0.0011 (7)
C120.0133 (9)0.0125 (8)0.0116 (8)−0.0034 (7)−0.0035 (7)−0.0002 (7)
C130.0140 (9)0.0177 (9)0.0092 (8)−0.0068 (7)−0.0013 (7)−0.0003 (7)
C140.0117 (9)0.0182 (9)0.0114 (8)−0.0030 (7)0.0013 (7)−0.0049 (7)
C150.0121 (9)0.0109 (8)0.0117 (8)−0.0004 (6)−0.0021 (7)−0.0002 (7)
C160.0120 (8)0.0100 (8)0.0053 (7)−0.0016 (6)0.0016 (6)0.0018 (6)
C170.0100 (8)0.0144 (8)0.0116 (8)−0.0003 (6)−0.0020 (6)−0.0002 (7)
C180.0119 (8)0.0122 (8)0.0109 (8)0.0036 (6)−0.0044 (7)−0.0012 (7)
Cu—N21.9552 (16)C5—C61.478 (3)
Cu—O11.9562 (14)C6—C71.391 (2)
Cu—N32.0257 (17)C7—C81.391 (3)
Cu—N12.0274 (16)C7—H7A0.9300
Cu—Cl2.5067 (8)C8—C91.393 (3)
O1—C161.294 (2)C8—H8A0.9300
O2—C161.239 (2)C9—C101.395 (2)
O3—H3C0.8658C9—H9A0.9300
O3—H3D0.7734C10—C111.483 (2)
O4—H4C0.9308C11—C121.385 (3)
O4—H4D0.8764C12—C131.397 (3)
N1—C11.335 (2)C12—H12A0.9300
N1—C51.356 (2)C13—C141.383 (3)
N2—C61.337 (2)C13—H13A0.9300
N2—C101.343 (2)C14—C151.387 (3)
N3—C151.337 (2)C14—H14A0.9300
N3—C111.358 (2)C15—H15A0.9300
C1—C21.387 (3)C16—C171.513 (3)
C1—H1A0.9300C17—C181.530 (3)
C2—C31.389 (3)C17—H17A0.9700
C2—H2A0.9300C17—H17B0.9700
C3—C41.392 (3)C18—C18i1.527 (3)
C3—H3A0.9300C18—H18A0.9700
C4—C51.388 (3)C18—H18C0.9700
C4—H4A0.9300
N2—Cu—O1157.68 (6)C8—C7—H7A121.0
N2—Cu—N379.61 (7)C6—C7—H7A121.0
O1—Cu—N399.40 (6)C7—C8—C9121.01 (17)
N2—Cu—N179.49 (7)C7—C8—H8A119.5
O1—Cu—N198.23 (6)C9—C8—H8A119.5
N3—Cu—N1158.62 (6)C8—C9—C10117.87 (17)
N2—Cu—Cl110.17 (5)C8—C9—H9A121.1
O1—Cu—Cl92.15 (4)C10—C9—H9A121.1
N3—Cu—Cl94.79 (5)N2—C10—C9120.32 (17)
N1—Cu—Cl96.54 (5)N2—C10—C11112.50 (15)
C16—O1—Cu110.59 (11)C9—C10—C11127.18 (17)
H3C—O3—H3D102.7N3—C11—C12122.00 (16)
H4C—O4—H4D104.5N3—C11—C10113.92 (15)
C1—N1—C5119.25 (16)C12—C11—C10124.06 (16)
C1—N1—Cu125.82 (13)C11—C12—C13118.57 (17)
C5—N1—Cu114.70 (12)C11—C12—H12A120.7
C6—N2—C10122.21 (15)C13—C12—H12A120.7
C6—N2—Cu118.81 (12)C14—C13—C12119.01 (17)
C10—N2—Cu118.88 (12)C14—C13—H13A120.5
C15—N3—C11119.08 (16)C12—C13—H13A120.5
C15—N3—Cu125.77 (12)C13—C14—C15119.40 (17)
C11—N3—Cu114.98 (12)C13—C14—H14A120.3
N1—C1—C2122.57 (17)C15—C14—H14A120.3
N1—C1—H1A118.7N3—C15—C14121.92 (17)
C2—C1—H1A118.7N3—C15—H15A119.0
C1—C2—C3118.37 (18)C14—C15—H15A119.0
C1—C2—H2A120.8O2—C16—O1122.70 (17)
C3—C2—H2A120.8O2—C16—C17121.07 (17)
C2—C3—C4119.53 (18)O1—C16—C17116.22 (15)
C2—C3—H3A120.2C16—C17—C18113.19 (15)
C4—C3—H3A120.2C16—C17—H17A108.9
C5—C4—C3118.75 (17)C18—C17—H17A108.9
C5—C4—H4A120.6C16—C17—H17B108.9
C3—C4—H4A120.6C18—C17—H17B108.9
N1—C5—C4121.52 (17)H17A—C17—H17B107.8
N1—C5—C6113.96 (16)C18i—C18—C17112.17 (18)
C4—C5—C6124.51 (16)C18i—C18—H18A109.2
N2—C6—C7120.59 (17)C17—C18—H18A109.2
N2—C6—C5112.72 (15)C18i—C18—H18C109.2
C7—C6—C5126.68 (17)C17—C18—H18C109.2
C8—C7—C6117.98 (17)H18A—C18—H18C107.9
D—H···AD—HH···AD···AD—H···A
O3—H3C···O4ii0.871.942.767 (2)160
O3—H3D···O10.772.082.829 (2)163
O4—H4C···Cl0.932.323.194 (2)156
O4—H4D···O3iii0.882.022.805 (2)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3C⋯O4i0.871.942.767 (2)160
O3—H3D⋯O10.772.082.829 (2)163
O4—H4C⋯Cl0.932.323.194 (2)156
O4—H4D⋯O3ii0.882.022.805 (2)148

Symmetry codes: (i) ; (ii) .

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