| Literature DB >> 21587996 |
Naki Colak, Yılmaz Yıldırır, Barış Tercan, Emel Ermiş, Tuncer Hökelek.
Abstract
In the title compound, C(13)H(11)N(3)O(4), theEntities:
Year: 2010 PMID: 21587996 PMCID: PMC3007023 DOI: 10.1107/S1600536810024025
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H11N3O4 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4103 reflections |
| θ = 2.6–28.4° | |
| µ = 0.11 mm−1 | |
| β = 93.796 (1)° | Block, yellow |
| 0.46 × 0.43 × 0.29 mm | |
| Bruker Kappa APEXII CCD area-detector diffractometer | 3098 independent reflections |
| Radiation source: fine-focus sealed tube | 2591 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.5°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 11746 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 3098 reflections | (Δ/σ)max = 0.001 |
| 225 parameters | Δρmax = 0.38 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.16363 (8) | 0.74524 (7) | 0.85585 (7) | 0.0172 (2) | |
| O2 | 0.17892 (8) | 0.56739 (7) | 0.97179 (7) | 0.01470 (19) | |
| O3 | 0.35656 (9) | 0.44276 (8) | 0.96914 (7) | 0.0187 (2) | |
| O4 | 0.32521 (9) | 0.79574 (8) | 0.73794 (8) | 0.0249 (2) | |
| N1 | 0.44403 (10) | 0.56888 (9) | 0.76510 (9) | 0.0165 (2) | |
| N2 | 0.51381 (10) | 0.46953 (9) | 0.78943 (9) | 0.0159 (2) | |
| H2 | 0.4942 (16) | 0.4243 (15) | 0.8538 (15) | 0.028 (4)* | |
| N3 | 1.03756 (11) | 0.29578 (10) | 0.47015 (10) | 0.0232 (2) | |
| C1 | 0.08704 (11) | 0.64589 (10) | 0.90176 (10) | 0.0143 (2) | |
| C2 | 0.27845 (12) | 0.71950 (11) | 0.79881 (10) | 0.0172 (2) | |
| C3 | 0.34022 (12) | 0.59901 (10) | 0.82608 (10) | 0.0155 (2) | |
| C4 | 0.29477 (11) | 0.52812 (10) | 0.92521 (10) | 0.0144 (2) | |
| C5 | 0.62374 (11) | 0.43844 (10) | 0.72180 (10) | 0.0148 (2) | |
| C6 | 0.64458 (13) | 0.49922 (11) | 0.61746 (10) | 0.0173 (2) | |
| H6 | 0.5852 (15) | 0.5636 (14) | 0.5904 (13) | 0.020 (4)* | |
| C7 | 0.75216 (13) | 0.46401 (11) | 0.55177 (10) | 0.0175 (2) | |
| H7 | 0.7668 (15) | 0.5059 (14) | 0.4788 (13) | 0.024 (4)* | |
| C8 | 0.83788 (12) | 0.36875 (11) | 0.59035 (10) | 0.0155 (2) | |
| C9 | 0.81720 (12) | 0.30898 (11) | 0.69557 (10) | 0.0161 (2) | |
| H9 | 0.8752 (14) | 0.2457 (14) | 0.7224 (12) | 0.020 (4)* | |
| C10 | 0.70992 (12) | 0.34407 (11) | 0.76131 (10) | 0.0159 (2) | |
| H10 | 0.6926 (14) | 0.3023 (14) | 0.8350 (13) | 0.021 (4)* | |
| C11 | 0.01442 (13) | 0.57371 (11) | 0.80405 (10) | 0.0178 (2) | |
| H111 | 0.0795 (15) | 0.5338 (14) | 0.7556 (13) | 0.022 (4)* | |
| H112 | −0.0444 (15) | 0.5101 (14) | 0.8393 (13) | 0.023 (4)* | |
| H113 | −0.0456 (15) | 0.6270 (15) | 0.7544 (14) | 0.026 (4)* | |
| C12 | −0.00717 (13) | 0.70098 (11) | 0.98606 (10) | 0.0169 (2) | |
| H121 | 0.0494 (16) | 0.7364 (15) | 1.0534 (13) | 0.026 (4)* | |
| H122 | −0.0616 (15) | 0.7636 (14) | 0.9446 (13) | 0.021 (4)* | |
| H123 | −0.0673 (16) | 0.6388 (16) | 1.0133 (15) | 0.035 (4)* | |
