Literature DB >> 21587899

(1-Phenyl-1H-1,2,3-triazol-4-yl)methyl pyridine-3-carboxyl-ate.

Zakirjon Karimov, Ibrakhim Abdugafurov, Samat Talipov, Bakhodir Tashkhodjaev.   

Abstract

In the title compound, C(15)H(12)N(4)O(2), the dihedral angle between the planes of the nicotino-yloxy fragment and triazole ring is 88.61 (5)°. The dihedral angle between the planes of triazole and benzene rings is 16.54 (11)°. The crystal structure is stabilized by inter-molecular C-H⋯N, C-H⋯O and C-H⋯π(triazole) hydrogen bonds and aromatic π-π stacking inter-actions between the benzene and triazole rings [centroid-centroid distance = 3.895 (1) Å].

Entities:  

Year:  2010        PMID: 21587899      PMCID: PMC3007003          DOI: 10.1107/S1600536810021999

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of 1,2,3-triazole derivatives, see: Berestovitskaya et al. (2007 ▶); Piterskaya et al. (1996a ▶,b ▶). For their physiological activity, see: Contreras et al. (1978 ▶). For related structures, see: Berestovitskaya et al. (2007 ▶); Monkowius et al. (2007 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C15H12N4O2 M = 280.29 Monoclinic, a = 5.5178 (5) Å b = 23.650 (2) Å c = 10.287 (2) Å β = 91.841 (14)° V = 1341.8 (3) Å3 Z = 4 Cu Kα radiation μ = 0.79 mm−1 T = 293 K 0.70 × 0.45 × 0.10 mm

Data collection

Oxford Diffraction Xcalibur Ruby diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009 ▶) T min = 0.674, T max = 1.000 4791 measured reflections 2460 independent reflections 1877 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.124 S = 1.04 2460 reflections 191 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.13 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810021999/kp2262sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810021999/kp2262Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H12N4O2F(000) = 584
Mr = 280.29Dx = 1.388 Mg m3
Monoclinic, P21/nMelting point: 370(2) K
Hall symbol: -P 2ynCu Kα radiation, λ = 1.5418 Å
a = 5.5178 (5) ÅCell parameters from 2409 reflections
b = 23.650 (2) Åθ = 3.6–70.6°
c = 10.287 (2) ŵ = 0.79 mm1
β = 91.841 (14)°T = 293 K
V = 1341.8 (3) Å3Prism, colourless
Z = 40.70 × 0.45 × 0.10 mm
Oxford Diffraction Xcalibur Ruby diffractometer2460 independent reflections
Radiation source: Enhance (Cu) X-ray Source1877 reflections with I > 2σ(I)
graphiteRint = 0.026
Detector resolution: 10.2576 pixels mm-1θmax = 70.8°, θmin = 3.7°
ω scansh = −6→5
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2009)k = −22→28
Tmin = 0.674, Tmax = 1.000l = −12→7
4791 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.124w = 1/[σ2(Fo2) + (0.0774P)2 + 0.039P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.009
2460 reflectionsΔρmax = 0.18 e Å3
191 parametersΔρmin = −0.13 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0116 (12)
Experimental. CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.33.40 (release 27-04-2009 CrysAlis171 .NET) (compiled Apr 27 2009,10:20:11) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O11.0509 (3)0.12524 (6)0.39435 (11)0.0714 (4)
O20.8540 (2)0.11948 (5)0.58047 (11)0.0523 (3)
N11.4934 (3)0.25199 (7)0.54437 (16)0.0742 (5)
N20.3515 (3)0.05484 (6)0.64902 (15)0.0623 (4)
N30.2755 (2)0.02085 (7)0.73956 (15)0.0594 (4)
N40.4631 (2)−0.01361 (5)0.77328 (12)0.0462 (3)
C11.3474 (4)0.21113 (8)0.49855 (17)0.0633 (5)
H11.36990.19840.41430.076*
C21.4557 (4)0.26924 (9)0.66483 (19)0.0704 (5)
H21.55310.29810.69870.084*
C31.2820 (4)0.24710 (8)0.74223 (17)0.0666 (5)
H31.26480.26030.82650.080*
C41.1335 (3)0.20495 (8)0.69328 (16)0.0582 (5)
H41.01410.18920.74370.070*
C51.1658 (3)0.18666 (7)0.56780 (15)0.0485 (4)
C61.0211 (3)0.14094 (7)0.50420 (15)0.0503 (4)
C70.7195 (3)0.07246 (8)0.52359 (16)0.0600 (5)
H7A0.83040.04640.48360.072*
H7B0.60660.08630.45670.072*
C80.5854 (3)0.04295 (7)0.62530 (15)0.0505 (4)
C90.6565 (3)−0.00074 (7)0.70339 (15)0.0498 (4)
H90.8078−0.01810.70750.060*
C100.4351 (3)−0.05578 (7)0.87124 (15)0.0462 (4)
C110.2462 (3)−0.05189 (8)0.95377 (18)0.0613 (5)
H110.1349−0.02250.94420.074*
C120.2202 (3)−0.09122 (9)1.05070 (19)0.0679 (5)
H120.0903−0.08881.10590.082*
C130.3853 (4)−0.13394 (9)1.0659 (2)0.0698 (5)
H130.3697−0.16031.13230.084*
C140.5740 (4)−0.13789 (10)0.9831 (2)0.0789 (6)
H140.6860−0.16710.99340.095*
C150.5996 (3)−0.09893 (9)0.88416 (19)0.0671 (5)
H150.7266−0.10200.82730.081*
U11U22U33U12U13U23
O10.0949 (10)0.0714 (9)0.0485 (7)−0.0203 (7)0.0127 (6)−0.0026 (6)
O20.0533 (6)0.0509 (7)0.0531 (6)−0.0076 (5)0.0077 (5)−0.0050 (5)
N10.0808 (11)0.0768 (11)0.0660 (10)−0.0296 (9)0.0194 (8)−0.0046 (8)
N20.0544 (8)0.0561 (9)0.0766 (10)0.0028 (7)0.0042 (7)0.0052 (8)
N30.0433 (7)0.0591 (9)0.0761 (10)0.0071 (7)0.0071 (7)0.0038 (8)
N40.0375 (6)0.0472 (7)0.0540 (7)0.0014 (6)0.0038 (5)−0.0059 (6)
C10.0727 (11)0.0645 (11)0.0532 (10)−0.0148 (10)0.0140 (9)−0.0010 (8)
C20.0777 (13)0.0669 (12)0.0670 (11)−0.0241 (10)0.0087 (10)−0.0064 (10)
C30.0748 (12)0.0681 (12)0.0577 (11)−0.0128 (10)0.0123 (9)−0.0138 (9)
C40.0587 (10)0.0604 (11)0.0565 (10)−0.0068 (8)0.0168 (8)−0.0006 (8)
C50.0505 (8)0.0460 (9)0.0493 (8)0.0009 (7)0.0054 (7)0.0033 (7)
C60.0565 (9)0.0480 (9)0.0465 (9)0.0006 (8)0.0057 (7)0.0053 (7)
C70.0680 (11)0.0559 (10)0.0562 (10)−0.0140 (9)0.0022 (8)−0.0067 (8)
C80.0489 (8)0.0488 (9)0.0538 (9)−0.0055 (7)0.0013 (7)−0.0095 (7)
C90.0386 (7)0.0567 (10)0.0543 (9)0.0003 (7)0.0054 (7)−0.0045 (8)
C100.0418 (7)0.0460 (8)0.0511 (8)−0.0025 (7)0.0053 (6)−0.0076 (7)
C110.0521 (9)0.0629 (11)0.0699 (11)0.0067 (8)0.0157 (8)−0.0027 (9)
C120.0606 (10)0.0772 (13)0.0673 (12)−0.0039 (10)0.0221 (9)−0.0022 (10)
C130.0723 (12)0.0686 (13)0.0693 (12)−0.0005 (10)0.0130 (10)0.0088 (10)
C140.0784 (13)0.0700 (13)0.0899 (15)0.0212 (11)0.0255 (11)0.0180 (11)
C150.0612 (10)0.0679 (12)0.0738 (12)0.0135 (10)0.0261 (9)0.0072 (10)
O1—C61.2059 (19)C5—C61.484 (2)
O2—C61.3301 (19)C7—C81.476 (2)
O2—C71.450 (2)C7—H7A0.9700
N1—C21.327 (2)C7—H7B0.9700
N1—C11.334 (2)C8—C91.359 (2)
N2—N31.309 (2)C9—H90.9300
N2—C81.351 (2)C10—C111.369 (2)
N3—N41.3536 (18)C10—C151.369 (2)
N4—C91.3409 (19)C11—C121.375 (3)
N4—C101.430 (2)C11—H110.9300
C1—C51.376 (2)C12—C131.366 (3)
C1—H10.9300C12—H120.9300
C2—C31.369 (3)C13—C141.369 (3)
C2—H20.9300C13—H130.9300
C3—C41.375 (2)C14—C151.383 (3)
C3—H30.9300C14—H140.9300
C4—C51.378 (2)C15—H150.9300
C4—H40.9300
C6—O2—C7114.22 (13)O2—C7—H7B109.7
C2—N1—C1116.19 (16)C8—C7—H7B109.7
N3—N2—C8109.28 (14)H7A—C7—H7B108.2
N2—N3—N4107.01 (13)N2—C8—C9108.11 (15)
C9—N4—N3109.94 (14)N2—C8—C7122.22 (16)
C9—N4—C10129.94 (13)C9—C8—C7129.55 (16)
N3—N4—C10120.13 (13)N4—C9—C8105.66 (14)
N1—C1—C5124.29 (17)N4—C9—H9127.2
N1—C1—H1117.9C8—C9—H9127.2
C5—C1—H1117.9C11—C10—C15120.38 (17)
N1—C2—C3123.98 (18)C11—C10—N4119.46 (15)
N1—C2—H2118.0C15—C10—N4120.15 (15)
C3—C2—H2118.0C10—C11—C12120.25 (17)
C2—C3—C4118.94 (17)C10—C11—H11119.9
C2—C3—H3120.5C12—C11—H11119.9
C4—C3—H3120.5C13—C12—C11119.91 (18)
C3—C4—C5118.49 (16)C13—C12—H12120.0
C3—C4—H4120.8C11—C12—H12120.0
C5—C4—H4120.8C12—C13—C14119.8 (2)
C1—C5—C4118.09 (16)C12—C13—H13120.1
C1—C5—C6117.97 (15)C14—C13—H13120.1
C4—C5—C6123.91 (15)C13—C14—C15120.7 (2)
O1—C6—O2123.60 (16)C13—C14—H14119.7
O1—C6—C5123.36 (16)C15—C14—H14119.7
O2—C6—C5113.04 (14)C10—C15—C14119.00 (17)
O2—C7—C8109.78 (13)C10—C15—H15120.5
O2—C7—H7A109.7C14—C15—H15120.5
C8—C7—H7A109.7
C8—N2—N3—N4−0.57 (18)N3—N2—C8—C7177.18 (14)
N2—N3—N4—C90.18 (18)O2—C7—C8—N294.82 (18)
N2—N3—N4—C10179.94 (13)O2—C7—C8—C9−89.6 (2)
C2—N1—C1—C5−0.2 (3)N3—N4—C9—C80.28 (18)
C1—N1—C2—C31.1 (3)C10—N4—C9—C8−179.45 (15)
N1—C2—C3—C4−1.0 (3)N2—C8—C9—N4−0.62 (17)
C2—C3—C4—C50.0 (3)C7—C8—C9—N4−176.70 (15)
N1—C1—C5—C4−0.8 (3)C9—N4—C10—C11162.57 (16)
N1—C1—C5—C6−178.98 (18)N3—N4—C10—C11−17.1 (2)
C3—C4—C5—C10.8 (3)C9—N4—C10—C15−15.9 (3)
C3—C4—C5—C6178.92 (16)N3—N4—C10—C15164.39 (16)
C7—O2—C6—O14.0 (2)C15—C10—C11—C120.2 (3)
C7—O2—C6—C5−176.54 (14)N4—C10—C11—C12−178.28 (16)
C1—C5—C6—O1−1.8 (3)C10—C11—C12—C130.9 (3)
C4—C5—C6—O1−179.94 (17)C11—C12—C13—C14−1.0 (3)
C1—C5—C6—O2178.69 (15)C12—C13—C14—C150.2 (3)
C4—C5—C6—O20.6 (2)C11—C10—C15—C14−1.1 (3)
C6—O2—C7—C8165.90 (14)N4—C10—C15—C14177.40 (17)
N3—N2—C8—C90.76 (18)C13—C14—C15—C100.9 (3)
Cg1 is the centroid of the triazole ring.
D—H···AD—HH···AD···AD—H···A
C14—H14···N1i0.932.643.550 (3)165
C2—H2···O1ii0.932.713.464 (2)139
C15—H15···O1iii0.932.683.559 (2)158
C7—H7a···Cg1iv0.972.9173.313 (2)106
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the triazole ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C14—H14⋯N1i0.932.643.550 (3)165
C2—H2⋯O1ii0.932.713.464 (2)139
C15—H15⋯O1iii0.932.683.559 (2)158
C7—H7a⋯Cg1iv0.972.923.313 (2)106

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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