| Literature DB >> 21587796 |
Abstract
In the title compound, C(12)H(12)N(2)·2C(7)H(7)NO(2), the 4-amino-benzoic acid mol-ecules are linked by O-H⋯N hydrogen bonds to 1,2-bis-(4-pyrid-yl)ethane, forming linear hydrogen bonded chains parallel to [21]. The structure exhibits a hydrogen-bonding network involving COOH⋯N(pyrid-yl) and amine and carb-oxy-lic N-H⋯ O inter-actions. In addition, π-π stacking inter-actions [centroid-centroid distance = 3.8622 (14) Å] are also present.Entities:
Year: 2010 PMID: 21587796 PMCID: PMC3006685 DOI: 10.1107/S1600536810020337
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C12H12N2·2C7H7NO2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2347 reflections |
| θ = 3.0–23.7° | |
| µ = 0.09 mm−1 | |
| β = 115.579 (2)° | Parallelepiped, colorless |
| 0.76 × 0.34 × 0.22 mm | |
| Bruker SMART CCD area-detector diffractometer | 2406 independent reflections |
| Radiation source: fine-focus sealed tube | 1530 reflections with |
| graphite | |
| phi and ω scans | θmax = 26.1°, θmin = 1.8° |
| Absorption correction: multi-scan ( | |
| 6871 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2406 reflections | (Δ/σ)max < 0.001 |
| 162 parameters | Δρmax = 0.21 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| 0 constraints |
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement on |
| N2 | 1.1453 (2) | 0.43421 (8) | 0.3904 (2) | 0.0738 (7) | |
| C8 | 1.0950 (3) | 0.48682 (10) | 0.3233 (3) | 0.0783 (8) | |
| C9 | 0.8987 (3) | 0.50396 (11) | 0.2231 (4) | 0.0864 (9) | |
| C10 | 0.7437 (3) | 0.46541 (11) | 0.1882 (3) | 0.0739 (8) | |
| C11 | 0.7978 (3) | 0.41122 (10) | 0.2571 (3) | 0.0806 (8) | |
| C12 | 0.9970 (3) | 0.39735 (10) | 0.3566 (3) | 0.0826 (9) | |
| C13 | 0.5251 (3) | 0.48182 (15) | 0.0801 (4) | 0.1066 (13) | |
| O1 | 0.4674 (2) | 0.33090 (7) | 0.4157 (2) | 0.0841 (5) | |
| O2 | 0.51671 (19) | 0.40480 (7) | 0.6066 (2) | 0.0837 (6) | |
| N1 | 1.3716 (3) | 0.28863 (10) | 1.0252 (3) | 0.0824 (8) | |
| C1 | 0.5750 (3) | 0.35702 (8) | 0.5572 (3) | 0.0624 (6) | |
| C2 | 0.7798 (3) | 0.33843 (8) | 0.6832 (2) | 0.0560 (6) | |
| C3 | 0.8914 (3) | 0.36554 (8) | 0.8520 (3) | 0.0621 (6) | |
| C4 | 1.0858 (3) | 0.34892 (8) | 0.9655 (3) | 0.0649 (6) | |
| C5 | 1.1749 (3) | 0.30406 (8) | 0.9143 (3) | 0.0601 (6) | |
| C6 | 1.0617 (3) | 0.27578 (9) | 0.7479 (3) | 0.0722 (7) | |
| C7 | 0.8687 (3) | 0.29233 (9) | 0.6355 (3) | 0.0690 (7) | |
| H8A | 1.19710 | 0.51350 | 0.34500 | 0.0940* | |
| H9A | 0.87020 | 0.54150 | 0.17880 | 0.1040* | |
| H11A | 0.69910 | 0.38350 | 0.23650 | 0.0970* | |
| H12A | 1.02950 | 0.36010 | 0.40280 | 0.0990* | |
| H13A | 0.44700 | 0.44670 | 0.03900 | 0.1280* | |
| H13B | 0.48190 | 0.50100 | 0.16510 | 0.1280* | |
| H1A | 1.413 (4) | 0.3021 (12) | 1.142 (4) | 0.108 (9)* | |
| H1B | 1.409 (3) | 0.2543 (12) | 0.988 (3) | 0.095 (8)* | |
| H2A | 0.38730 | 0.41220 | 0.52780 | 0.1600* | |
| H3A | 0.83380 | 0.39560 | 0.88940 | 0.0750* | |
| H4A | 1.15800 | 0.36800 | 1.07780 | 0.0780* | |
| H6A | 1.11810 | 0.24500 | 0.71210 | 0.0870* | |
| H7A | 0.79550 | 0.27240 | 0.52510 | 0.0830* |
| N2 | 0.0497 (10) | 0.0777 (12) | 0.0824 (12) | 0.0081 (8) | 0.0176 (9) | 0.0039 (9) |
| C8 | 0.0490 (11) | 0.0770 (14) | 0.0935 (16) | −0.0026 (10) | 0.0163 (11) | 0.0066 (12) |
| C9 | 0.0549 (13) | 0.0798 (15) | 0.1084 (18) | 0.0100 (10) | 0.0201 (12) | 0.0279 (13) |
| C10 | 0.0445 (10) | 0.0941 (16) | 0.0755 (13) | 0.0038 (10) | 0.0189 (9) | 0.0124 (11) |
| C11 | 0.0565 (13) | 0.0847 (15) | 0.0937 (15) | −0.0058 (10) | 0.0260 (12) | 0.0087 (12) |
| C12 | 0.0670 (14) | 0.0707 (13) | 0.1014 (17) | 0.0099 (11) | 0.0281 (13) | 0.0117 (12) |
| C13 | 0.0498 (13) | 0.146 (3) | 0.110 (2) | 0.0138 (13) | 0.0212 (13) | 0.0438 (17) |
| O1 | 0.0607 (8) | 0.0805 (10) | 0.0741 (9) | −0.0025 (7) | −0.0058 (7) | −0.0085 (8) |
| O2 | 0.0553 (8) | 0.0796 (10) | 0.0888 (11) | 0.0151 (7) | 0.0052 (7) | −0.0106 (8) |
| N1 | 0.0556 (11) | 0.0881 (14) | 0.0825 (14) | 0.0129 (10) | 0.0100 (10) | 0.0009 (11) |
| C1 | 0.0496 (10) | 0.0616 (11) | 0.0620 (11) | −0.0040 (8) | 0.0110 (9) | 0.0041 (9) |
| C2 | 0.0480 (10) | 0.0548 (10) | 0.0557 (10) | −0.0022 (8) | 0.0134 (8) | 0.0004 (8) |
| C3 | 0.0574 (11) | 0.0591 (11) | 0.0592 (11) | 0.0088 (8) | 0.0152 (9) | −0.0038 (9) |
| C4 | 0.0570 (11) | 0.0638 (11) | 0.0546 (10) | 0.0021 (9) | 0.0060 (9) | −0.0047 (9) |
| C5 | 0.0483 (10) | 0.0596 (11) | 0.0627 (11) | 0.0042 (8) | 0.0147 (9) | 0.0075 (9) |
| C6 | 0.0662 (12) | 0.0703 (12) | 0.0705 (12) | 0.0141 (10) | 0.0206 (10) | −0.0085 (10) |
| C7 | 0.0628 (12) | 0.0690 (12) | 0.0593 (11) | 0.0029 (9) | 0.0114 (9) | −0.0099 (9) |
| O1—C1 | 1.220 (3) | C11—H11A | 0.9300 |
| O2—C1 | 1.310 (3) | C12—H12A | 0.9300 |
| O2—H2A | 0.9000 | C13—H13B | 0.9700 |
| N2—C12 | 1.320 (3) | C13—H13A | 0.9700 |
| N2—C8 | 1.321 (3) | C1—C2 | 1.468 (3) |
| N1—C5 | 1.377 (3) | C2—C7 | 1.390 (3) |
| N1—H1A | 0.90 (3) | C2—C3 | 1.384 (3) |
| N1—H1B | 0.93 (3) | C3—C4 | 1.376 (3) |
| C8—C9 | 1.373 (4) | C4—C5 | 1.382 (3) |
| C9—C10 | 1.381 (4) | C5—C6 | 1.386 (3) |
| C10—C13 | 1.509 (4) | C6—C7 | 1.366 (3) |
| C10—C11 | 1.362 (3) | C3—H3A | 0.9300 |
| C11—C12 | 1.369 (3) | C4—H4A | 0.9300 |
| C13—C13i | 1.436 (4) | C6—H6A | 0.9300 |
| C8—H8A | 0.9300 | C7—H7A | 0.9300 |
| C9—H9A | 0.9300 | ||
| O1···N1ii | 3.081 (3) | C12···H4Axi | 3.0000 |
| O1···N1iii | 3.030 (3) | C13···H9Ai | 2.7900 |
| O2···N2iv | 2.613 (2) | H1A···O1vii | 2.14 (3) |
| O1···H1Aiii | 2.14 (3) | H1A···H4A | 2.3000 |
| O1···H1Bii | 2.16 (3) | H1B···H6A | 2.3200 |
| O1···H7A | 2.5700 | H1B···O1viii | 2.16 (3) |
| O1···H11A | 2.9200 | H1B···C1viii | 2.81 (3) |
| O1···H4Aiii | 2.8000 | H2A···C8iv | 2.6900 |
| O2···H3A | 2.4500 | H2A···C12iv | 2.6200 |
| O2···H8Av | 2.7400 | H2A···N2iv | 1.7200 |
| O2···H13Bvi | 2.8400 | H3A···O2 | 2.4500 |
| N1···O1vii | 3.030 (3) | H3A···C11xii | 3.0600 |
| N1···O1viii | 3.081 (3) | H4A···H1A | 2.3000 |
| N2···O2ix | 2.613 (2) | H4A···C12xii | 3.0000 |
| N2···C1ix | 3.368 (3) | H4A···O1vii | 2.8000 |
| N1···H6Ax | 2.9500 | H6A···H1B | 2.3200 |
| N2···H2Aix | 1.7200 | H6A···N1xiii | 2.9500 |
| C1···N2iv | 3.368 (3) | H6A···C4xiii | 2.8700 |
| C3···C9v | 3.567 (3) | H6A···C5xiii | 2.8100 |
| C8···C9v | 3.587 (4) | H7A···O1 | 2.5700 |
| C9···C8v | 3.587 (4) | H8A···O2v | 2.7400 |
| C9···C3v | 3.567 (3) | H9A···C4v | 2.8700 |
| C1···H1Bii | 2.81 (3) | H9A···C13i | 2.7900 |
| C3···H9Av | 2.8600 | H9A···C3v | 2.8600 |
| C4···H9Av | 2.8700 | H9A···H13Ai | 2.2400 |
| C4···H6Ax | 2.8700 | H11A···O1 | 2.9200 |
| C5···H6Ax | 2.8100 | H11A···H13A | 2.3500 |
| C7···H12A | 3.0300 | H12A···C7 | 3.0300 |
| C8···H2Aix | 2.6900 | H13A···H11A | 2.3500 |
| C9···H13Ai | 2.7500 | H13A···C9i | 2.7500 |
| C11···H3Axi | 3.0600 | H13A···H9Ai | 2.2400 |
| C12···H2Aix | 2.6200 | H13B···O2vi | 2.8400 |
| C1—O2—H2A | 110.00 | C13i—C13—H13A | 108.00 |
| C8—N2—C12 | 117.08 (19) | C13i—C13—H13B | 108.00 |
| C5—N1—H1A | 111 (2) | O2—C1—C2 | 114.69 (17) |
| C5—N1—H1B | 113.1 (14) | O1—C1—O2 | 122.1 (2) |
| H1A—N1—H1B | 128 (2) | O1—C1—C2 | 123.22 (19) |
| N2—C8—C9 | 122.9 (2) | C1—C2—C7 | 120.41 (16) |
| C8—C9—C10 | 119.9 (2) | C3—C2—C7 | 117.52 (19) |
| C9—C10—C11 | 116.5 (2) | C1—C2—C3 | 122.07 (19) |
| C11—C10—C13 | 121.1 (2) | C2—C3—C4 | 121.4 (2) |
| C9—C10—C13 | 122.4 (2) | C3—C4—C5 | 120.6 (2) |
| C10—C11—C12 | 120.2 (2) | N1—C5—C4 | 120.6 (2) |
| N2—C12—C11 | 123.3 (2) | C4—C5—C6 | 118.1 (2) |
| C10—C13—C13i | 117.1 (2) | N1—C5—C6 | 121.3 (2) |
| C9—C8—H8A | 118.00 | C5—C6—C7 | 121.1 (2) |
| N2—C8—H8A | 119.00 | C2—C7—C6 | 121.17 (19) |
| C8—C9—H9A | 120.00 | C2—C3—H3A | 119.00 |
| C10—C9—H9A | 120.00 | C4—C3—H3A | 119.00 |
| C10—C11—H11A | 120.00 | C3—C4—H4A | 120.00 |
| C12—C11—H11A | 120.00 | C5—C4—H4A | 120.00 |
| N2—C12—H12A | 118.00 | C5—C6—H6A | 119.00 |
| C11—C12—H12A | 118.00 | C7—C6—H6A | 119.00 |
| C10—C13—H13B | 108.00 | C2—C7—H7A | 119.00 |
| H13A—C13—H13B | 107.00 | C6—C7—H7A | 119.00 |
| C10—C13—H13A | 108.00 | ||
| C12—N2—C8—C9 | 0.3 (3) | O2—C1—C2—C3 | 7.6 (3) |
| C8—N2—C12—C11 | 0.0 (3) | O2—C1—C2—C7 | −172.38 (19) |
| N2—C8—C9—C10 | −0.2 (4) | C1—C2—C3—C4 | −177.7 (2) |
| C8—C9—C10—C11 | −0.3 (4) | C7—C2—C3—C4 | 2.3 (3) |
| C8—C9—C10—C13 | 179.6 (2) | C1—C2—C7—C6 | 177.6 (2) |
| C9—C10—C11—C12 | 0.6 (3) | C3—C2—C7—C6 | −2.3 (3) |
| C13—C10—C11—C12 | −179.3 (2) | C2—C3—C4—C5 | −0.5 (3) |
| C9—C10—C13—C13i | 40.3 (4) | C3—C4—C5—N1 | 178.0 (2) |
| C11—C10—C13—C13i | −139.9 (3) | C3—C4—C5—C6 | −1.2 (3) |
| C10—C11—C12—N2 | −0.4 (3) | N1—C5—C6—C7 | −178.0 (2) |
| C10—C13—C13i—C10i | −180.0 (2) | C4—C5—C6—C7 | 1.2 (3) |
| O1—C1—C2—C3 | −173.5 (2) | C5—C6—C7—C2 | 0.6 (3) |
| O1—C1—C2—C7 | 6.5 (3) |
| H··· | ||||
| N1—H1A···O1vii | 0.90 (3) | 2.14 (3) | 3.030 (3) | 171 (3) |
| N1—H1B···O1viii | 0.93 (3) | 2.16 (3) | 3.081 (3) | 172 (2) |
| O2—H2A···N2iv | 0.90 | 1.72 | 2.613 (2) | 173 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.90 (3) | 2.14 (3) | 3.030 (3) | 171 (3) |
| N1—H1 | 0.93 (3) | 2.16 (3) | 3.081 (3) | 172 (2) |
| O2—H2 | 0.90 | 1.72 | 2.613 (2) | 173 |
Symmetry codes: (i) ; (ii) ; (iii) .