| C13 | 0.94875 (12) | 0.32918 (11) | 0.52248 (10) | 0.0177 (2) |
| O1 | 0.0168 (4) | 0.0111 (4) | 0.0244 (4) | 0.0003 (3) | 0.0057 (3) | 0.0024 (3) |
| O2 | 0.0132 (4) | 0.0139 (4) | 0.0169 (4) | 0.0027 (3) | 0.0012 (3) | 0.0015 (3) |
| O3 | 0.0164 (4) | 0.0178 (4) | 0.0220 (4) | 0.0033 (3) | 0.0011 (3) | 0.0027 (3) |
| O4 | 0.0244 (5) | 0.0191 (5) | 0.0321 (5) | 0.0004 (4) | 0.0096 (4) | 0.0083 (4) |
| N1 | 0.0144 (5) | 0.0146 (5) | 0.0204 (5) | −0.0002 (4) | 0.0009 (4) | −0.0023 (4) |
| N2 | 0.0151 (5) | 0.0149 (5) | 0.0179 (5) | 0.0004 (4) | 0.0031 (4) | −0.0005 (4) |
| N3 | 0.0227 (6) | 0.0233 (6) | 0.0244 (5) | 0.0003 (4) | 0.0076 (4) | 0.0001 (4) |
| C1 | 0.0135 (5) | 0.0111 (5) | 0.0182 (5) | 0.0005 (4) | 0.0010 (4) | 0.0024 (4) |
| C2 | 0.0152 (6) | 0.0159 (6) | 0.0208 (5) | −0.0001 (4) | 0.0025 (4) | −0.0003 (4) |
| C3 | 0.0143 (5) | 0.0140 (5) | 0.0184 (5) | −0.0005 (4) | 0.0017 (4) | −0.0006 (4) |
| C4 | 0.0127 (5) | 0.0135 (5) | 0.0170 (5) | −0.0010 (4) | 0.0008 (4) | −0.0027 (4) |
| C5 | 0.0119 (5) | 0.0143 (5) | 0.0182 (5) | −0.0024 (4) | 0.0014 (4) | −0.0037 (4) |
| C6 | 0.0178 (6) | 0.0137 (5) | 0.0205 (5) | −0.0001 (4) | 0.0014 (4) | 0.0001 (4) |
| C7 | 0.0196 (6) | 0.0155 (5) | 0.0178 (5) | −0.0026 (4) | 0.0039 (4) | 0.0004 (4) |
| C8 | 0.0134 (5) | 0.0155 (5) | 0.0179 (5) | −0.0031 (4) | 0.0028 (4) | −0.0022 (4) |
| C9 | 0.0137 (5) | 0.0160 (5) | 0.0185 (5) | 0.0003 (4) | 0.0001 (4) | −0.0002 (4) |
| C10 | 0.0144 (5) | 0.0177 (5) | 0.0155 (5) | −0.0026 (4) | 0.0010 (4) | −0.0004 (4) |
| C11 | 0.0174 (6) | 0.0170 (6) | 0.0188 (5) | 0.0019 (5) | −0.0009 (4) | −0.0015 (4) |
| C12 | 0.0162 (6) | 0.0141 (5) | 0.0207 (5) | 0.0032 (4) | 0.0037 (4) | 0.0007 (4) |
| C13 | 0.0178 (6) | 0.0167 (6) | 0.0188 (5) | −0.0029 (4) | 0.0024 (4) | 0.0006 (4) |
| O1—C1 | 1.4435 (13) | C6—C7 | 1.3878 (16) |
| O1—C2 | 1.3645 (13) | C6—H6 | 0.954 (15) |
| O2—C1 | 1.4493 (13) | C7—C8 | 1.3949 (17) |
| O2—C4 | 1.3533 (13) | C7—H7 | 0.974 (15) |
| O3—C4 | 1.2081 (14) | C8—C9 | 1.4012 (16) |
| O4—C2 | 1.2009 (14) | C8—C13 | 1.4418 (15) |
| N1—N2 | 1.3082 (14) | C9—C10 | 1.3854 (15) |
| N1—C3 | 1.3116 (14) | C9—H9 | 0.936 (15) |
| N2—C5 | 1.4075 (14) | C10—H10 | 0.986 (15) |
| N2—H2 | 0.922 (17) | C11—C1 | 1.5117 (16) |
| N3—C13 | 1.1473 (15) | C11—H111 | 0.976 (15) |
| C1—C12 | 1.5055 (15) | C11—H113 | 0.984 (16) |
| C2—C3 | 1.4812 (16) | C11—H112 | 1.007 (16) |
| C3—C4 | 1.4718 (15) | C12—H122 | 0.975 (15) |
| C5—C6 | 1.3981 (16) | C12—H121 | 0.999 (16) |
| C5—C10 | 1.3932 (17) | C12—H123 | 0.967 (17) |
| C2—O1—C1 | 118.66 (9) | C7—C6—H6 | 119.7 (9) |
| C4—O2—C1 | 118.29 (8) | C6—C7—C8 | 119.80 (11) |
| N2—N1—C3 | 120.47 (10) | C6—C7—H7 | 119.6 (9) |
| N1—N2—C5 | 119.38 (10) | C8—C7—H7 | 120.6 (9) |
| N1—N2—H2 | 119.3 (10) | C7—C8—C9 | 120.56 (10) |
| C5—N2—H2 | 121.1 (10) | C7—C8—C13 | 120.76 (10) |
