Literature DB >> 21588031

Ethyl 1-(2-hy-droxy-eth-yl)-2-phenyl-1H-benzimidazole-5-carboxyl-ate.

Nurasyikin Hamzah, Shafida Abd Hamid, Aisyah Saad Abdul Rahim, Mohd Mustaqim Rosli, Hoong-Kun Fun.   

Abstract

There are two mol-ecules in the asymmetric unit of the title compound, C(18)H(18)N(2)O(3). In each one, the benzimidazole ring system is essentially planar, with maximum deviations of 0.027 (1) and 0.032 (1)Å, and makes dihedral angles of 38.64 (6) and 41.48 (6)°, respectively, with the attached benzene rings. An intra-molecular C-H⋯O hydrogen bond is observed in each mol-ecule. The two independent mol-ecules are connected into a dimer by two inter-molecular O-H⋯N hydrogen bonds. In the crystal, mol-ecules form a two-dimensional layers parallel to (012) via weak inter-molecular C-H⋯O hydrogen bonds. In addition, weak π-π stacking inter-actions are observed with centroid-centroid distances of 3.5244 (12) and 3.6189 (12) Å.

Entities:  

Year:  2010        PMID: 21588031      PMCID: PMC3006730          DOI: 10.1107/S1600536810023639

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the applications of benzimidazole and its derivatives in the pharmaceutical and biological fields, see: Horton et al. (2003 ▶). These heterocycles can serve as mol­ecular scaffolds with versatile binding properties via modifications of their functional groups, see: DeSimone et al. (2004 ▶). For the biological activity of benzimidazole derivatives, see: Gowda et al. (2009 ▶); Tunçbilek et al. (2009 ▶); Achar et al. (2010 ▶). For related structures, see: Arumugam et al. (2010 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C18H18N2O3 M = 310.34 Triclinic, a = 8.997 (2) Å b = 12.988 (3) Å c = 15.030 (3) Å α = 103.764 (6)° β = 107.202 (6)° γ = 102.929 (6)° V = 1545.5 (6) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 100 K 0.34 × 0.20 × 0.11 mm

