| Literature DB >> 21588164 |
Abstract
The Mn(II) atom in the title coordinationEntities:
Year: 2010 PMID: 21588164 PMCID: PMC3007432 DOI: 10.1107/S1600536810026322
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [MnCl2(C12H12N6)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1682 reflections |
| θ = 2.8–23.5° | |
| µ = 0.70 mm−1 | |
| β = 108.775 (4)° | Block, colorless |
| 0.20 × 0.14 × 0.08 mm | |
| Bruker APEXII CCD area-detector diffractometer | 2587 independent reflections |
| Radiation source: fine-focus sealed tube | 1660 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.5°, θmin = 1.9° |
| Absorption correction: multi-scan ( | |
| 7263 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2587 reflections | (Δ/σ)max < 0.001 |
| 178 parameters | Δρmax = 0.37 e Å−3 |
| 0 restraints | Δρmin = −0.27 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.5000 | 0.5000 | 0.0000 | 0.03010 (18) | |
| Cl1 | 0.15989 (9) | 0.47621 (4) | −0.16003 (8) | 0.0404 (2) | |
| N1 | 0.4590 (3) | 0.45414 (11) | 0.2160 (3) | 0.0350 (6) | |
| N2 | 0.5081 (3) | 0.42190 (13) | 0.4681 (3) | 0.0549 (8) | |
| N3 | 0.3232 (3) | 0.42456 (11) | 0.3864 (3) | 0.0339 (6) | |
| N4 | −0.2711 (3) | 0.14940 (11) | 0.2963 (3) | 0.0357 (6) | |
| N5 | −0.4262 (3) | 0.17945 (12) | 0.2994 (3) | 0.0462 (7) | |
| N6 | −0.4061 (3) | 0.08737 (11) | 0.4162 (3) | 0.0345 (6) | |
| C1 | 0.5808 (4) | 0.44071 (16) | 0.3598 (4) | 0.0528 (9) | |
| H1 | 0.7087 | 0.4445 | 0.3815 | 0.063* | |
| C2 | 0.2973 (4) | 0.44391 (13) | 0.2394 (3) | 0.0372 (7) | |
| H2 | 0.1814 | 0.4496 | 0.1626 | 0.045* | |
| C3 | 0.1824 (4) | 0.40794 (15) | 0.4602 (3) | 0.0451 (8) | |
| H3A | 0.0868 | 0.4391 | 0.4366 | 0.054* | |
| H3B | 0.2401 | 0.4061 | 0.5752 | 0.054* | |
| C4 | 0.0941 (4) | 0.34717 (14) | 0.4007 (3) | 0.0343 (7) | |
| C5 | −0.0630 (4) | 0.34410 (15) | 0.2691 (4) | 0.0493 (8) | |
| H5 | −0.1170 | 0.3799 | 0.2191 | 0.059* | |
| C6 | −0.1420 (4) | 0.28890 (16) | 0.2101 (4) | 0.0528 (9) | |
| H6 | −0.2486 | 0.2880 | 0.1210 | 0.063* | |
| C7 | −0.0655 (4) | 0.23505 (14) | 0.2810 (4) | 0.0379 (7) | |
| C8 | 0.0892 (4) | 0.23780 (15) | 0.4153 (4) | 0.0462 (8) | |