| O1—C1—O2 | 109.71 (9) | C9—C8—C13 | 118.68 (11) |
| O1—C1—C11 | 110.85 (9) | C8—C9—H9 | 120.9 (9) |
| O1—C1—C12 | 106.43 (9) | C10—C9—C8 | 119.72 (11) |
| O2—C1—C11 | 109.92 (9) | C10—C9—H9 | 119.4 (9) |
| O2—C1—C12 | 105.40 (9) | C5—C10—H10 | 119.5 (9) |
| C12—C1—C11 | 114.31 (10) | C9—C10—C5 | 119.50 (10) |
| O1—C2—C3 | 114.85 (10) | C9—C10—H10 | 121.0 (9) |
| O4—C2—O1 | 119.33 (11) | C1—C11—H111 | 111.6 (9) |
| O4—C2—C3 | 125.66 (11) | C1—C11—H113 | 110.4 (9) |
| N1—C3—C2 | 115.57 (10) | C1—C11—H112 | 108.6 (9) |
| N1—C3—C4 | 124.16 (11) | H111—C11—H112 | 109.0 (12) |
| C4—C3—C2 | 119.88 (10) | H111—C11—H113 | 108.9 (13) |
| O2—C4—C3 | 116.02 (10) | H113—C11—H112 | 108.3 (12) |
| O3—C4—O2 | 119.38 (10) | C1—C12—H121 | 108.9 (9) |
| O3—C4—C3 | 124.52 (10) | C1—C12—H122 | 107.9 (8) |
| C6—C5—N2 | 121.03 (11) | C1—C12—H123 | 109.4 (10) |
| C10—C5—N2 | 117.89 (10) | H121—C12—H123 | 110.0 (13) |
| C10—C5—C6 | 121.08 (10) | H122—C12—H121 | 110.9 (13) |
| C5—C6—H6 | 120.9 (9) | H122—C12—H123 | 109.6 (13) |
| C7—C6—C5 | 119.34 (11) | N3—C13—C8 | 178.56 (13) |
| C2—O1—C1—O2 | 51.23 (12) | O4—C2—C3—N1 | −9.81 (19) |
| C2—O1—C1—C11 | −70.35 (13) | O4—C2—C3—C4 | 163.35 (12) |
| C2—O1—C1—C12 | 164.79 (10) | N1—C3—C4—O2 | −174.73 (10) |
| C1—O1—C2—O4 | 163.20 (11) | N1—C3—C4—O3 | 8.59 (19) |
| C1—O1—C2—C3 | −21.07 (14) | C2—C3—C4—O2 | 12.73 (16) |
| C4—O2—C1—O1 | −50.36 (12) | C2—C3—C4—O3 | −163.95 (11) |
| C4—O2—C1—C12 | −164.59 (9) | N2—C5—C6—C7 | −178.47 (10) |
| C4—O2—C1—C11 | 71.77 (12) | C10—C5—C6—C7 | 0.62 (18) |
| C1—O2—C4—O3 | −163.46 (10) | N2—C5—C10—C9 | 178.44 (10) |
| C1—O2—C4—C3 | 19.68 (14) | C6—C5—C10—C9 | −0.67 (18) |
| C3—N1—N2—C5 | 179.24 (10) | C5—C6—C7—C8 | 0.05 (18) |
| N2—N1—C3—C2 | 173.80 (10) | C6—C7—C8—C9 | −0.65 (18) |
| N2—N1—C3—C4 | 0.97 (18) | C6—C7—C8—C13 | 178.87 (11) |
| N1—N2—C5—C6 | −11.37 (17) | C7—C8—C9—C10 | 0.60 (18) |
| N1—N2—C5—C10 | 169.52 (10) | C13—C8—C9—C10 | −178.93 (11) |
| O1—C2—C3—N1 | 174.77 (10) | C8—C9—C10—C5 | 0.06 (17) |
| O1—C2—C3—C4 | −12.07 (16) |
| Cg1 is the centroid of the C5–C10 ring. |
| H··· | ||||
| N2—H2···O3 | 0.92 (2) | 1.958 (16) | 2.6674 (13) | 132 (1) |
| C9—H9···N1i | 0.94 (2) | 2.624 (15) | 3.5320 (16) | 164 (1) |
| C10—H10···N3ii | 0.99 (2) | 2.485 (15) | 3.3876 (16) | 152 (1) |
| C12—H123···O2iii | 0.97 (2) | 2.527 (17) | 3.4454 (15) | 159 (1) |
| C12—H122···Cg1iv | 0.98 (2) | 2.491 (15) | 3.4575 (13) | 171 (1) |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C5–C10 ring.
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2⋯O3 | 0.92 (2) | 1.958 (16) | 2.6674 (13) | 132 (1) |
| C9—H9⋯N1i | 0.94 (2) | 2.624 (15) | 3.5320 (16) | 164 (1) |
| C10—H10⋯N3ii | 0.99 (2) | 2.485 (15) | 3.3876 (16) | 152 (1) |
| C12—H123⋯O2iii | 0.97 (2) | 2.527 (17) | 3.4454 (15) | 159 (1) |
| C12—H122⋯ | 0.98 (2) | 2.491 (15) | 3.4575 (13) | 171 (1) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .