| Literature DB >> 21588143 |
Abstract
The title compound, {(C(2)H(8)N)[Dy(C(2)O(4))(2)(H(2)O)]·3H(2)O}(n), was obtained as an unexpected product under hydro-thermal conditions. The Dy(III) atom is chelated by four oxalate anions, two of which are situated on two different centres of inversion. The distorted tricapped trigonal-prismatic coordination sphere of the Dy(III) atom is completed by a water mol-ecule. The bridging mode of the anions results in the formation of a three-dimensional network with cavities where the ammonium cations and the uncoordinated water mol-ecules reside. The structure is stabilized by numerous N-H⋯O and O-H⋯O hydrogen-bonding inter-actions.Entities:
Year: 2010 PMID: 21588143 PMCID: PMC3007264 DOI: 10.1107/S1600536810026140
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| (C2H8N)[Dy(C2O4)2(H2O)]·3H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9337 reflections |
| θ = 2.4–27.6° | |
| µ = 5.61 mm−1 | |
| β = 122.463 (1)° | Block, colourless |
| 0.19 × 0.15 × 0.04 mm | |
| Bruker APEXII area-detector diffractometer | 3108 independent reflections |
| Radiation source: fine-focus sealed tube | 2810 reflections with |
| graphite | |
| ω scans | θmax = 27.6°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 20173 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3108 reflections | (Δ/σ)max = 0.001 |
| 211 parameters | Δρmax = 0.84 e Å−3 |
| 12 restraints | Δρmin = −0.91 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Dy1 | 0.117659 (15) | −0.013113 (10) | −0.167676 (10) | 0.01672 (5) | |
| N1 | 0.4246 (4) | −0.1300 (3) | −0.3049 (3) | 0.0407 (7) | |
| H1A | 0.393 (5) | −0.098 (3) | −0.263 (3) | 0.049* | |
| H1B | 0.378 (5) | −0.095 (3) | −0.368 (3) | 0.049* | |
| O1 | 0.2048 (2) | −0.21224 (15) | −0.15624 (17) | 0.0250 (4) | |
| O1W | 0.1053 (3) | −0.02065 (19) | −0.34320 (18) | 0.0317 (5) | |
| H1WA | 0.036 (4) | −0.061 (2) | −0.396 (2) | 0.038* | |
| H1WB | 0.106 (4) | 0.0401 (18) | −0.375 (2) | 0.038* | |
| O2 | −0.1030 (2) | −0.13712 (15) | −0.29291 (17) | 0.0232 (4) | |
| O2W | 0.5505 (4) | −0.2809 (3) | −0.0349 (3) | 0.0669 (9) | |
| H2WA | 0.489 (5) | −0.291 (5) | −0.009 (3) | 0.080* | |
| H2WB | 0.624 (4) | −0.238 (4) | 0.016 (3) | 0.080* | |
| O3 | −0.1939 (2) | −0.31830 (15) | −0.32907 (16) | 0.0219 (4) | |
| O3W | −0.1188 (4) | −0.1547 (2) | −0.5332 (3) | 0.0576 (8) | |
| H3WA | −0.090 (5) | −0.222 (2) | −0.529 (4) | 0.069* | |
| H3WB | −0.209 (3) | −0.155 (3) | −0.543 (4) | 0.069* | |
| O4 | 0.1169 (2) | −0.39375 (16) | −0.20338 (18) | 0.0278 (5) | |
| O4W | 0.6648 (5) | −0.5050 (3) | −0.0068 (3) | 0.0701 (11) | |
| H4WA | 0.694 (6) | −0.530 (4) | 0.056 (3) | 0.084* | |
| H4WB | 0.596 (5) | −0.456 (4) | −0.020 (4) | 0.084* | |
| O5 | 0.3400 (3) | −0.01122 (16) | 0.02214 (18) | 0.0263 (5) | |
| O6 | 0.0192 (3) | −0.11779 (16) | −0.06741 (17) | 0.0276 (4) | |
| O7 | 0.0381 (3) | 0.11134 (17) | −0.06433 (18) | 0.0300 (5) | |
| O8 | 0.3894 (3) | −0.01101 (15) | −0.14319 (17) | 0.0226 (4) | |
| C1 | 0.0965 (3) | −0.2872 (2) | −0.2069 (2) | 0.0197 (5) | |
| C2 | −0.0829 (3) | −0.2435 (2) | −0.2832 (2) | 0.0180 (5) | |
| C3 | 0.4856 (4) | −0.0001 (2) | 0.0483 (2) | 0.0198 (6) | |
| C4 | −0.0055 (3) | −0.0664 (2) | −0.0010 (2) | 0.0220 (6) | |
| C5 | 0.3567 (6) | −0.2468 (4) | −0.3333 (4) | 0.0761 (15) | |
| H5A | 0.2387 | −0.2431 | −0.3721 | 0.091* | |
| H5B | 0.3984 | −0.2910 | −0.2667 | 0.091* | |
| H5C | 0.3882 | −0.2827 | −0.3796 | 0.091* | |
| C6 | 0.6030 (5) | −0.1251 (5) | −0.2451 (4) | 0.0710 (14) | |
| H6A | 0.6384 | −0.0464 | −0.2279 | 0.085* | |
| H6B | 0.6396 | −0.1572 | −0.2901 | 0.085* | |
| H6C | 0.6490 | −0.1686 | −0.1777 | 0.085* |
| Dy1 | 0.01578 (8) | 0.01427 (7) | 0.01843 (8) | −0.00014 (4) | 0.00807 (6) | −0.00013 (4) |
| N1 | 0.0347 (18) | 0.0526 (18) | 0.0363 (17) | 0.0048 (14) | 0.0200 (15) | −0.0078 (14) |
| O1 | 0.0179 (11) | 0.0192 (9) | 0.0295 (11) | −0.0011 (8) | 0.0073 (9) | −0.0039 (8) |
| O1W | 0.0342 (14) | 0.0367 (12) | 0.0218 (11) | −0.0059 (10) | 0.0133 (11) | −0.0019 (9) |
| O2 | 0.0213 (11) | 0.0158 (9) | 0.0259 (10) | 0.0016 (7) | 0.0082 (9) | 0.0007 (8) |
| O2W | 0.053 (2) | 0.0513 (18) | 0.066 (2) | 0.0025 (14) | 0.0119 (17) | −0.0131 (15) |
| O3 | 0.0172 (10) | 0.0179 (9) | 0.0272 (11) | −0.0014 (7) | 0.0096 (9) | −0.0029 (7) |
| O3W | 0.066 (2) | 0.0331 (13) | 0.0650 (19) | 0.0039 (13) | 0.0292 (19) | 0.0093 (13) |
| O4 | 0.0228 (11) | 0.0161 (9) | 0.0319 (11) | 0.0016 (8) | 0.0063 (9) | −0.0012 (8) |
| O4W | 0.074 (3) | 0.068 (2) | 0.0376 (18) | 0.0164 (15) | 0.0098 (18) | −0.0028 (14) |
| O5 | 0.0184 (11) | 0.0392 (11) | 0.0218 (11) | −0.0021 (8) | 0.0111 (9) | −0.0007 (8) |
| O6 | 0.0340 (12) | 0.0239 (10) | 0.0308 (12) | −0.0039 (8) | 0.0213 (10) | −0.0040 (8) |
| O7 | 0.0389 (13) | 0.0241 (10) | 0.0397 (13) | 0.0032 (9) | 0.0294 (11) | 0.0059 (9) |
| O8 | 0.0177 (11) | 0.0297 (10) | 0.0187 (10) | −0.0005 (7) | 0.0085 (9) | −0.0015 (7) |
| C1 | 0.0209 (15) | 0.0194 (12) | 0.0179 (13) | 0.0005 (10) | 0.0098 (12) | 0.0006 (10) |
| C2 | 0.0197 (15) | 0.0195 (12) | 0.0165 (13) | −0.0014 (10) | 0.0108 (12) | −0.0012 (10) |
| C3 | 0.0205 (15) | 0.0161 (11) | 0.0200 (14) | 0.0015 (10) | 0.0090 (12) | 0.0005 (9) |
| C4 | 0.0157 (14) | 0.0231 (14) | 0.0252 (15) | −0.0009 (10) | 0.0098 (12) | 0.0000 (10) |
| C5 | 0.096 (4) | 0.059 (3) | 0.082 (4) | −0.017 (3) | 0.054 (3) | −0.020 (2) |
| C6 | 0.035 (2) | 0.121 (4) | 0.052 (3) | 0.007 (2) | 0.020 (2) | −0.019 (3) |
| Dy1—O3i | 2.3846 (17) | O3W—H3WA | 0.83 (3) |
| Dy1—O2 | 2.3883 (19) | O3W—H3WB | 0.80 (4) |
| Dy1—O5 | 2.390 (2) | O4—C1 | 1.249 (3) |
| Dy1—O6 | 2.427 (2) | O4—Dy1ii | 2.4386 (19) |
| Dy1—O1 | 2.4335 (18) | O4W—H4WA | 0.84 (3) |
| Dy1—O4i | 2.4386 (19) | O4W—H4WB | 0.82 (4) |
| Dy1—O8 | 2.445 (2) | O5—C3 | 1.248 (4) |
| Dy1—O1W | 2.451 (2) | O6—C4 | 1.248 (3) |
| Dy1—O7 | 2.464 (2) | O7—C4iii | 1.248 (3) |
| N1—C6 | 1.451 (5) | O8—C3iv | 1.246 (4) |
| N1—C5 | 1.463 (6) | C1—C2 | 1.551 (4) |
| N1—H1A | 0.89 (4) | C3—O8iv | 1.246 (4) |
| N1—H1B | 0.87 (4) | C3—C3iv | 1.549 (6) |
| O1—C1 | 1.248 (3) | C4—O7iii | 1.248 (3) |
| O1W—H1WA | 0.84 (4) | C4—C4iii | 1.544 (5) |
| O1W—H1WB | 0.84 (4) | C5—H5A | 0.9600 |
| O2—C2 | 1.245 (3) | C5—H5B | 0.9600 |
| O2W—H2WA | 0.86 (5) | C5—H5C | 0.9600 |
| O2W—H2WB | 0.85 (4) | C6—H6A | 0.9600 |
| O3—C2 | 1.254 (3) | C6—H6B | 0.9600 |
| O3—Dy1ii | 2.3846 (17) | C6—H6C | 0.9600 |
| O3i—Dy1—O2 | 135.67 (6) | C5—N1—H1B | 104 (3) |
| O3i—Dy1—O5 | 85.20 (6) | H1A—N1—H1B | 110 (4) |
| O2—Dy1—O5 | 138.66 (7) | C1—O1—Dy1 | 118.16 (17) |
| O3i—Dy1—O6 | 135.05 (6) | Dy1—O1W—H1WA | 121 (2) |
| O2—Dy1—O6 | 70.73 (7) | Dy1—O1W—H1WB | 121 (2) |
| O5—Dy1—O6 | 74.25 (7) | H1WA—O1W—H1WB | 103 (2) |
| O3i—Dy1—O1 | 143.39 (7) | C2—O2—Dy1 | 119.42 (17) |
| O2—Dy1—O1 | 67.30 (6) | H2WA—O2W—H2WB | 99 (2) |
| O5—Dy1—O1 | 82.32 (7) | C2—O3—Dy1ii | 118.80 (17) |
| O6—Dy1—O1 | 73.44 (7) | H3WA—O3W—H3WB | 107 (3) |
| O3i—Dy1—O4i | 67.45 (6) | C1—O4—Dy1ii | 118.02 (17) |
| O2—Dy1—O4i | 71.67 (6) | H4WA—O4W—H4WB | 105 (3) |
| O5—Dy1—O4i | 139.00 (7) | C3—O5—Dy1 | 121.19 (19) |
| O6—Dy1—O4i | 103.57 (7) | C4—O6—Dy1 | 120.35 (17) |
| O1—Dy1—O4i | 137.38 (6) | C4iii—O7—Dy1 | 119.20 (17) |
| O3i—Dy1—O8 | 71.14 (6) | C3iv—O8—Dy1 | 119.36 (19) |
| O2—Dy1—O8 | 124.42 (7) | O1—C1—O4 | 127.0 (3) |
| O5—Dy1—O8 | 66.48 (7) | O1—C1—C2 | 116.6 (2) |
| O6—Dy1—O8 | 130.33 (7) | O4—C1—C2 | 116.4 (2) |
| O1—Dy1—O8 | 72.31 (6) | O2—C2—O3 | 126.2 (3) |
| O4i—Dy1—O8 | 125.97 (7) | O2—C2—C1 | 116.7 (2) |
| O3i—Dy1—O1W | 81.96 (7) | O3—C2—C1 | 117.1 (2) |
| O2—Dy1—O1W | 71.05 (7) | O8iv—C3—O5 | 127.6 (3) |
| O5—Dy1—O1W | 133.30 (8) | O8iv—C3—C3iv | 116.1 (3) |
| O6—Dy1—O1W | 140.18 (7) | O5—C3—C3iv | 116.3 (3) |
| O1—Dy1—O1W | 81.98 (7) | O7iii—C4—O6 | 126.7 (3) |
| O4i—Dy1—O1W | 74.28 (8) | O7iii—C4—C4iii | 116.5 (3) |
| O8—Dy1—O1W | 66.87 (7) | O6—C4—C4iii | 116.8 (3) |
| O3i—Dy1—O7 | 69.77 (6) | N1—C5—H5A | 109.5 |
| O2—Dy1—O7 | 111.44 (7) | N1—C5—H5B | 109.5 |
| O5—Dy1—O7 | 71.94 (7) | H5A—C5—H5B | 109.5 |
| O6—Dy1—O7 | 65.99 (7) | N1—C5—H5C | 109.5 |
| O1—Dy1—O7 | 136.30 (7) | H5A—C5—H5C | 109.5 |
| O4i—Dy1—O7 | 70.20 (7) | H5B—C5—H5C | 109.5 |
| O8—Dy1—O7 | 124.13 (7) | N1—C6—H6A | 109.5 |
| O1W—Dy1—O7 | 140.87 (7) | N1—C6—H6B | 109.5 |
| C6—N1—C5 | 114.3 (4) | H6A—C6—H6B | 109.5 |
| C6—N1—H1A | 108 (2) | N1—C6—H6C | 109.5 |
| C5—N1—H1A | 108 (2) | H6A—C6—H6C | 109.5 |
| C6—N1—H1B | 112 (3) | H6B—C6—H6C | 109.5 |
| O3i—Dy1—O1—C1 | −146.82 (18) | O3i—Dy1—O7—C4iii | −163.0 (2) |
| O2—Dy1—O1—C1 | −9.33 (19) | O2—Dy1—O7—C4iii | 64.6 (2) |
| O5—Dy1—O1—C1 | 142.0 (2) | O5—Dy1—O7—C4iii | −71.4 (2) |
| O6—Dy1—O1—C1 | 66.3 (2) | O6—Dy1—O7—C4iii | 8.9 (2) |
| O4i—Dy1—O1—C1 | −25.9 (2) | O1—Dy1—O7—C4iii | −14.4 (3) |
| O8—Dy1—O1—C1 | −150.3 (2) | O4i—Dy1—O7—C4iii | 124.6 (2) |
| O1W—Dy1—O1—C1 | −82.1 (2) | O8—Dy1—O7—C4iii | −114.7 (2) |
| O7—Dy1—O1—C1 | 88.5 (2) | O1W—Dy1—O7—C4iii | 150.63 (19) |
| O3i—Dy1—O2—C2 | 156.75 (18) | O3i—Dy1—O8—C3iv | 86.85 (17) |
| O5—Dy1—O2—C2 | −34.0 (2) | O2—Dy1—O8—C3iv | −140.12 (16) |
| O6—Dy1—O2—C2 | −67.6 (2) | O5—Dy1—O8—C3iv | −6.14 (16) |
| O1—Dy1—O2—C2 | 11.96 (19) | O6—Dy1—O8—C3iv | −46.9 (2) |
| O4i—Dy1—O2—C2 | −179.8 (2) | O1—Dy1—O8—C3iv | −95.32 (18) |
| O8—Dy1—O2—C2 | 58.7 (2) | O4i—Dy1—O8—C3iv | 128.38 (17) |
| O1W—Dy1—O2—C2 | 101.0 (2) | O1W—Dy1—O8—C3iv | 176.00 (19) |
| O7—Dy1—O2—C2 | −120.7 (2) | O7—Dy1—O8—C3iv | 39.15 (19) |
| O3i—Dy1—O5—C3 | −65.25 (18) | Dy1—O1—C1—O4 | −173.8 (2) |
| O2—Dy1—O5—C3 | 122.27 (18) | Dy1—O1—C1—C2 | 6.6 (3) |
| O6—Dy1—O5—C3 | 155.14 (19) | Dy1ii—O4—C1—O1 | −171.9 (2) |
| O1—Dy1—O5—C3 | 80.26 (19) | Dy1ii—O4—C1—C2 | 7.7 (3) |
| O4i—Dy1—O5—C3 | −112.15 (19) | Dy1—O2—C2—O3 | 166.6 (2) |
| O8—Dy1—O5—C3 | 6.26 (17) | Dy1—O2—C2—C1 | −13.2 (3) |
| O1W—Dy1—O5—C3 | 9.0 (2) | Dy1ii—O3—C2—O2 | 165.2 (2) |
| O7—Dy1—O5—C3 | −135.52 (19) | Dy1ii—O3—C2—C1 | −15.0 (3) |
| O3i—Dy1—O6—C4 | 1.9 (3) | O1—C1—C2—O2 | 4.2 (4) |
| O2—Dy1—O6—C4 | −134.4 (2) | O4—C1—C2—O2 | −175.4 (2) |
| O5—Dy1—O6—C4 | 68.0 (2) | O1—C1—C2—O3 | −175.6 (2) |
| O1—Dy1—O6—C4 | 154.5 (2) | O4—C1—C2—O3 | 4.7 (4) |
| O4i—Dy1—O6—C4 | −69.7 (2) | Dy1—O5—C3—O8iv | 174.11 (19) |
| O8—Dy1—O6—C4 | 106.4 (2) | Dy1—O5—C3—C3iv | −5.9 (3) |
| O1W—Dy1—O6—C4 | −151.28 (19) | Dy1—O6—C4—O7iii | −171.5 (2) |
| O7—Dy1—O6—C4 | −8.9 (2) | Dy1—O6—C4—C4iii | 8.4 (4) |
| H··· | ||||
| N1—H1A···O8 | 0.89 (4) | 2.00 (4) | 2.866 (4) | 163 (4) |
| N1—H1A···O1W | 0.89 (4) | 2.52 (4) | 3.090 (4) | 122 (3) |
| O1W—H1WA···O3W | 0.84 (4) | 2.03 (2) | 2.857 (4) | 173 (3) |
| O4W—H4WB···O2W | 0.82 (4) | 2.06 (3) | 2.767 (4) | 144 (5) |
| N1—H1B···O4Wv | 0.87 (4) | 1.91 (4) | 2.759 (5) | 165 (4) |
| O1W—H1WB···O3Wvi | 0.84 (4) | 1.92 (2) | 2.744 (3) | 167 (3) |
| O2W—H2WB···O3vii | 0.85 (4) | 2.06 (2) | 2.876 (4) | 161 (5) |
| O3W—H3WA···O7ii | 0.85 (4) | 2.24 (3) | 2.959 (3) | 145 (4) |
| O3W—H3WA···O6viii | 0.83 (4) | 2.34 (2) | 3.110 (3) | 156 (4) |
| O3W—H3WB···O4Wix | 0.80 (5) | 2.42 (3) | 2.959 (5) | 125 (4) |
| O3W—H3WB···O2Wix | 0.80 (5) | 2.49 (2) | 3.256 (5) | 160 (4) |
| O4W—H4WA···O4x | 0.84 (4) | 2.10 (3) | 2.837 (4) | 147 (5) |
Selected bond lengths (Å)
| Dy1—O3i | 2.3846 (17) |
| Dy1—O2 | 2.3883 (19) |
| Dy1—O5 | 2.390 (2) |
| Dy1—O6 | 2.427 (2) |
| Dy1—O1 | 2.4335 (18) |
| Dy1—O4i | 2.4386 (19) |
| Dy1—O8 | 2.445 (2) |
| Dy1—O1 | 2.451 (2) |
| Dy1—O7 | 2.464 (2) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.89 (4) | 2.00 (4) | 2.866 (4) | 163 (4) |
| N1—H1 | 0.89 (4) | 2.52 (4) | 3.090 (4) | 122 (3) |
| O1 | 0.84 (4) | 2.03 (2) | 2.857 (4) | 173 (3) |
| O4 | 0.82 (4) | 2.06 (3) | 2.767 (4) | 144 (5) |
| N1—H1 | 0.87 (4) | 1.91 (4) | 2.759 (5) | 165 (4) |
| O1 | 0.84 (4) | 1.92 (2) | 2.744 (3) | 167 (3) |
| O2 | 0.85 (4) | 2.06 (2) | 2.876 (4) | 161 (5) |
| O3 | 0.85 (4) | 2.24 (3) | 2.959 (3) | 145 (4) |
| O3 | 0.83 (4) | 2.34 (2) | 3.110 (3) | 156 (4) |
| O3 | 0.80 (5) | 2.42 (3) | 2.959 (5) | 125 (4) |
| O3 | 0.80 (5) | 2.49 (2) | 3.256 (5) | 160 (4) |
| O4 | 0.84 (4) | 2.10 (3) | 2.837 (4) | 147 (5) |
Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .