| Literature DB >> 21587931 |
Abstract
In the title compound, C(11)H(15)N(3)OS, the dihedral angle between the aromatic ring and the thio-urea unit is 4.28 (7)° and an intra-molecular N-H⋯N hydrogen bond generates an S(5) ring. In the crystal, mol-ecules are linked into (001) sheets by N-H⋯S hydrogen bonds.Entities:
Year: 2010 PMID: 21587931 PMCID: PMC3007044 DOI: 10.1107/S1600536810022919
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H15N3OS | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 2302 reflections |
| θ = 2.8–25.3° | |
| µ = 0.24 mm−1 | |
| Block, colorless | |
| 0.22 × 0.20 × 0.18 mm |
| Bruker SMART CCD diffractometer | 2302 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 3.1° |
| phi and ω scans | |
| 22633 measured reflections | |
| 2912 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2912 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.12047 (4) | 1.04218 (4) | 0.57631 (3) | 0.0768 (2) | |
| N1 | 0.09565 (11) | 0.83299 (14) | 0.49802 (8) | 0.0648 (4) | |
| H1A | 0.0548 | 0.8818 | 0.4742 | 0.078* | |
| N2 | 0.11117 (10) | 0.70368 (14) | 0.47913 (8) | 0.0598 (3) | |
| C9 | 0.12596 (13) | 0.30355 (18) | 0.41061 (9) | 0.0637 (4) | |
| H9A | 0.1545 | 0.2367 | 0.4375 | 0.076* | |
| C3 | 0.14420 (12) | 0.88334 (15) | 0.55374 (9) | 0.0596 (4) | |
| N3 | 0.21067 (12) | 0.80566 (14) | 0.58550 (9) | 0.0719 (4) | |
| H3A | 0.2271 | 0.7331 | 0.5651 | 0.086* | |
| O1 | 0.09603 (11) | 0.15651 (14) | 0.31258 (7) | 0.0803 (4) | |
| C5 | 0.07418 (12) | 0.53144 (16) | 0.39807 (8) | 0.0576 (4) | |
| C10 | 0.11699 (13) | 0.42999 (18) | 0.43678 (9) | 0.0621 (4) | |
| H10A | 0.1403 | 0.4476 | 0.4815 | 0.075* | |
| C4 | 0.06596 (13) | 0.66625 (17) | 0.42425 (9) | 0.0626 (4) | |
| H4A | 0.0262 | 0.7267 | 0.3999 | 0.075* | |
| C8 | 0.09189 (12) | 0.27751 (17) | 0.34373 (9) | 0.0621 (4) | |
| C6 | 0.04087 (15) | 0.5032 (2) | 0.33114 (10) | 0.0719 (5) | |
| H6A | 0.0115 | 0.5696 | 0.3044 | 0.086* | |
| C11 | 0.14227 (19) | 0.05082 (19) | 0.34942 (13) | 0.0866 (6) | |
| H11A | 0.1397 | −0.0278 | 0.3216 | 0.130* | |
| H11B | 0.1061 | 0.0363 | 0.3922 | 0.130* | |
| H11C | 0.2123 | 0.0725 | 0.3594 | 0.130* | |
| C2 | 0.25846 (16) | 0.8338 (2) | 0.65277 (13) | 0.0910 (7) | |
| H2B | 0.2628 | 0.9285 | 0.6594 | 0.109* | |
| H2C | 0.3275 | 0.7984 | 0.6532 | 0.109* | |
| C7 | 0.05071 (16) | 0.3784 (2) | 0.30398 (10) | 0.0769 (5) | |
| H7A | 0.0296 | 0.3616 | 0.2586 | 0.092* | |
| C1 | 0.1984 (3) | 0.7743 (4) | 0.71090 (15) | 0.1455 (13) | |
| H1B | 0.2311 | 0.7943 | 0.7544 | 0.218* | |
| H1C | 0.1952 | 0.6803 | 0.7049 | 0.218* | |
| H1D | 0.1304 | 0.8100 | 0.7108 | 0.218* |
| S1 | 0.0653 (3) | 0.0441 (3) | 0.1211 (5) | 0.00297 (16) | −0.0100 (2) | −0.0109 (2) |
| N1 | 0.0687 (8) | 0.0469 (7) | 0.0786 (9) | 0.0078 (6) | −0.0085 (7) | 0.0005 (6) |
| N2 | 0.0596 (7) | 0.0479 (7) | 0.0720 (8) | 0.0022 (5) | −0.0015 (6) | −0.0004 (6) |
| C9 | 0.0672 (9) | 0.0567 (10) | 0.0673 (9) | 0.0013 (7) | −0.0052 (7) | 0.0071 (7) |
| C3 | 0.0526 (7) | 0.0447 (8) | 0.0814 (10) | −0.0024 (6) | 0.0014 (7) | −0.0002 (7) |
| N3 | 0.0716 (9) | 0.0512 (8) | 0.0929 (10) | 0.0102 (6) | −0.0169 (8) | −0.0137 (7) |
| O1 | 0.0857 (8) | 0.0647 (8) | 0.0905 (9) | 0.0036 (6) | −0.0126 (7) | −0.0171 (7) |
| C5 | 0.0515 (8) | 0.0583 (9) | 0.0632 (8) | 0.0022 (6) | −0.0032 (6) | −0.0007 (6) |
| C10 | 0.0695 (10) | 0.0594 (10) | 0.0575 (8) | −0.0005 (7) | −0.0070 (7) | 0.0017 (7) |
| C4 | 0.0604 (9) | 0.0585 (9) | 0.0688 (9) | 0.0067 (7) | −0.0063 (7) | 0.0016 (7) |
| C8 | 0.0547 (8) | 0.0613 (10) | 0.0702 (9) | −0.0008 (7) | −0.0022 (7) | −0.0071 (7) |
| C6 | 0.0762 (11) | 0.0698 (10) | 0.0697 (10) | 0.0143 (9) | −0.0188 (8) | 0.0012 (8) |
| C11 | 0.0946 (14) | 0.0568 (11) | 0.1083 (16) | 0.0024 (9) | 0.0065 (13) | −0.0021 (10) |
| C2 | 0.0766 (12) | 0.0677 (12) | 0.1285 (18) | 0.0107 (9) | −0.0402 (13) | −0.0265 (11) |
| C7 | 0.0856 (12) | 0.0772 (12) | 0.0679 (10) | 0.0109 (9) | −0.0231 (9) | −0.0102 (9) |
| C1 | 0.120 (2) | 0.232 (4) | 0.0849 (16) | −0.025 (2) | −0.0161 (16) | −0.032 (2) |
| S1—C3 | 1.6948 (17) | C10—H10A | 0.9300 |
| N1—C3 | 1.345 (2) | C4—H4A | 0.9300 |
| N1—N2 | 1.3742 (19) | C8—C7 | 1.385 (3) |
| N1—H1A | 0.8600 | C6—C7 | 1.373 (3) |
| N2—C4 | 1.267 (2) | C6—H6A | 0.9300 |
| C9—C10 | 1.381 (2) | C11—H11A | 0.9600 |
| C9—C8 | 1.386 (3) | C11—H11B | 0.9600 |
| C9—H9A | 0.9300 | C11—H11C | 0.9600 |
| C3—N3 | 1.321 (2) | C2—C1 | 1.492 (4) |
| N3—C2 | 1.464 (2) | C2—H2B | 0.9700 |
| N3—H3A | 0.8600 | C2—H2C | 0.9700 |
| O1—C8 | 1.365 (2) | C7—H7A | 0.9300 |
| O1—C11 | 1.419 (3) | C1—H1B | 0.9600 |
| C5—C10 | 1.387 (2) | C1—H1C | 0.9600 |
| C5—C6 | 1.388 (2) | C1—H1D | 0.9600 |
| C5—C4 | 1.459 (2) | ||
| C3—N1—N2 | 120.14 (13) | C7—C8—C9 | 119.75 (16) |
| C3—N1—H1A | 119.9 | C7—C6—C5 | 120.86 (16) |
| N2—N1—H1A | 119.9 | C7—C6—H6A | 119.6 |
| C4—N2—N1 | 115.87 (14) | C5—C6—H6A | 119.6 |
| C10—C9—C8 | 119.16 (16) | O1—C11—H11A | 109.5 |
| C10—C9—H9A | 120.4 | O1—C11—H11B | 109.5 |
| C8—C9—H9A | 120.4 | H11A—C11—H11B | 109.5 |
| N3—C3—N1 | 116.89 (14) | O1—C11—H11C | 109.5 |
| N3—C3—S1 | 124.54 (13) | H11A—C11—H11C | 109.5 |
| N1—C3—S1 | 118.51 (12) | H11B—C11—H11C | 109.5 |
| C3—N3—C2 | 124.95 (15) | N3—C2—C1 | 111.03 (19) |
| C3—N3—H3A | 117.5 | N3—C2—H2B | 109.4 |
| C2—N3—H3A | 117.5 | C1—C2—H2B | 109.4 |
| C8—O1—C11 | 118.37 (16) | N3—C2—H2C | 109.4 |
| C10—C5—C6 | 118.11 (16) | C1—C2—H2C | 109.4 |
| C10—C5—C4 | 122.54 (15) | H2B—C2—H2C | 108.0 |
| C6—C5—C4 | 119.32 (15) | C6—C7—C8 | 120.37 (16) |
| C9—C10—C5 | 121.73 (16) | C6—C7—H7A | 119.8 |
| C9—C10—H10A | 119.1 | C8—C7—H7A | 119.8 |
| C5—C10—H10A | 119.1 | C2—C1—H1B | 109.5 |
| N2—C4—C5 | 122.20 (15) | C2—C1—H1C | 109.5 |
| N2—C4—H4A | 118.9 | H1B—C1—H1C | 109.5 |
| C5—C4—H4A | 118.9 | C2—C1—H1D | 109.5 |
| O1—C8—C7 | 115.83 (15) | H1B—C1—H1D | 109.5 |
| O1—C8—C9 | 124.41 (16) | H1C—C1—H1D | 109.5 |
| H··· | ||||
| N1—H1A···S1i | 0.86 | 2.60 | 3.4080 (17) | 156 |
| N3—H3A···N2 | 0.86 | 2.26 | 2.634 (2) | 106 |
| N3—H3A···S1ii | 0.86 | 2.78 | 3.4670 (17) | 137 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.60 | 3.4080 (17) | 156 |
| N3—H3 | 0.86 | 2.26 | 2.634 (2) | 106 |
| N3—H3 | 0.86 | 2.78 | 3.4670 (17) | 137 |
Symmetry codes: (i) ; (ii) .