| Literature DB >> 21587703 |
Mohammad T M Al-Dajani, Hassan H Abdallah, Nornisah Mohamed, Madhukar Hemamalini, Hoong-Kun Fun.
Abstract
The title complex, [Cu(C(4)H(5)O(6))(2)(H(2)O)(2)]·2H(2)O, contains a Cu(II) ion lying on an inversion centre. The coordination geometry of the Cu(II) ion is a distorted octa-hedron with four O atoms from two hydrogen tartrate ions occupying the equatorial positions and two O atoms from two coordinated water mol-ecules occupying the axial positions. In the crystal structure, inter-molecular O-H⋯O and C-H⋯O hydrogen bonds link the mol-ecules into a three-dimensional network.Entities:
Year: 2010 PMID: 21587703 PMCID: PMC3006888 DOI: 10.1107/S160053681002115X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu(C4H5O6)2(H2O)2]·2H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 6852 reflections |
| θ = 3.6–35.0° | |
| µ = 1.54 mm−1 | |
| β = 109.136 (2)° | Plate, blue |
| 0.42 × 0.15 × 0.08 mm | |
| Bruker APEXII DUO CCD area-detector diffractometer | 3298 independent reflections |
| Radiation source: fine-focus sealed tube | 3001 reflections with |
| graphite | |
| φ and ω scans | θmax = 35.0°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 12361 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3298 reflections | (Δ/σ)max = 0.001 |
| 121 parameters | Δρmax = 0.68 e Å−3 |
| 0 restraints | Δρmin = −0.45 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cu1 | 0.5000 | 0.0000 | 0.0000 | 0.00746 (6) | |
| O1 | 0.39754 (10) | 0.03576 (5) | 0.18906 (9) | 0.00912 (12) | |
| O2 | 0.75259 (11) | 0.04633 (5) | 0.16577 (9) | 0.00829 (12) | |
| O3 | 0.48127 (11) | 0.11064 (5) | 0.45343 (10) | 0.00963 (12) | |
| O4 | 0.69066 (11) | 0.24378 (5) | 0.22934 (10) | 0.00920 (12) | |
| H4 | 0.6209 | 0.2764 | 0.2705 | 0.014* | |
| O5 | 1.08144 (12) | 0.25669 (5) | 0.29938 (12) | 0.01450 (14) | |
| O6 | 1.13354 (11) | 0.12193 (5) | 0.45912 (10) | 0.01096 (13) | |
| H6 | 1.2407 | 0.1230 | 0.4424 | 0.016* | |
| C1 | 0.52178 (13) | 0.07526 (6) | 0.32500 (12) | 0.00733 (14) | |
| C2 | 0.73709 (13) | 0.08036 (6) | 0.33188 (11) | 0.00687 (14) | |
| H2 | 0.8181 | 0.0405 | 0.4303 | 0.008* | |
| C3 | 0.80915 (13) | 0.18289 (6) | 0.36467 (12) | 0.00714 (14) | |
| H3 | 0.8008 | 0.2036 | 0.4805 | 0.009* | |
| C4 | 1.02337 (14) | 0.19094 (6) | 0.37032 (12) | 0.00806 (14) | |
| O1W | 0.46452 (11) | 0.16624 (5) | −0.10244 (10) | 0.01087 (13) | |
| H11 | 0.3385 | 0.1878 | −0.1356 | 0.016* | |
| H12 | 0.5389 | 0.1917 | 0.0120 | 0.016* | |
| O2W | 0.94287 (12) | 0.05593 (6) | 0.78307 (13) | 0.01680 (16) | |
| H21 | 0.8316 | 0.0315 | 0.7943 | 0.025* | |
| H22 | 0.9492 | 0.1191 | 0.7909 | 0.025* | |
| H5 | 0.832 (5) | 0.0119 (17) | 0.174 (4) | 0.034 (7)* |
| Cu1 | 0.00525 (8) | 0.00959 (9) | 0.00761 (8) | −0.00150 (5) | 0.00221 (6) | −0.00224 (4) |
| O1 | 0.0068 (3) | 0.0113 (3) | 0.0093 (3) | −0.0019 (2) | 0.0027 (2) | −0.0022 (2) |
| O2 | 0.0063 (3) | 0.0096 (3) | 0.0089 (3) | 0.0004 (2) | 0.0025 (2) | −0.0024 (2) |
| O3 | 0.0082 (3) | 0.0113 (3) | 0.0103 (3) | −0.0005 (2) | 0.0042 (2) | −0.0021 (2) |
| O4 | 0.0084 (3) | 0.0086 (3) | 0.0103 (3) | 0.0030 (2) | 0.0026 (2) | 0.0020 (2) |
| O5 | 0.0092 (3) | 0.0115 (3) | 0.0228 (4) | −0.0008 (2) | 0.0052 (3) | 0.0063 (3) |
| O6 | 0.0064 (3) | 0.0098 (3) | 0.0168 (3) | 0.0018 (2) | 0.0041 (2) | 0.0043 (2) |
| C1 | 0.0068 (3) | 0.0063 (3) | 0.0089 (3) | 0.0001 (3) | 0.0026 (3) | 0.0008 (3) |
| C2 | 0.0055 (3) | 0.0071 (3) | 0.0080 (3) | −0.0003 (2) | 0.0021 (3) | −0.0006 (3) |
| C3 | 0.0061 (3) | 0.0068 (3) | 0.0083 (3) | 0.0001 (3) | 0.0019 (3) | 0.0002 (2) |
| C4 | 0.0071 (3) | 0.0073 (3) | 0.0093 (3) | −0.0003 (3) | 0.0021 (3) | −0.0010 (3) |
| O1W | 0.0090 (3) | 0.0101 (3) | 0.0127 (3) | 0.0002 (2) | 0.0024 (2) | 0.0003 (2) |
| O2W | 0.0104 (3) | 0.0101 (3) | 0.0321 (4) | 0.0008 (2) | 0.0098 (3) | 0.0007 (3) |
| Cu1—O1 | 1.9327 (7) | O5—C4 | 1.2239 (12) |
| Cu1—O1i | 1.9327 (7) | O6—C4 | 1.3027 (11) |
| Cu1—O2i | 1.9637 (7) | O6—H6 | 0.8200 |
| Cu1—O2 | 1.9637 (7) | C1—C2 | 1.5259 (13) |
| Cu1—O1W | 2.4651 (8) | C2—C3 | 1.5281 (13) |
| Cu1—O1Wi | 2.4651 (8) | C2—H2 | 0.9800 |
| O1—C1 | 1.2753 (11) | C3—C4 | 1.5235 (13) |
| O2—C2 | 1.4339 (11) | C3—H3 | 0.9800 |
| O2—H5 | 0.73 (3) | O1W—H11 | 0.9051 |
| O3—C1 | 1.2461 (11) | O1W—H12 | 0.9551 |
| O4—C3 | 1.4152 (11) | O2W—H21 | 0.8982 |
| O4—H4 | 0.8200 | O2W—H22 | 0.8936 |
| O1—Cu1—O1W | 88.90 (3) | O3—C1—C2 | 116.99 (8) |
| O1—Cu1—O1Wi | 91.11 (3) | O1—C1—C2 | 117.92 (8) |
| O1W—Cu1—O2 | 82.85 (3) | O2—C2—C1 | 109.36 (7) |
| O1W—Cu1—O1Wi | 180 | O2—C2—C3 | 110.39 (7) |
| O1W—Cu1—O2 | 82.85 (3) | C1—C2—C3 | 109.36 (7) |
| O1Wi—Cu1—O2i | 82.85 (3) | O2—C2—H2 | 109.2 |
| O1i—Cu1—O1Wi | 88.90 (3) | C1—C2—H2 | 109.2 |
| O1—Cu1—O1i | 180.00 (6) | C3—C2—H2 | 109.2 |
| O1—Cu1—O2i | 95.83 (3) | O4—C3—C4 | 108.99 (7) |
| O1i—Cu1—O2i | 84.17 (3) | O4—C3—C2 | 111.13 (7) |
| O1—Cu1—O2 | 84.17 (3) | C4—C3—C2 | 110.86 (7) |
| O1i—Cu1—O2 | 95.83 (3) | O4—C3—H3 | 108.6 |
| O2i—Cu1—O2 | 180.0 | C4—C3—H3 | 108.6 |
| C1—O1—Cu1 | 115.26 (6) | C2—C3—H3 | 108.6 |
| C2—O2—Cu1 | 112.96 (5) | O5—C4—O6 | 125.12 (9) |
| C2—O2—H5 | 116 (2) | O5—C4—C3 | 122.17 (8) |
| Cu1—O2—H5 | 111 (2) | O6—C4—C3 | 112.71 (8) |
| C3—O4—H4 | 109.5 | H11—O1W—H12 | 110.0 |
| C4—O6—H6 | 109.5 | H21—O2W—H22 | 113.7 |
| O3—C1—O1 | 125.09 (9) | ||
| O2i—Cu1—O1—C1 | −176.70 (7) | O3—C1—C2—O2 | −173.54 (8) |
| O2—Cu1—O1—C1 | 3.30 (7) | O1—C1—C2—O2 | 6.20 (11) |
| O1—Cu1—O2—C2 | 0.36 (6) | O3—C1—C2—C3 | −52.55 (10) |
| O1i—Cu1—O2—C2 | −179.64 (6) | O1—C1—C2—C3 | 127.19 (8) |
| O1W—Cu1—O1—C1 | −79.64 (6) | O2—C2—C3—O4 | 62.36 (9) |
| O1Wi—Cu1—O1—C1 | 100.37 (6) | C1—C2—C3—O4 | −58.01 (9) |
| O1W—Cu1—O2—C2 | 89.98 (6) | O2—C2—C3—C4 | −59.01 (9) |
| O1Wi—Cu1—O2—C2 | −90.02 (6) | C1—C2—C3—C4 | −179.37 (7) |
| Cu1—O1—C1—O3 | 173.56 (7) | O4—C3—C4—O5 | 16.25 (12) |
| Cu1—O1—C1—C2 | −6.17 (10) | C2—C3—C4—O5 | 138.88 (9) |
| Cu1—O2—C2—C1 | −3.22 (9) | O4—C3—C4—O6 | −164.52 (8) |
| Cu1—O2—C2—C3 | −123.59 (6) | C2—C3—C4—O6 | −41.90 (10) |
| H··· | ||||
| O4—H4···O1Wii | 0.82 | 1.91 | 2.7200 (12) | 170 |
| O2—H5···O2Wiii | 0.72 (3) | 1.82 (3) | 2.5331 (12) | 170 (3) |
| O6—H6···O3iv | 0.82 | 1.70 | 2.5092 (12) | 167 |
| O1W—H11···O5v | 0.91 | 1.91 | 2.8119 (11) | 175 (1) |
| O1W—H12···O4 | 0.96 | 1.85 | 2.8091 (11) | 177 |
| O2W—H21···O1vi | 0.90 | 1.94 | 2.8298 (12) | 173 |
| O2W—H22···O5ii | 0.89 | 1.98 | 2.8100 (12) | 154 |
| C2—H2···O6iii | 0.98 | 2.43 | 3.2727 (12) | 143 |
| C3—H3···O4ii | 0.98 | 2.46 | 3.4160 (13) | 166 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H4⋯O1 | 0.82 | 1.91 | 2.7200 (12) | 170 |
| O2—H5⋯O2 | 0.72 (3) | 1.82 (3) | 2.5331 (12) | 170 (3) |
| O6—H6⋯O3iii | 0.82 | 1.70 | 2.5092 (12) | 167 |
| O1 | 0.91 | 1.91 | 2.8119 (11) | 175 (1) |
| O1 | 0.96 | 1.85 | 2.8091 (11) | 177 |
| O2 | 0.90 | 1.94 | 2.8298 (12) | 173 |
| O2 | 0.89 | 1.98 | 2.8100 (12) | 154 |
| C2—H2⋯O6ii | 0.98 | 2.43 | 3.2727 (12) | 143 |
| C3—H3⋯O4i | 0.98 | 2.46 | 3.4160 (13) | 166 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .