| Literature DB >> 21587758 |
Jiong-Peng Zhao1, Fu-Chen Liu.
Abstract
In the title compound, [Co(C(5)H(3)N(4)O)(N(3))(H(2)O)](n), the cobalt ion is coordinated by three N atoms of two organic ligands, two N atoms of two azide anions and one water mol-ecule in a distorted octa-hedral geometry. The metal atoms are connected via the ligands into layers, which are further connected by O-H⋯N and O-H⋯O hydrogen bonding.Entities:
Year: 2010 PMID: 21587758 PMCID: PMC3006688 DOI: 10.1107/S1600536810023809
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C5H3N4O)(N3)(H2O)] | |
| Monoclinic, | Mo |
| Cell parameters from 7903 reflections | |
| θ = 3.1–27.7° | |
| µ = 2.04 mm−1 | |
| β = 113.08 (2)° | |
| Block, red | |
| 0.2 × 0.18 × 0.18 mm |
| Rigaku SCXmini diffractometer | 1469 independent reflections |
| Radiation source: fine-focus sealed tube | 1352 reflections with |
| graphite | |
| ω scans | θmax = 25.0°, θmin = 3.1° |
| Absorption correction: multi-scan ( | |
| 6902 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1469 reflections | (Δ/σ)max < 0.001 |
| 144 parameters | Δρmax = 1.50 e Å−3 |
| 0 restraints | Δρmin = −0.43 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.30993 (8) | −0.38921 (6) | −0.53843 (5) | 0.0158 (2) | |
| O1 | 0.2961 (5) | −0.4313 (3) | −0.3763 (3) | 0.0234 (7) | |
| N1 | 0.3036 (6) | −0.1727 (4) | −0.1987 (3) | 0.0212 (8) | |
| N2 | 0.3051 (6) | −0.3027 (4) | −0.2197 (3) | 0.0204 (8) | |
| N3 | 0.2971 (5) | −0.3160 (4) | −0.3251 (3) | 0.0179 (8) | |
| N4 | 0.2849 (6) | −0.1814 (4) | −0.4803 (3) | 0.0211 (8) | |
| N5 | 0.3650 (6) | −0.5988 (4) | −0.5436 (3) | 0.0213 (8) | |
| N6 | 0.2624 (6) | −0.6837 (4) | −0.6055 (3) | 0.0230 (9) | |
| N7 | 0.1639 (8) | −0.7656 (5) | −0.6637 (4) | 0.0420 (12) | |
| C1 | 0.2719 (7) | −0.0579 (5) | −0.5091 (4) | 0.0261 (11) | |
| H1A | 0.2669 | −0.0371 | −0.5816 | 0.031* | |
| C2 | 0.2650 (9) | 0.0474 (5) | −0.4373 (4) | 0.0317 (11) | |
| H2A | 0.2529 | 0.1337 | −0.4644 | 0.038* | |
| C3 | 0.2756 (8) | 0.0249 (5) | −0.3296 (4) | 0.0261 (10) | |
| H3A | 0.2724 | 0.0936 | −0.2817 | 0.031* | |
| C4 | 0.2914 (7) | −0.1065 (5) | −0.2948 (4) | 0.0225 (10) | |
| C5 | 0.2908 (6) | −0.1985 (4) | −0.3742 (3) | 0.0172 (9) | |
| O1W | −0.0066 (6) | −0.3972 (5) | −0.6162 (4) | 0.0402 (10) | |
| H1WB | −0.045 (10) | −0.364 (7) | −0.673 (6) | 0.05 (2)* | |
| H1WA | −0.078 (12) | −0.466 (8) | −0.626 (7) | 0.07 (3)* |
| Co1 | 0.0175 (3) | 0.0180 (3) | 0.0126 (3) | −0.0012 (2) | 0.0067 (2) | 0.0002 (2) |
| O1 | 0.0313 (18) | 0.0192 (16) | 0.0224 (16) | −0.0006 (14) | 0.0135 (14) | −0.0048 (13) |
| N1 | 0.0208 (19) | 0.027 (2) | 0.0158 (18) | 0.0013 (16) | 0.0071 (15) | 0.0004 (16) |
| N2 | 0.029 (2) | 0.0180 (19) | 0.0177 (18) | 0.0012 (16) | 0.0130 (16) | 0.0002 (15) |
| N3 | 0.0213 (19) | 0.0178 (19) | 0.0165 (18) | −0.0005 (15) | 0.0094 (15) | −0.0018 (15) |
| N4 | 0.0217 (19) | 0.029 (2) | 0.0139 (18) | 0.0027 (16) | 0.0087 (15) | 0.0016 (16) |
| N5 | 0.0205 (19) | 0.019 (2) | 0.023 (2) | −0.0030 (16) | 0.0070 (16) | −0.0041 (16) |
| N6 | 0.026 (2) | 0.023 (2) | 0.0179 (19) | −0.0030 (18) | 0.0063 (17) | 0.0031 (18) |
| N7 | 0.050 (3) | 0.035 (3) | 0.031 (2) | −0.018 (2) | 0.004 (2) | −0.006 (2) |
| C1 | 0.032 (3) | 0.033 (3) | 0.020 (2) | −0.006 (2) | 0.017 (2) | −0.004 (2) |
| C2 | 0.049 (3) | 0.023 (3) | 0.026 (3) | −0.001 (2) | 0.017 (2) | 0.004 (2) |
| C3 | 0.037 (3) | 0.022 (2) | 0.022 (2) | 0.000 (2) | 0.014 (2) | −0.0031 (19) |
| C4 | 0.022 (2) | 0.027 (3) | 0.019 (2) | 0.0011 (19) | 0.0094 (18) | 0.0003 (19) |
| C5 | 0.018 (2) | 0.020 (2) | 0.014 (2) | −0.0006 (17) | 0.0074 (17) | −0.0007 (17) |
| O1W | 0.0229 (19) | 0.051 (3) | 0.037 (2) | −0.0086 (18) | 0.0013 (17) | 0.021 (2) |
| Co1—O1W | 2.069 (4) | N4—C5 | 1.341 (5) |
| Co1—N1i | 2.111 (4) | N5—N6 | 1.198 (5) |
| Co1—N5ii | 2.128 (4) | N5—Co1ii | 2.128 (4) |
| Co1—O1 | 2.140 (3) | N6—N7 | 1.147 (6) |
| Co1—N5 | 2.163 (4) | C1—C2 | 1.416 (7) |
| Co1—N4 | 2.259 (4) | C1—H1A | 0.9300 |
| O1—N3 | 1.334 (5) | C2—C3 | 1.357 (7) |
| N1—N2 | 1.343 (5) | C2—H2A | 0.9300 |
| N1—C4 | 1.365 (6) | C3—C4 | 1.392 (7) |
| N1—Co1iii | 2.111 (4) | C3—H3A | 0.9300 |
| N2—N3 | 1.323 (5) | C4—C5 | 1.371 (6) |
| N3—C5 | 1.335 (6) | O1W—H1WB | 0.74 (7) |
| N4—C1 | 1.295 (6) | O1W—H1WA | 0.84 (8) |
| O1W—Co1—N1i | 86.72 (16) | C1—N4—Co1 | 144.3 (3) |
| O1W—Co1—N5ii | 174.45 (17) | C5—N4—Co1 | 103.4 (3) |
| N1i—Co1—N5ii | 95.61 (15) | N6—N5—Co1ii | 122.8 (3) |
| O1W—Co1—O1 | 90.03 (15) | N6—N5—Co1 | 130.7 (3) |
| N1i—Co1—O1 | 173.20 (13) | Co1ii—N5—Co1 | 102.40 (15) |
| N5ii—Co1—O1 | 88.16 (14) | N7—N6—N5 | 179.2 (5) |
| O1W—Co1—N5 | 97.02 (17) | N4—C1—C2 | 124.2 (4) |
| N1i—Co1—N5 | 101.43 (15) | N4—C1—H1A | 117.9 |
| N5ii—Co1—N5 | 77.60 (15) | C2—C1—H1A | 117.9 |
| O1—Co1—N5 | 84.88 (13) | C3—C2—C1 | 121.3 (5) |
| O1W—Co1—N4 | 89.00 (17) | C3—C2—H2A | 119.4 |
| N1i—Co1—N4 | 93.61 (14) | C1—C2—H2A | 119.4 |
| N5ii—Co1—N4 | 95.87 (14) | C2—C3—C4 | 116.4 (4) |
| O1—Co1—N4 | 80.35 (12) | C2—C3—H3A | 121.8 |
| N5—Co1—N4 | 164.06 (14) | C4—C3—H3A | 121.8 |
| N3—O1—Co1 | 107.4 (2) | N1—C4—C5 | 107.7 (4) |
| N2—N1—C4 | 107.9 (4) | N1—C4—C3 | 136.2 (4) |
| N2—N1—Co1iii | 118.9 (3) | C5—C4—C3 | 116.1 (4) |
| C4—N1—Co1iii | 133.2 (3) | N3—C5—N4 | 124.4 (4) |
| N3—N2—N1 | 107.4 (3) | N3—C5—C4 | 105.8 (4) |
| N2—N3—O1 | 124.8 (3) | N4—C5—C4 | 129.8 (4) |
| N2—N3—C5 | 111.2 (3) | Co1—O1W—H1WB | 111 (5) |
| O1—N3—C5 | 124.0 (3) | Co1—O1W—H1WA | 125 (5) |
| C1—N4—C5 | 112.2 (4) | H1WB—O1W—H1WA | 105 (7) |
| O1W—Co1—O1—N3 | −93.8 (3) | N5ii—Co1—N5—Co1ii | 0.0 |
| N1i—Co1—O1—N3 | −32.4 (12) | O1—Co1—N5—Co1ii | −89.23 (15) |
| N5ii—Co1—O1—N3 | 91.4 (3) | N4—Co1—N5—Co1ii | −67.1 (5) |
| N5—Co1—O1—N3 | 169.1 (3) | Co1ii—N5—N6—N7 | 91 (38) |
| N4—Co1—O1—N3 | −4.9 (2) | Co1—N5—N6—N7 | −116 (38) |
| C4—N1—N2—N3 | 0.9 (5) | C5—N4—C1—C2 | 0.0 (7) |
| Co1iii—N1—N2—N3 | 179.0 (3) | Co1—N4—C1—C2 | −177.8 (4) |
| N1—N2—N3—O1 | 179.9 (4) | N4—C1—C2—C3 | 1.3 (8) |
| N1—N2—N3—C5 | 0.1 (5) | C1—C2—C3—C4 | −0.6 (8) |
| Co1—O1—N3—N2 | −174.8 (3) | N2—N1—C4—C5 | −1.5 (5) |
| Co1—O1—N3—C5 | 4.9 (5) | Co1iii—N1—C4—C5 | −179.3 (3) |
| O1W—Co1—N4—C1 | −87.4 (6) | N2—N1—C4—C3 | 176.7 (5) |
| N1i—Co1—N4—C1 | −0.8 (6) | Co1iii—N1—C4—C3 | −1.1 (8) |
| N5ii—Co1—N4—C1 | 95.3 (6) | C2—C3—C4—N1 | −179.2 (5) |
| O1—Co1—N4—C1 | −177.6 (6) | C2—C3—C4—C5 | −1.1 (7) |
| N5—Co1—N4—C1 | 160.0 (5) | N2—N3—C5—N4 | 179.1 (4) |
| O1W—Co1—N4—C5 | 94.7 (3) | O1—N3—C5—N4 | −0.7 (6) |
| N1i—Co1—N4—C5 | −178.7 (3) | N2—N3—C5—C4 | −1.1 (5) |
| N5ii—Co1—N4—C5 | −82.7 (3) | O1—N3—C5—C4 | 179.1 (4) |
| O1—Co1—N4—C5 | 4.5 (3) | C1—N4—C5—N3 | 177.6 (4) |
| N5—Co1—N4—C5 | −17.9 (6) | Co1—N4—C5—N3 | −3.7 (5) |
| O1W—Co1—N5—N6 | 24.1 (4) | C1—N4—C5—C4 | −2.2 (7) |
| N1i—Co1—N5—N6 | −64.0 (4) | Co1—N4—C5—C4 | 176.5 (4) |
| N5ii—Co1—N5—N6 | −157.3 (5) | N1—C4—C5—N3 | 1.6 (5) |
| O1—Co1—N5—N6 | 113.5 (4) | C3—C4—C5—N3 | −177.0 (4) |
| N4—Co1—N5—N6 | 135.6 (5) | N1—C4—C5—N4 | −178.6 (4) |
| O1W—Co1—N5—Co1ii | −178.63 (17) | C3—C4—C5—N4 | 2.8 (7) |
| N1i—Co1—N5—Co1ii | 93.31 (16) |
| H··· | ||||
| O1W—H1WB···N7iv | 0.74 (7) | 2.15 (7) | 2.894 (6) | 178 (7) |
| O1W—H1WA···O1v | 0.84 (8) | 1.87 (8) | 2.661 (5) | 156 (8) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.74 (7) | 2.15 (7) | 2.894 (6) | 178 (7) |
| O1 | 0.84 (8) | 1.87 (8) | 2.661 (5) | 156 (8) |
Symmetry codes: (i) ; (ii) .