| Literature DB >> 21587958 |
Zhouqin Xu, Qiang Wang, Yanchun Sun.
Abstract
In the title compound, C(15)H(26)O(6)Si, the dioxa six-membered ring bonded to the myo-inositol skeleton is in a boat conformation while the rest of the six-membered rings adopt chair conformations.Entities:
Year: 2010 PMID: 21587958 PMCID: PMC3006906 DOI: 10.1107/S1600536810023214
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H26O6Si | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3612 reflections |
| θ = 2.3–18.5° | |
| µ = 0.16 mm−1 | |
| Block, colorless | |
| 0.22 × 0.21 × 0.17 mm |
| Bruker APEXII CCD area-detector diffractometer | 4060 independent reflections |
| Radiation source: fine-focus sealed tube | 2035 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.6°, θmin = 1.6° |
| Absorption correction: multi-scan ( | |
| 55999 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4060 reflections | (Δ/σ)max = 0.001 |
| 205 parameters | Δρmax = 0.24 e Å−3 |
| 18 restraints | Δρmin = −0.23 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 1.0701 (3) | 0.6537 (3) | 0.59939 (13) | 0.0839 (10) | |
| H1A | 1.1352 | 0.6900 | 0.5848 | 0.126* | |
| H1B | 1.0112 | 0.7110 | 0.6013 | 0.126* | |
| H1C | 1.0473 | 0.5886 | 0.5778 | 0.126* | |
| C2 | 1.0960 (2) | 0.6094 (2) | 0.65278 (12) | 0.0623 (8) | |
| H2 | 1.1226 | 0.6746 | 0.6747 | 0.075* | |
| C3 | 1.2002 (2) | 0.4541 (3) | 0.69423 (11) | 0.0606 (8) | |
| H3 | 1.2794 | 0.4578 | 0.7032 | 0.073* | |
| C4 | 1.0113 (2) | 0.4980 (2) | 0.72188 (10) | 0.0525 (6) | |
| H4 | 0.9641 | 0.5327 | 0.7490 | 0.063* | |
| C5 | 1.1318 (2) | 0.4988 (3) | 0.73907 (11) | 0.0615 (7) | |
| H5 | 1.1545 | 0.5797 | 0.7481 | 0.074* | |
| C6 | 1.1663 (2) | 0.3251 (2) | 0.68424 (10) | 0.0565 (7) | |
| H6 | 1.2134 | 0.2913 | 0.6569 | 0.068* | |
| C7 | 0.9784 (2) | 0.3686 (2) | 0.71229 (10) | 0.0475 (6) | |
| H7 | 0.8989 | 0.3641 | 0.7041 | 0.057* | |
| C8 | 1.0450 (2) | 0.3186 (2) | 0.66778 (10) | 0.0477 (6) | |
| H8 | 1.0333 | 0.3668 | 0.6365 | 0.057* | |
| C9 | 1.1140 (3) | 0.3057 (3) | 0.77096 (12) | 0.0663 (8) | |
| H9 | 1.1255 | 0.2570 | 0.8021 | 0.080* | |
| C10 | 1.0905 (3) | 0.2103 (4) | 0.55151 (14) | 0.1063 (13) | |
| H10A | 1.0859 | 0.2952 | 0.5534 | 0.160* | |
| H10B | 1.0710 | 0.1847 | 0.5171 | 0.160* | |
| H10C | 1.1651 | 0.1856 | 0.5593 | 0.160* | |
| C11 | 1.0206 (3) | −0.0159 (3) | 0.60583 (12) | 0.0748 (9) | |
| H11A | 1.0988 | −0.0286 | 0.6111 | 0.112* | |
| H11B | 0.9973 | −0.0561 | 0.5748 | 0.112* | |
| H11C | 0.9800 | −0.0465 | 0.6351 | 0.112* | |
| C12 | 0.8465 (3) | 0.1719 (3) | 0.57919 (11) | 0.0673 (8) | |
| C13 | 0.8201 (3) | 0.1084 (3) | 0.52793 (12) | 0.0919 (11) | |
| H13A | 0.7429 | 0.1190 | 0.5196 | 0.138* | |
| H13B | 0.8359 | 0.0254 | 0.5315 | 0.138* | |
| H13C | 0.8651 | 0.1411 | 0.5006 | 0.138* | |
| C14 | 0.7693 (3) | 0.1210 (4) | 0.62207 (15) | 0.1046 (12) | |
| H14A | 0.7834 | 0.1612 | 0.6543 | 0.157* | |
| H14B | 0.7837 | 0.0378 | 0.6262 | 0.157* | |
| H14C | 0.6930 | 0.1324 | 0.6122 | 0.157* | |
| C15 | 0.8231 (4) | 0.3032 (3) | 0.57262 (19) | 0.141 (2) | |
| H15A | 0.7474 | 0.3141 | 0.5618 | 0.212* | |
| H15B | 0.8722 | 0.3354 | 0.5468 | 0.212* | |
| H15C | 0.8351 | 0.3431 | 0.6052 | 0.212* | |
| O1 | 0.99714 (14) | 0.56100 (14) | 0.67385 (7) | 0.0554 (5) | |
| O2 | 1.18006 (14) | 0.52151 (17) | 0.64779 (7) | 0.0621 (5) | |
| O3 | 1.14699 (17) | 0.42203 (18) | 0.78300 (7) | 0.0728 (6) | |
| O4 | 1.00096 (16) | 0.30181 (15) | 0.75876 (7) | 0.0584 (5) | |
| O5 | 1.18069 (15) | 0.25908 (18) | 0.73137 (8) | 0.0689 (6) | |
| O6 | 1.01461 (16) | 0.19916 (15) | 0.65769 (7) | 0.0610 (5) | |
| Si1 | 0.99324 (6) | 0.14381 (6) | 0.59918 (3) | 0.0530 (2) |
| C1 | 0.081 (2) | 0.074 (2) | 0.096 (3) | 0.0003 (17) | 0.0099 (19) | 0.032 (2) |
| C2 | 0.0583 (17) | 0.0506 (16) | 0.078 (2) | −0.0097 (14) | 0.0084 (15) | 0.0002 (15) |
| C3 | 0.0401 (15) | 0.077 (2) | 0.0650 (18) | −0.0088 (14) | −0.0059 (13) | 0.0029 (16) |
| C4 | 0.0549 (16) | 0.0477 (14) | 0.0550 (17) | −0.0024 (12) | 0.0088 (13) | −0.0084 (13) |
| C5 | 0.0650 (18) | 0.0632 (18) | 0.0563 (18) | −0.0168 (15) | −0.0026 (14) | −0.0060 (15) |
| C6 | 0.0492 (15) | 0.0673 (18) | 0.0531 (17) | 0.0093 (14) | 0.0019 (13) | −0.0007 (14) |
| C7 | 0.0458 (15) | 0.0451 (14) | 0.0515 (16) | −0.0045 (11) | −0.0005 (12) | −0.0021 (12) |
| C8 | 0.0507 (15) | 0.0432 (14) | 0.0491 (16) | −0.0002 (11) | −0.0029 (12) | −0.0048 (12) |
| C9 | 0.072 (2) | 0.070 (2) | 0.0565 (18) | −0.0023 (16) | −0.0084 (16) | 0.0069 (16) |
| C10 | 0.121 (3) | 0.112 (3) | 0.086 (3) | −0.040 (2) | 0.038 (2) | −0.020 (2) |
| C11 | 0.093 (2) | 0.0545 (17) | 0.077 (2) | 0.0151 (16) | −0.0045 (17) | −0.0142 (15) |
| C12 | 0.0784 (19) | 0.0668 (17) | 0.0567 (17) | 0.0118 (15) | −0.0106 (15) | −0.0052 (14) |
| C13 | 0.104 (2) | 0.096 (2) | 0.076 (2) | 0.0068 (19) | −0.0219 (18) | −0.0122 (18) |
| C14 | 0.072 (2) | 0.142 (3) | 0.100 (2) | 0.008 (2) | 0.0024 (19) | −0.005 (2) |
| C15 | 0.178 (5) | 0.084 (3) | 0.162 (4) | 0.060 (3) | −0.091 (4) | −0.026 (3) |
| O1 | 0.0522 (10) | 0.0465 (10) | 0.0677 (12) | −0.0015 (8) | 0.0059 (9) | 0.0021 (9) |
| O2 | 0.0495 (11) | 0.0730 (12) | 0.0639 (12) | −0.0066 (9) | 0.0089 (9) | 0.0042 (11) |
| O3 | 0.0812 (14) | 0.0844 (15) | 0.0527 (12) | −0.0182 (11) | −0.0141 (10) | −0.0024 (11) |
| O4 | 0.0626 (12) | 0.0582 (11) | 0.0544 (12) | −0.0061 (9) | 0.0037 (9) | 0.0049 (9) |
| O5 | 0.0637 (12) | 0.0759 (13) | 0.0671 (14) | 0.0167 (10) | −0.0079 (10) | 0.0074 (11) |
| O6 | 0.0870 (14) | 0.0419 (10) | 0.0543 (11) | −0.0050 (9) | −0.0042 (10) | −0.0059 (8) |
| Si1 | 0.0636 (5) | 0.0452 (4) | 0.0502 (5) | −0.0004 (4) | 0.0056 (4) | −0.0067 (3) |
| C1—C2 | 1.493 (4) | C9—O5 | 1.397 (3) |
| C1—H1A | 0.9600 | C9—O3 | 1.406 (3) |
| C1—H1B | 0.9600 | C9—H9 | 0.9800 |
| C1—H1C | 0.9600 | C10—Si1 | 1.852 (3) |
| C2—O1 | 1.415 (3) | C10—H10A | 0.9600 |
| C2—O2 | 1.421 (3) | C10—H10B | 0.9600 |
| C2—H2 | 0.9800 | C10—H10C | 0.9600 |
| C3—O2 | 1.436 (3) | C11—Si1 | 1.840 (3) |
| C3—C5 | 1.502 (4) | C11—H11A | 0.9600 |
| C3—C6 | 1.533 (4) | C11—H11B | 0.9600 |
| C3—H3 | 0.9800 | C11—H11C | 0.9600 |
| C4—O1 | 1.434 (3) | C12—C15 | 1.516 (4) |
| C4—C5 | 1.513 (4) | C12—C13 | 1.532 (4) |
| C4—C7 | 1.533 (3) | C12—C14 | 1.550 (5) |
| C4—H4 | 0.9800 | C12—Si1 | 1.864 (3) |
| C5—O3 | 1.434 (3) | C13—H13A | 0.9600 |
| C5—H5 | 0.9800 | C13—H13B | 0.9600 |
| C6—O5 | 1.432 (3) | C13—H13C | 0.9600 |
| C6—C8 | 1.520 (3) | C14—H14A | 0.9600 |
| C6—H6 | 0.9800 | C14—H14B | 0.9600 |
| C7—O4 | 1.437 (3) | C14—H14C | 0.9600 |
| C7—C8 | 1.505 (3) | C15—H15A | 0.9600 |
| C7—H7 | 0.9800 | C15—H15B | 0.9600 |
| C8—O6 | 1.420 (3) | C15—H15C | 0.9600 |
| C8—H8 | 0.9800 | O6—Si1 | 1.6480 (18) |
| C9—O4 | 1.395 (3) | ||
| C2—C1—H1A | 109.5 | O4—C9—H9 | 107.7 |
| C2—C1—H1B | 109.5 | O5—C9—H9 | 107.7 |
| H1A—C1—H1B | 109.5 | O3—C9—H9 | 107.7 |
| C2—C1—H1C | 109.5 | Si1—C10—H10A | 109.5 |
| H1A—C1—H1C | 109.5 | Si1—C10—H10B | 109.5 |
| H1B—C1—H1C | 109.5 | H10A—C10—H10B | 109.5 |
| O1—C2—O2 | 111.3 (2) | Si1—C10—H10C | 109.5 |
| O1—C2—C1 | 107.8 (2) | H10A—C10—H10C | 109.5 |
| O2—C2—C1 | 107.4 (2) | H10B—C10—H10C | 109.5 |
| O1—C2—H2 | 110.1 | Si1—C11—H11A | 109.5 |
| O2—C2—H2 | 110.1 | Si1—C11—H11B | 109.5 |
| C1—C2—H2 | 110.1 | H11A—C11—H11B | 109.5 |
| O2—C3—C5 | 111.6 (2) | Si1—C11—H11C | 109.5 |
| O2—C3—C6 | 108.6 (2) | H11A—C11—H11C | 109.5 |
| C5—C3—C6 | 107.5 (2) | H11B—C11—H11C | 109.5 |
| O2—C3—H3 | 109.7 | C15—C12—C13 | 108.8 (3) |
| C5—C3—H3 | 109.7 | C15—C12—C14 | 109.3 (3) |
| C6—C3—H3 | 109.7 | C13—C12—C14 | 108.3 (3) |
| O1—C4—C5 | 111.2 (2) | C15—C12—Si1 | 111.8 (3) |
| O1—C4—C7 | 107.6 (2) | C13—C12—Si1 | 110.7 (2) |
| C5—C4—C7 | 107.4 (2) | C14—C12—Si1 | 107.9 (2) |
| O1—C4—H4 | 110.2 | C12—C13—H13A | 109.5 |
| C5—C4—H4 | 110.2 | C12—C13—H13B | 109.5 |
| C7—C4—H4 | 110.2 | H13A—C13—H13B | 109.5 |
| O3—C5—C3 | 109.3 (2) | C12—C13—H13C | 109.5 |
| O3—C5—C4 | 110.4 (2) | H13A—C13—H13C | 109.5 |
| C3—C5—C4 | 107.3 (2) | H13B—C13—H13C | 109.5 |
| O3—C5—H5 | 109.9 | C12—C14—H14A | 109.5 |
| C3—C5—H5 | 109.9 | C12—C14—H14B | 109.5 |
| C4—C5—H5 | 109.9 | H14A—C14—H14B | 109.5 |
| O5—C6—C8 | 109.0 (2) | C12—C14—H14C | 109.5 |
| O5—C6—C3 | 108.7 (2) | H14A—C14—H14C | 109.5 |
| C8—C6—C3 | 110.3 (2) | H14B—C14—H14C | 109.5 |
| O5—C6—H6 | 109.6 | C12—C15—H15A | 109.5 |
| C8—C6—H6 | 109.6 | C12—C15—H15B | 109.5 |
| C3—C6—H6 | 109.6 | H15A—C15—H15B | 109.5 |
| O4—C7—C8 | 109.6 (2) | C12—C15—H15C | 109.5 |
| O4—C7—C4 | 108.5 (2) | H15A—C15—H15C | 109.5 |
| C8—C7—C4 | 109.9 (2) | H15B—C15—H15C | 109.5 |
| O4—C7—H7 | 109.6 | C2—O1—C4 | 114.9 (2) |
| C8—C7—H7 | 109.6 | C2—O2—C3 | 114.5 (2) |
| C4—C7—H7 | 109.6 | C9—O3—C5 | 110.8 (2) |
| O6—C8—C7 | 110.9 (2) | C9—O4—C7 | 110.8 (2) |
| O6—C8—C6 | 110.0 (2) | C9—O5—C6 | 110.5 (2) |
| C7—C8—C6 | 106.3 (2) | C8—O6—Si1 | 124.48 (16) |
| O6—C8—H8 | 109.8 | O6—Si1—C11 | 104.99 (12) |
| C7—C8—H8 | 109.8 | O6—Si1—C10 | 110.57 (14) |
| C6—C8—H8 | 109.8 | C11—Si1—C10 | 110.20 (17) |
| O4—C9—O5 | 112.5 (2) | O6—Si1—C12 | 109.54 (12) |
| O4—C9—O3 | 110.7 (2) | C11—Si1—C12 | 111.17 (15) |
| O5—C9—O3 | 110.5 (2) | C10—Si1—C12 | 110.25 (17) |
| O2—C3—C5—O3 | 174.7 (2) | C1—C2—O2—C3 | −169.0 (2) |
| C6—C3—C5—O3 | 55.7 (3) | C5—C3—O2—C2 | −4.0 (3) |
| O2—C3—C5—C4 | 54.9 (3) | C6—C3—O2—C2 | 114.4 (2) |
| C6—C3—C5—C4 | −64.1 (3) | O4—C9—O3—C5 | −62.2 (3) |
| O1—C4—C5—O3 | −172.03 (19) | O5—C9—O3—C5 | 63.1 (3) |
| C7—C4—C5—O3 | −54.5 (3) | C3—C5—O3—C9 | −59.7 (3) |
| O1—C4—C5—C3 | −52.9 (3) | C4—C5—O3—C9 | 58.1 (3) |
| C7—C4—C5—C3 | 64.6 (3) | O5—C9—O4—C7 | −59.7 (3) |
| O2—C3—C6—O5 | −176.93 (19) | O3—C9—O4—C7 | 64.4 (3) |
| C5—C3—C6—O5 | −56.1 (3) | C8—C7—O4—C9 | 59.0 (3) |
| O2—C3—C6—C8 | −57.5 (3) | C4—C7—O4—C9 | −61.0 (3) |
| C5—C3—C6—C8 | 63.4 (3) | O4—C9—O5—C6 | 60.5 (3) |
| O1—C4—C7—O4 | 175.20 (18) | O3—C9—O5—C6 | −63.7 (3) |
| C5—C4—C7—O4 | 55.3 (3) | C8—C6—O5—C9 | −59.9 (3) |
| O1—C4—C7—C8 | 55.4 (3) | C3—C6—O5—C9 | 60.3 (3) |
| C5—C4—C7—C8 | −64.5 (3) | C7—C8—O6—Si1 | 135.56 (19) |
| O4—C7—C8—O6 | 61.8 (3) | C6—C8—O6—Si1 | −107.1 (2) |
| C4—C7—C8—O6 | −179.1 (2) | C8—O6—Si1—C11 | 154.8 (2) |
| O4—C7—C8—C6 | −57.9 (3) | C8—O6—Si1—C10 | 35.9 (2) |
| C4—C7—C8—C6 | 61.2 (3) | C8—O6—Si1—C12 | −85.8 (2) |
| O5—C6—C8—O6 | −61.8 (3) | C15—C12—Si1—O6 | 65.4 (3) |
| C3—C6—C8—O6 | 179.0 (2) | C13—C12—Si1—O6 | −173.1 (2) |
| O5—C6—C8—C7 | 58.4 (3) | C14—C12—Si1—O6 | −54.8 (2) |
| C3—C6—C8—C7 | −60.8 (3) | C15—C12—Si1—C11 | −179.0 (3) |
| O2—C2—O1—C4 | 53.3 (3) | C13—C12—Si1—C11 | −57.5 (3) |
| C1—C2—O1—C4 | 170.8 (2) | C14—C12—Si1—C11 | 60.8 (3) |
| C5—C4—O1—C2 | 0.2 (3) | C15—C12—Si1—C10 | −56.5 (3) |
| C7—C4—O1—C2 | −117.2 (2) | C13—C12—Si1—C10 | 65.0 (3) |
| O1—C2—O2—C3 | −51.2 (3) | C14—C12—Si1—C10 | −176.7 (2) |