| H8 | 0.1405 | 0.2020 | 0.4675 | 0.055* | |
| C9 | 0.1687 (4) | 0.29315 (15) | 0.4731 (4) | 0.0450 (8) | |
| H9 | 0.2747 | 0.2941 | 0.5627 | 0.054* | |
| C10 | −0.1494 (4) | 0.17476 (15) | 0.2130 (4) | 0.0494 (9) | |
| H10A | −0.2205 | 0.1801 | 0.1010 | 0.059* | |
| H10B | −0.0501 | 0.1460 | 0.2195 | 0.059* | |
| C11 | −0.2619 (4) | 0.09541 (14) | 0.3656 (3) | 0.0363 (7) | |
| H11 | −0.1671 | 0.0671 | 0.3771 | 0.044* | |
| C12 | −0.5005 (4) | 0.13984 (15) | 0.3729 (3) | 0.0420 (8) | |
| H12 | −0.6111 | 0.1476 | 0.3935 | 0.050* |
| Mn1 | 0.0284 (3) | 0.0335 (4) | 0.0321 (3) | 0.0000 (3) | 0.0150 (3) | 0.0012 (3) |
| Cl1 | 0.0284 (4) | 0.0517 (5) | 0.0421 (4) | −0.0048 (3) | 0.0130 (3) | −0.0030 (4) |
| N1 | 0.0309 (13) | 0.0435 (17) | 0.0337 (14) | −0.0009 (11) | 0.0147 (11) | 0.0074 (11) |
| N2 | 0.0436 (17) | 0.072 (2) | 0.0460 (17) | −0.0027 (14) | 0.0098 (14) | 0.0184 (14) |
| N3 | 0.0342 (14) | 0.0362 (16) | 0.0342 (14) | −0.0088 (11) | 0.0150 (12) | 0.0015 (11) |
| N4 | 0.0338 (14) | 0.0381 (17) | 0.0365 (14) | −0.0072 (12) | 0.0131 (11) | −0.0015 (11) |
| N5 | 0.0372 (15) | 0.0432 (19) | 0.0556 (17) | 0.0008 (13) | 0.0112 (13) | 0.0039 (13) |
| N6 | 0.0284 (13) | 0.0368 (17) | 0.0402 (14) | −0.0008 (11) | 0.0139 (11) | 0.0026 (11) |
| C1 | 0.0334 (18) | 0.074 (3) | 0.053 (2) | 0.0024 (17) | 0.0168 (17) | 0.0196 (18) |
| C2 | 0.0343 (17) | 0.045 (2) | 0.0317 (17) | −0.0052 (14) | 0.0096 (13) | 0.0052 (14) |
| C3 | 0.053 (2) | 0.050 (2) | 0.0429 (18) | −0.0138 (16) | 0.0298 (16) | −0.0023 (15) |
| C4 | 0.0370 (17) | 0.041 (2) | 0.0308 (17) | −0.0088 (14) | 0.0194 (14) | 0.0019 (13) |
| C5 | 0.056 (2) | 0.040 (2) | 0.046 (2) | −0.0011 (17) | 0.0080 (17) | 0.0124 (15) |
| C6 | 0.052 (2) | 0.055 (3) | 0.039 (2) | −0.0102 (18) | −0.0037 (16) | 0.0065 (16) |
| C7 | 0.0440 (19) | 0.035 (2) | 0.0407 (18) | −0.0093 (15) | 0.0226 (15) | −0.0005 (14) |
| C8 | 0.0414 (19) | 0.038 (2) | 0.055 (2) | 0.0044 (16) | 0.0105 (17) | 0.0117 (16) |
| C9 | 0.0341 (18) | 0.047 (2) | 0.048 (2) | −0.0074 (16) | 0.0036 (15) | 0.0023 (16) |
| C10 | 0.061 (2) | 0.050 (2) | 0.047 (2) | −0.0185 (17) | 0.0307 (17) | −0.0056 (16) |
| C11 | 0.0314 (16) | 0.038 (2) | 0.0403 (17) | 0.0006 (14) | 0.0122 (14) | 0.0005 (14) |
| C12 | 0.0276 (16) | 0.042 (2) | 0.058 (2) | −0.0003 (15) | 0.0167 (15) | −0.0029 (16) |
| Mn1—N6i | 2.251 (2) | C2—H2 | 0.9300 |
| Mn1—N6ii | 2.251 (2) | C3—C4 | 1.508 (4) |
| Mn1—N1iii | 2.267 (2) | C3—H3A | 0.9700 |
| Mn1—N1 | 2.267 (2) | C3—H3B | 0.9700 |
| Mn1—Cl1iii | 2.5655 (8) | C4—C5 | 1.373 (4) |
| Mn1—Cl1 | 2.5655 (8) | C4—C9 | 1.378 (4) |
| N1—C2 | 1.327 (3) | C5—C6 | 1.377 (4) |
| N1—C1 | 1.342 (3) | C5—H5 | 0.9300 |
| N2—C1 | 1.316 (3) | C6—C7 | 1.375 (4) |
| N2—N3 | 1.357 (3) | C6—H6 | 0.9300 |
| N3—C2 | 1.321 (3) | C7—C8 | 1.376 (4) |
| N3—C3 | 1.466 (3) | C7—C10 | 1.506 (4) |
| N4—C11 | 1.325 (3) | C8—C9 | 1.378 (4) |
| N4—N5 | 1.356 (3) | C8—H8 | 0.9300 |
| N4—C10 | 1.464 (3) | C9—H9 | 0.9300 |
| N5—C12 | 1.315 (4) | C10—H10A | 0.9700 |
| N6—C11 | 1.320 (3) | C10—H10B | 0.9700 |
| N6—C12 | 1.344 (4) | C11—H11 | 0.9300 |
| N6—Mn1iv | 2.251 (2) | C12—H12 | 0.9300 |
| C1—H1 | 0.9300 | ||
| N6i—Mn1—N6ii | 180.0 | N3—C3—H3A | 109.3 |
| N6i—Mn1—N1iii | 92.51 (8) | C4—C3—H3A | 109.3 |
| N6ii—Mn1—N1iii | 87.49 (8) | N3—C3—H3B | 109.3 |
| N6i—Mn1—N1 | 87.49 (8) | C4—C3—H3B | 109.3 |
| N6ii—Mn1—N1 | 92.51 (8) | H3A—C3—H3B | 107.9 |
| N1iii—Mn1—N1 | 180.00 (12) | C5—C4—C9 | 117.8 (3) |
| N6i—Mn1—Cl1iii | 90.81 (6) | C5—C4—C3 | 120.4 (3) |
| N6ii—Mn1—Cl1iii | 89.19 (6) | C9—C4—C3 | 121.8 (3) |
| N1iii—Mn1—Cl1iii | 89.34 (6) | C4—C5—C6 | 121.2 (3) |
| N1—Mn1—Cl1iii | 90.66 (6) | C4—C5—H5 | 119.4 |
| N6i—Mn1—Cl1 | 89.19 (6) | C6—C5—H5 | 119.4 |
| N6ii—Mn1—Cl1 | 90.81 (6) | C7—C6—C5 | 120.9 (3) |
| N1iii—Mn1—Cl1 | 90.66 (6) | C7—C6—H6 | 119.6 |
| N1—Mn1—Cl1 | 89.34 (6) | C5—C6—H6 | 119.6 |
| Cl1iii—Mn1—Cl1 | 180.0 | C6—C7—C8 | 118.3 (3) |
| C2—N1—C1 | 101.8 (2) | C6—C7—C10 | 120.6 (3) |
| C2—N1—Mn1 | 126.18 (18) | C8—C7—C10 | 121.1 (3) |
| C1—N1—Mn1 | 131.04 (18) | C7—C8—C9 | 120.6 (3) |
| C1—N2—N3 | 101.7 (2) | C7—C8—H8 | 119.7 |
| C2—N3—N2 | 109.8 (2) | C9—C8—H8 | 119.7 |
| C2—N3—C3 | 128.3 (2) | C8—C9—C4 | 121.3 (3) |
| N2—N3—C3 | 121.9 (2) | C8—C9—H9 | 119.4 |
| C11—N4—N5 | 110.0 (2) | C4—C9—H9 | 119.4 |
| C11—N4—C10 | 128.7 (2) | N4—C10—C7 | 112.7 (2) |
| N5—N4—C10 | 121.2 (2) | N4—C10—H10A | 109.0 |
| C12—N5—N4 | 101.6 (2) | C7—C10—H10A | 109.0 |
| C11—N6—C12 | 102.3 (2) | N4—C10—H10B | 109.0 |
| C11—N6—Mn1iv | 127.6 (2) | C7—C10—H10B | 109.0 |
| C12—N6—Mn1iv | 128.76 (18) | H10A—C10—H10B | 107.8 |
| N2—C1—N1 | 115.9 (3) | N6—C11—N4 | 110.5 (3) |
| N2—C1—H1 | 122.1 | N6—C11—H11 | 124.8 |
| N1—C1—H1 | 122.1 | N4—C11—H11 | 124.8 |
| N3—C2—N1 | 110.8 (2) | N5—C12—N6 | 115.6 (2) |
| N3—C2—H2 | 124.6 | N5—C12—H12 | 122.2 |
| N1—C2—H2 | 124.6 | N6—C12—H12 | 122.2 |
| N3—C3—C4 | 111.7 (2) | ||
| N6i—Mn1—N1—C2 | 69.1 (2) | N3—C3—C4—C5 | −90.4 (3) |
| N6ii—Mn1—N1—C2 | −110.9 (2) | N3—C3—C4—C9 | 88.3 (3) |
| N1iii—Mn1—N1—C2 | −133 (100) | C9—C4—C5—C6 | −0.9 (4) |
| Cl1iii—Mn1—N1—C2 | 159.9 (2) | C3—C4—C5—C6 | 177.9 (3) |
| Cl1—Mn1—N1—C2 | −20.1 (2) | C4—C5—C6—C7 | −0.2 (5) |
| N6i—Mn1—N1—C1 | −97.5 (3) | C5—C6—C7—C8 | 1.8 (5) |
| N6ii—Mn1—N1—C1 | 82.5 (3) | C5—C6—C7—C10 | −178.3 (3) |
| N1iii—Mn1—N1—C1 | 60 (100) | C6—C7—C8—C9 | −2.4 (4) |
| Cl1iii—Mn1—N1—C1 | −6.7 (3) | C10—C7—C8—C9 | 177.7 (3) |
| Cl1—Mn1—N1—C1 | 173.3 (3) | C7—C8—C9—C4 | 1.3 (5) |
| C1—N2—N3—C2 | 0.2 (3) | C5—C4—C9—C8 | 0.3 (4) |
| C1—N2—N3—C3 | −179.4 (3) | C3—C4—C9—C8 | −178.5 (2) |
| C11—N4—N5—C12 | 0.0 (3) | C11—N4—C10—C7 | −124.3 (3) |
| C10—N4—N5—C12 | 175.2 (2) | N5—N4—C10—C7 | 61.5 (4) |
| N3—N2—C1—N1 | −1.0 (4) | C6—C7—C10—N4 | −98.4 (3) |
| C2—N1—C1—N2 | 1.4 (4) | C8—C7—C10—N4 | 81.5 (4) |
| Mn1—N1—C1—N2 | 170.3 (2) | C12—N6—C11—N4 | −0.1 (3) |
| N2—N3—C2—N1 | 0.7 (3) | Mn1iv—N6—C11—N4 | 167.33 (17) |
| C3—N3—C2—N1 | −179.7 (3) | N5—N4—C11—N6 | 0.1 (3) |
| C1—N1—C2—N3 | −1.2 (3) | C10—N4—C11—N6 | −174.7 (2) |
| Mn1—N1—C2—N3 | −170.87 (18) | N4—N5—C12—N6 | −0.1 (3) |
| C2—N3—C3—C4 | 74.3 (4) | C11—N6—C12—N5 | 0.1 (3) |
| N2—N3—C3—C4 | −106.2 (3) | Mn1iv—N6—C12—N5 | −167.11 (19) |
| H··· | ||||
| C9—H9···N5v | 0.93 | 2.61 | 3.523 (4) | 168 |
| C11—H11···Cl1vi | 0.93 | 2.77 | 3.635 (3) | 155 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C9—H9⋯N5i | 0.93 | 2.61 | 3.523 (4) | 168 |
| C11—H11⋯Cl1ii | 0.93 | 2.77 | 3.635 (3) | 155 |
Symmetry codes: (i) ; (ii) .