Data collection

Bruker APEXII DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.970, T max = 0.990 34907 measured reflections 9838 independent reflections 6952 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.167 S = 1.04 9838 reflections 425 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.41 e Å−3 Δρmin = −0.40 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810023639/lh5069sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810023639/lh5069Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H18N2O3Z = 4
Mr = 310.34F(000) = 656
Triclinic, P1Dx = 1.334 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.997 (2) ÅCell parameters from 6508 reflections
b = 12.988 (3) Åθ = 2.6–31.1°
c = 15.030 (3) ŵ = 0.09 mm1
α = 103.764 (6)°T = 100 K
β = 107.202 (6)°Block, colourless
γ = 102.929 (6)°0.34 × 0.20 × 0.11 mm
V = 1545.5 (6) Å3
Bruker APEXII DUO CCD area-detector diffractometer9838 independent reflections
Radiation source: fine-focus sealed tube6952 reflections with I > 2σ(I)
graphiteRint = 0.051
φ and ω scansθmax = 31.1°, θmin = 1.5°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −13→13
Tmin = 0.970, Tmax = 0.990k = −18→18
34907 measured reflectionsl = −21→21
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.051Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.167H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.0944P)2 + 0.2365P] where P = (Fo2 + 2Fc2)/3
9838 reflections(Δ/σ)max = 0.001
425 parametersΔρmax = 0.41 e Å3
0 restraintsΔρmin = −0.40 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O1A1.15213 (13)0.95597 (9)0.66787 (8)0.0189 (2)
O2A0.54072 (14)1.15419 (10)0.96176 (9)0.0311 (3)
O3A0.78042 (13)1.28774 (9)1.05882 (8)0.0235 (2)
N1A1.02010 (14)0.92733 (10)0.82790 (8)0.0147 (2)
N2A0.74895 (14)0.84883 (10)0.78666 (9)0.0155 (2)
C1A0.96687 (16)1.00752 (11)0.87590 (10)0.0148 (2)
C2A1.05169 (17)1.11622 (12)0.94178 (10)0.0171 (3)
H2AA1.16411.14800.95960.020*
C3A0.95920 (17)1.17389 (12)0.97904 (10)0.0171 (3)
H3AA1.01101.24621.02330.021*
C4A0.78835 (17)1.12585 (12)0.95159 (10)0.0160 (3)
C5A0.70664 (17)1.01725 (12)0.88665 (10)0.0161 (3)
H5AA0.59430.98530.86890.019*
C6A0.79750 (16)0.95790 (12)0.84909 (10)0.0150 (3)
C7A0.88525 (16)0.83316 (11)0.77649 (10)0.0149 (3)
C8A0.88701 (16)0.72261 (11)0.72397 (10)0.0161 (3)
C9A0.78407 (17)0.62979 (12)0.73233 (11)0.0192 (3)
H9AA0.71780.64040.76860.023*
C10A0.78010 (19)0.52256 (13)0.68722 (12)0.0219 (3)
H10A0.71130.46160.69310.026*
C11A0.87878 (19)0.50601 (13)0.63319 (12)0.0234 (3)
H11A0.87850.43420.60430.028*
C12A0.97797 (19)0.59712 (13)0.62236 (12)0.0235 (3)
H12A1.04250.58580.58500.028*
C13A0.98171 (18)0.70472 (12)0.66663 (11)0.0195 (3)
H13A1.04740.76510.65820.023*
C14A1.19033 (16)0.94750 (12)0.83426 (10)0.0170 (3)
H14A1.20890.87630.81380.020*
H14B1.26330.98680.90230.020*
C15A1.23125 (17)1.01573 (12)0.77022 (10)0.0178 (3)
H15A1.19931.08240.78500.021*
H15B1.34901.03920.78670.021*
C16A0.68862 (19)1.18841 (12)0.98976 (11)0.0195 (3)
C17A0.6900 (2)1.35453 (14)1.09824 (13)0.0270 (3)
H17A0.60011.35591.04410.032*
H17B0.76221.43071.13340.032*
C18A0.6227 (2)1.30985 (16)1.16688 (13)0.0309 (4)
H18A0.57061.35911.19440.046*
H18B0.71051.30511.21900.046*
H18C0.54381.23691.13100.046*
O1B0.44589 (13)0.70587 (9)0.63176 (8)0.0198 (2)
O2B0.98042 (13)1.37266 (9)0.85047 (9)0.0261 (2)
O3B0.72718 (13)1.37041 (9)0.84618 (8)0.0218 (2)
N1B0.56260 (14)0.88812 (10)0.55835 (8)0.0146 (2)
N2B0.83526 (14)0.96642 (10)0.60695 (9)0.0159 (2)
C1B0.60025 (16)0.99572 (11)0.61970 (10)0.0144 (2)
C2B0.50052 (16)1.05442 (12)0.64814 (10)0.0163 (3)
H2BA0.38731.02240.62550.020*
C3B0.57926 (17)1.16295 (12)0.71190 (10)0.0170 (3)
H3BA0.51741.20550.73200.020*
C4B0.75098 (17)1.21029 (11)0.74702 (10)0.0158 (3)
C5B0.84839 (16)1.15126 (11)0.71697 (10)0.0155 (3)
H5BA0.96181.18300.74040.019*
C6B0.77088 (16)1.04313 (11)0.65068 (10)0.0146 (2)
C7B0.70751 (16)0.87512 (11)0.55223 (10)0.0150 (3)
C8B0.72348 (17)0.77623 (12)0.48846 (10)0.0169 (3)
C9B0.83211 (19)0.79407 (13)0.43951 (12)0.0235 (3)
H9BA0.88940.86660.44670.028*
C10B0.8546 (2)0.70370 (15)0.38006 (13)0.0299 (4)
H10B0.92840.71600.34860.036*
C11B0.7677 (2)0.59535 (14)0.36748 (13)0.0270 (3)
H11B0.78130.53520.32640.032*
C12B0.66018 (19)0.57676 (13)0.41618 (12)0.0224 (3)
H12B0.60270.50400.40820.027*
C13B0.63813 (17)0.66645 (12)0.47681 (11)0.0187 (3)
H13B0.56660.65360.50970.022*
C14B0.39725 (16)0.80879 (12)0.51552 (10)0.0166 (3)
H14C0.39170.74540.46360.020*
H14D0.32040.84420.48640.020*
C15B0.34895 (17)0.76807 (12)0.59306 (11)0.0187 (3)
H15C0.35990.83200.64630.022*
H15D0.23470.72200.56390.022*
C16B0.83472 (18)1.32504 (12)0.81937 (10)0.0179 (3)
C17B0.7947 (2)1.48136 (13)0.91805 (12)0.0243 (3)
H17C0.87081.53010.90000.029*
H17D0.85271.47870.98270.029*
C18B0.6526 (2)1.52376 (16)0.91910 (15)0.0354 (4)
H18D0.69241.59770.96590.053*
H18E0.57861.47500.93740.053*
H18F0.59601.52560.85470.053*
H1OA1.061 (3)0.9613 (18)0.6519 (16)0.033 (6)*
H1OB0.551 (3)0.753 (2)0.6837 (18)0.048 (7)*
U11U22U33U12U13U23
O1A0.0133 (5)0.0260 (5)0.0181 (5)0.0069 (4)0.0064 (4)0.0070 (4)
O2A0.0197 (5)0.0316 (6)0.0346 (7)0.0082 (5)0.0096 (5)−0.0017 (5)
O3A0.0230 (5)0.0193 (5)0.0255 (6)0.0058 (4)0.0114 (4)0.0006 (4)
N1A0.0137 (5)0.0153 (5)0.0152 (5)0.0043 (4)0.0061 (4)0.0048 (4)
N2A0.0133 (5)0.0161 (5)0.0162 (5)0.0036 (4)0.0058 (4)0.0045 (4)
C1A0.0155 (6)0.0160 (6)0.0139 (6)0.0049 (5)0.0064 (5)0.0055 (5)
C2A0.0146 (6)0.0178 (6)0.0168 (6)0.0031 (5)0.0047 (5)0.0056 (5)
C3A0.0178 (6)0.0164 (6)0.0152 (6)0.0036 (5)0.0055 (5)0.0042 (5)
C4A0.0169 (6)0.0176 (6)0.0142 (6)0.0058 (5)0.0059 (5)0.0056 (5)
C5A0.0140 (6)0.0183 (6)0.0158 (6)0.0046 (5)0.0053 (5)0.0059 (5)
C6A0.0148 (6)0.0162 (6)0.0135 (6)0.0041 (5)0.0048 (5)0.0051 (5)
C7A0.0143 (6)0.0164 (6)0.0144 (6)0.0038 (5)0.0056 (5)0.0061 (5)
C8A0.0141 (6)0.0163 (6)0.0166 (6)0.0051 (5)0.0038 (5)0.0052 (5)
C9A0.0179 (6)0.0194 (7)0.0204 (7)0.0046 (5)0.0077 (5)0.0073 (5)
C10A0.0207 (7)0.0168 (7)0.0262 (7)0.0038 (5)0.0072 (6)0.0076 (6)
C11A0.0223 (7)0.0171 (7)0.0274 (8)0.0052 (6)0.0080 (6)0.0035 (6)
C12A0.0230 (7)0.0211 (7)0.0277 (8)0.0072 (6)0.0137 (6)0.0044 (6)
C13A0.0190 (6)0.0180 (7)0.0215 (7)0.0046 (5)0.0091 (6)0.0054 (5)
C14A0.0131 (6)0.0204 (7)0.0187 (6)0.0060 (5)0.0068 (5)0.0068 (5)
C15A0.0131 (6)0.0211 (7)0.0196 (7)0.0040 (5)0.0071 (5)0.0071 (5)
C16A0.0227 (7)0.0199 (7)0.0163 (6)0.0079 (5)0.0077 (5)0.0049 (5)
C17A0.0333 (8)0.0218 (7)0.0321 (8)0.0130 (6)0.0202 (7)0.0055 (6)
C18A0.0329 (9)0.0348 (9)0.0279 (8)0.0157 (7)0.0129 (7)0.0084 (7)
O1B0.0212 (5)0.0172 (5)0.0204 (5)0.0043 (4)0.0072 (4)0.0073 (4)
O2B0.0185 (5)0.0217 (6)0.0302 (6)0.0023 (4)0.0064 (5)0.0019 (5)
O3B0.0196 (5)0.0198 (5)0.0242 (5)0.0064 (4)0.0088 (4)0.0032 (4)
N1B0.0121 (5)0.0158 (5)0.0157 (5)0.0033 (4)0.0054 (4)0.0057 (4)
N2B0.0138 (5)0.0166 (6)0.0178 (6)0.0048 (4)0.0059 (4)0.0067 (4)
C1B0.0130 (6)0.0158 (6)0.0145 (6)0.0033 (5)0.0046 (5)0.0066 (5)
C2B0.0127 (6)0.0202 (7)0.0169 (6)0.0051 (5)0.0060 (5)0.0072 (5)
C3B0.0160 (6)0.0194 (7)0.0177 (6)0.0065 (5)0.0077 (5)0.0071 (5)
C4B0.0168 (6)0.0156 (6)0.0148 (6)0.0038 (5)0.0060 (5)0.0053 (5)
C5B0.0131 (6)0.0171 (6)0.0163 (6)0.0036 (5)0.0046 (5)0.0073 (5)
C6B0.0127 (6)0.0167 (6)0.0161 (6)0.0049 (5)0.0057 (5)0.0078 (5)
C7B0.0133 (6)0.0172 (6)0.0163 (6)0.0051 (5)0.0055 (5)0.0080 (5)
C8B0.0154 (6)0.0186 (7)0.0173 (6)0.0054 (5)0.0064 (5)0.0063 (5)
C9B0.0247 (7)0.0223 (7)0.0304 (8)0.0085 (6)0.0165 (6)0.0118 (6)
C10B0.0358 (9)0.0295 (8)0.0367 (9)0.0138 (7)0.0267 (8)0.0123 (7)
C11B0.0291 (8)0.0244 (8)0.0288 (8)0.0112 (6)0.0143 (7)0.0038 (6)
C12B0.0209 (7)0.0178 (7)0.0270 (8)0.0052 (5)0.0089 (6)0.0053 (6)
C13B0.0170 (6)0.0190 (7)0.0212 (7)0.0055 (5)0.0081 (5)0.0073 (5)
C14B0.0117 (6)0.0183 (6)0.0177 (6)0.0026 (5)0.0043 (5)0.0054 (5)
C15B0.0160 (6)0.0189 (7)0.0224 (7)0.0032 (5)0.0099 (5)0.0074 (5)
C16B0.0191 (6)0.0175 (6)0.0177 (6)0.0058 (5)0.0069 (5)0.0070 (5)
C17B0.0266 (8)0.0190 (7)0.0251 (8)0.0071 (6)0.0107 (6)0.0022 (6)
C18B0.0384 (10)0.0310 (9)0.0467 (11)0.0165 (8)0.0253 (9)0.0126 (8)
O1A—C15A1.4186 (18)O1B—C15B1.4109 (18)
O1A—H1OA0.81 (2)O1B—H1OB0.98 (3)
O2A—C16A1.2085 (19)O2B—C16B1.2069 (18)
O3A—C16A1.3427 (18)O3B—C16B1.3484 (18)
O3A—C17A1.4564 (18)O3B—C17B1.4463 (19)
N1A—C7A1.3772 (18)N1B—C7B1.3779 (17)
N1A—C1A1.3801 (17)N1B—C1B1.3815 (18)
N1A—C14A1.4647 (18)N1B—C14B1.4563 (17)
N2A—C7A1.3328 (18)N2B—C7B1.3306 (18)
N2A—C6A1.3879 (18)N2B—C6B1.3900 (18)
C1A—C2A1.4007 (19)C1B—C2B1.3953 (19)
C1A—C6A1.4048 (19)C1B—C6B1.4037 (18)
C2A—C3A1.386 (2)C2B—C3B1.384 (2)
C2A—H2AA0.9300C2B—H2BA0.9300
C3A—C4A1.413 (2)C3B—C4B1.408 (2)
C3A—H3AA0.9300C3B—H3BA0.9300
C4A—C5A1.393 (2)C4B—C5B1.3892 (19)
C4A—C16A1.484 (2)C4B—C16B1.488 (2)
C5A—C6A1.3889 (19)C5B—C6B1.3915 (19)
C5A—H5AA0.9300C5B—H5BA0.9300
C7A—C8A1.471 (2)C7B—C8B1.472 (2)
C8A—C13A1.396 (2)C8B—C9B1.398 (2)
C8A—C9A1.4030 (19)C8B—C13B1.402 (2)
C9A—C10A1.384 (2)C9B—C10B1.390 (2)
C9A—H9AA0.9300C9B—H9BA0.9300
C10A—C11A1.387 (2)C10B—C11B1.386 (2)
C10A—H10A0.9300C10B—H10B0.9300
C11A—C12A1.389 (2)C11B—C12B1.388 (2)
C11A—H11A0.9300C11B—H11B0.9300
C12A—C13A1.386 (2)C12B—C13B1.390 (2)
C12A—H12A0.9300C12B—H12B0.9300
C13A—H13A0.9300C13B—H13B0.9300
C14A—C15A1.522 (2)C14B—C15B1.5221 (19)
C14A—H14A0.9700C14B—H14C0.9700
C14A—H14B0.9700C14B—H14D0.9700
C15A—H15A0.9700C15B—H15C0.9700
C15A—H15B0.9700C15B—H15D0.9700
C17A—C18A1.505 (2)C17B—C18B1.504 (2)
C17A—H17A0.9700C17B—H17C0.9700
C17A—H17B0.9700C17B—H17D0.9700
C18A—H18A0.9600C18B—H18D0.9600
C18A—H18B0.9600C18B—H18E0.9600
C18A—H18C0.9600C18B—H18F0.9600
C15A—O1A—H1OA106.6 (15)C15B—O1B—H1OB112.7 (14)
C16A—O3A—C17A115.62 (13)C16B—O3B—C17B116.69 (12)
C7A—N1A—C1A106.75 (11)C7B—N1B—C1B106.88 (11)
C7A—N1A—C14A130.19 (12)C7B—N1B—C14B130.48 (12)
C1A—N1A—C14A123.05 (12)C1B—N1B—C14B122.60 (11)
C7A—N2A—C6A105.31 (11)C7B—N2B—C6B105.39 (11)
N1A—C1A—C2A131.57 (13)N1B—C1B—C2B131.25 (12)
N1A—C1A—C6A105.94 (12)N1B—C1B—C6B105.80 (12)
C2A—C1A—C6A122.46 (13)C2B—C1B—C6B122.93 (13)
C3A—C2A—C1A116.44 (13)C3B—C2B—C1B116.39 (13)
C3A—C2A—H2AA121.8C3B—C2B—H2BA121.8
C1A—C2A—H2AA121.8C1B—C2B—H2BA121.8
C2A—C3A—C4A121.80 (13)C2B—C3B—C4B121.44 (13)
C2A—C3A—H3AA119.1C2B—C3B—H3BA119.3
C4A—C3A—H3AA119.1C4B—C3B—H3BA119.3
C5A—C4A—C3A120.83 (13)C5B—C4B—C3B121.46 (13)
C5A—C4A—C16A117.33 (13)C5B—C4B—C16B117.66 (12)
C3A—C4A—C16A121.83 (13)C3B—C4B—C16B120.88 (13)
C6A—C5A—C4A118.18 (13)C4B—C5B—C6B117.88 (12)
C6A—C5A—H5AA120.9C4B—C5B—H5BA121.1
C4A—C5A—H5AA120.9C6B—C5B—H5BA121.1
N2A—C6A—C5A130.04 (13)N2B—C6B—C5B130.50 (12)
N2A—C6A—C1A109.67 (12)N2B—C6B—C1B109.69 (12)
C5A—C6A—C1A120.28 (13)C5B—C6B—C1B119.80 (12)
N2A—C7A—N1A112.31 (12)N2B—C7B—N1B112.22 (12)
N2A—C7A—C8A121.48 (12)N2B—C7B—C8B122.11 (12)
N1A—C7A—C8A125.92 (12)N1B—C7B—C8B125.54 (12)
C13A—C8A—C9A118.79 (13)C9B—C8B—C13B119.22 (13)
C13A—C8A—C7A124.62 (13)C9B—C8B—C7B117.73 (13)
C9A—C8A—C7A116.59 (12)C13B—C8B—C7B123.04 (12)
C10A—C9A—C8A120.72 (14)C10B—C9B—C8B120.14 (14)
C10A—C9A—H9AA119.6C10B—C9B—H9BA119.9
C8A—C9A—H9AA119.6C8B—C9B—H9BA119.9
C9A—C10A—C11A119.98 (14)C11B—C10B—C9B120.35 (15)
C9A—C10A—H10A120.0C11B—C10B—H10B119.8
C11A—C10A—H10A120.0C9B—C10B—H10B119.8
C10A—C11A—C12A119.75 (14)C10B—C11B—C12B119.94 (15)
C10A—C11A—H11A120.1C10B—C11B—H11B120.0
C12A—C11A—H11A120.1C12B—C11B—H11B120.0
C13A—C12A—C11A120.63 (14)C11B—C12B—C13B120.24 (14)
C13A—C12A—H12A119.7C11B—C12B—H12B119.9
C11A—C12A—H12A119.7C13B—C12B—H12B119.9
C12A—C13A—C8A120.08 (13)C12B—C13B—C8B120.10 (13)
C12A—C13A—H13A120.0C12B—C13B—H13B120.0
C8A—C13A—H13A120.0C8B—C13B—H13B120.0
N1A—C14A—C15A112.25 (11)N1B—C14B—C15B111.15 (11)
N1A—C14A—H14A109.2N1B—C14B—H14C109.4
C15A—C14A—H14A109.2C15B—C14B—H14C109.4
N1A—C14A—H14B109.2N1B—C14B—H14D109.4
C15A—C14A—H14B109.2C15B—C14B—H14D109.4
H14A—C14A—H14B107.9H14C—C14B—H14D108.0
O1A—C15A—C14A113.10 (12)O1B—C15B—C14B112.51 (11)
O1A—C15A—H15A109.0O1B—C15B—H15C109.1
C14A—C15A—H15A109.0C14B—C15B—H15C109.1
O1A—C15A—H15B109.0O1B—C15B—H15D109.1
C14A—C15A—H15B109.0C14B—C15B—H15D109.1
H15A—C15A—H15B107.8H15C—C15B—H15D107.8
O2A—C16A—O3A123.39 (14)O2B—C16B—O3B123.64 (14)
O2A—C16A—C4A123.88 (14)O2B—C16B—C4B124.81 (14)
O3A—C16A—C4A112.73 (13)O3B—C16B—C4B111.55 (12)
O3A—C17A—C18A112.42 (14)O3B—C17B—C18B106.85 (14)
O3A—C17A—H17A109.1O3B—C17B—H17C110.4
C18A—C17A—H17A109.1C18B—C17B—H17C110.4
O3A—C17A—H17B109.1O3B—C17B—H17D110.4
C18A—C17A—H17B109.1C18B—C17B—H17D110.4
H17A—C17A—H17B107.9H17C—C17B—H17D108.6
C17A—C18A—H18A109.5C17B—C18B—H18D109.5
C17A—C18A—H18B109.5C17B—C18B—H18E109.5
H18A—C18A—H18B109.5H18D—C18B—H18E109.5
C17A—C18A—H18C109.5C17B—C18B—H18F109.5
H18A—C18A—H18C109.5H18D—C18B—H18F109.5
H18B—C18A—H18C109.5H18E—C18B—H18F109.5
C7A—N1A—C1A—C2A176.50 (14)C7B—N1B—C1B—C2B177.03 (14)
C14A—N1A—C1A—C2A−4.2 (2)C14B—N1B—C1B—C2B−5.3 (2)
C7A—N1A—C1A—C6A−1.25 (14)C7B—N1B—C1B—C6B−1.51 (14)
C14A—N1A—C1A—C6A178.06 (12)C14B—N1B—C1B—C6B176.20 (11)
N1A—C1A—C2A—C3A−178.13 (13)N1B—C1B—C2B—C3B179.89 (13)
C6A—C1A—C2A—C3A−0.7 (2)C6B—C1B—C2B—C3B−1.8 (2)
C1A—C2A—C3A—C4A−0.4 (2)C1B—C2B—C3B—C4B−1.0 (2)
C2A—C3A—C4A—C5A1.0 (2)C2B—C3B—C4B—C5B1.9 (2)
C2A—C3A—C4A—C16A−178.65 (13)C2B—C3B—C4B—C16B−176.95 (13)
C3A—C4A—C5A—C6A−0.5 (2)C3B—C4B—C5B—C6B0.0 (2)
C16A—C4A—C5A—C6A179.14 (12)C16B—C4B—C5B—C6B178.85 (12)
C7A—N2A—C6A—C5A−178.09 (14)C7B—N2B—C6B—C5B178.20 (14)
C7A—N2A—C6A—C1A0.21 (15)C7B—N2B—C6B—C1B−0.70 (15)
C4A—C5A—C6A—N2A177.63 (13)C4B—C5B—C6B—N2B178.57 (13)
C4A—C5A—C6A—C1A−0.5 (2)C4B—C5B—C6B—C1B−2.63 (19)
N1A—C1A—C6A—N2A0.67 (15)N1B—C1B—C6B—N2B1.40 (14)
C2A—C1A—C6A—N2A−177.34 (12)C2B—C1B—C6B—N2B−177.30 (12)
N1A—C1A—C6A—C5A179.17 (12)N1B—C1B—C6B—C5B−177.64 (12)
C2A—C1A—C6A—C5A1.2 (2)C2B—C1B—C6B—C5B3.7 (2)
C6A—N2A—C7A—N1A−1.05 (15)C6B—N2B—C7B—N1B−0.29 (15)
C6A—N2A—C7A—C8A173.07 (12)C6B—N2B—C7B—C8B175.92 (12)
C1A—N1A—C7A—N2A1.49 (15)C1B—N1B—C7B—N2B1.17 (15)
C14A—N1A—C7A—N2A−177.76 (12)C14B—N1B—C7B—N2B−176.30 (12)
C1A—N1A—C7A—C8A−172.31 (12)C1B—N1B—C7B—C8B−174.89 (12)
C14A—N1A—C7A—C8A8.4 (2)C14B—N1B—C7B—C8B7.6 (2)
N2A—C7A—C8A—C13A145.39 (14)N2B—C7B—C8B—C9B−37.4 (2)
N1A—C7A—C8A—C13A−41.3 (2)N1B—C7B—C8B—C9B138.34 (15)
N2A—C7A—C8A—C9A−33.94 (19)N2B—C7B—C8B—C13B141.16 (14)
N1A—C7A—C8A—C9A139.34 (14)N1B—C7B—C8B—C13B−43.1 (2)
C13A—C8A—C9A—C10A2.0 (2)C13B—C8B—C9B—C10B0.0 (2)
C7A—C8A—C9A—C10A−178.61 (13)C7B—C8B—C9B—C10B178.61 (15)
C8A—C9A—C10A—C11A0.1 (2)C8B—C9B—C10B—C11B1.1 (3)
C9A—C10A—C11A—C12A−1.8 (2)C9B—C10B—C11B—C12B−1.4 (3)
C10A—C11A—C12A—C13A1.3 (2)C10B—C11B—C12B—C13B0.6 (3)
C11A—C12A—C13A—C8A0.9 (2)C11B—C12B—C13B—C8B0.5 (2)
C9A—C8A—C13A—C12A−2.5 (2)C9B—C8B—C13B—C12B−0.8 (2)
C7A—C8A—C13A—C12A178.16 (14)C7B—C8B—C13B—C12B−179.33 (13)
C7A—N1A—C14A—C15A102.15 (16)C7B—N1B—C14B—C15B104.85 (16)
C1A—N1A—C14A—C15A−76.99 (16)C1B—N1B—C14B—C15B−72.28 (16)
N1A—C14A—C15A—O1A−69.79 (15)N1B—C14B—C15B—O1B−64.92 (15)
C17A—O3A—C16A—O2A−0.9 (2)C17B—O3B—C16B—O2B−1.5 (2)
C17A—O3A—C16A—C4A178.92 (12)C17B—O3B—C16B—C4B178.76 (12)
C5A—C4A—C16A—O2A−6.3 (2)C5B—C4B—C16B—O2B3.6 (2)
C3A—C4A—C16A—O2A173.36 (14)C3B—C4B—C16B—O2B−177.50 (14)
C5A—C4A—C16A—O3A173.93 (12)C5B—C4B—C16B—O3B−176.65 (12)
C3A—C4A—C16A—O3A−6.43 (19)C3B—C4B—C16B—O3B2.24 (19)
C16A—O3A—C17A—C18A73.83 (18)C16B—O3B—C17B—C18B167.61 (13)
D—H···AD—HH···AD···AD—H···A
O1A—H1OA···N2B0.81 (3)1.96 (3)2.7700 (19)177 (3)
O1B—H1OB···N2A0.98 (3)1.89 (3)2.8680 (18)177 (2)
C2B—H2BA···O1Ai0.932.423.238 (2)146
C12B—H12B···O1Bii0.932.553.416 (2)155
C13A—H13A···O1A0.932.403.273 (2)157
C13B—H13B···O1B0.932.433.300 (2)155
C15A—H15B···O2Aiii0.972.533.135 (2)120
C17B—H17D···O2Biv0.972.543.282 (2)133
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1A—H1OA⋯N2B0.81 (3)1.96 (3)2.7700 (19)177 (3)
O1B—H1OB⋯N2A0.98 (3)1.89 (3)2.8680 (18)177 (2)
C2B—H2BA⋯O1Ai0.932.423.238 (2)146
C12B—H12B⋯O1Bii0.932.553.416 (2)155
C13A—H13A⋯O1A0.932.403.273 (2)157
C13B—H13B⋯O1B0.932.433.300 (2)155
C15A—H15B⋯O2Aiii0.972.533.135 (2)120
C17B—H17D⋯O2Biv0.972.543.282 (2)133

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Review 1.  The combinatorial synthesis of bicyclic privileged structures or privileged substructures.

Authors:  Douglas A Horton; Gregory T Bourne; Mark L Smythe
Journal:  Chem Rev       Date:  2003-03       Impact factor: 60.622

Review 2.  Privileged structures: applications in drug discovery.

Authors:  R W DeSimone; K S Currie; S A Mitchell; J W Darrow; D A Pippin
Journal:  Comb Chem High Throughput Screen       Date:  2004-08       Impact factor: 1.339

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Synthesis and biological evaluation of novel 1-(4-methoxyphenethyl)-1H-benzimidazole-5-carboxylic acid derivatives and their precursors as antileukemic agents.

Authors:  N R Thimme Gowda; C V Kavitha; Kishore K Chiruvella; Omana Joy; Kanchugarakoppal S Rangappa; Sathees C Raghavan
Journal:  Bioorg Med Chem Lett       Date:  2009-07-04       Impact factor: 2.823

5.  In-vivo analgesic and anti-inflammatory activities of newly synthesized benzimidazole derivatives.

Authors:  Kavitha C S Achar; Kallappa M Hosamani; Harisha R Seetharamareddy
Journal:  Eur J Med Chem       Date:  2010-01-21       Impact factor: 6.514

6.  Ethyl 1-tert-butyl-2-(4-hydr-oxy-3-methoxy-phen-yl)-1H-benzimidazole-5-carboxyl-ate.

Authors:  Natarajan Arumugam; Aisyah Saad Abdul Rahim; Hasnah Osman; Mohd Mustaqim Rosli; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-10

7.  Synthesis and in vitro antimicrobial activity of some novel substituted benzimidazole derivatives having potent activity against MRSA.

Authors:  Meral Tunçbilek; Tuluğ Kiper; Nurten Altanlar
Journal:  Eur J Med Chem       Date:  2008-07-04       Impact factor: 6.514

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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1.  Ethyl 1-(2-hy-droxy-eth-yl)-2-[2-(methyl-sulfan-yl)eth-yl]-1H-benzimidazole-5-carboxyl-ate.

Authors:  Nurasyikin Hamzah; Nurziana Ngah; Shafida Abd Hamid; Aisyah Saad Abdul Rahim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-12-21
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