Literature DB >> 21587681

Poly[tetra-kis-(seleno-cyanato-κN)bis-(methanol-κO)tris-(μ-pyrimidine-κN:N')dicobalt(II)].

Mario Wriedt1, Inke Jess, Christian Näther.   

Abstract

In the title compound, [Co(2)(NCSe)(4)(C(4)H(4)N(2))(3)(CH(3)OH)(2)](n), the Co(II) ion is coordinated by three N-bonded pyrimidine ligands, two N-bonded seleno-cyanate anions and one O-bonded methanol mol-ecule in an octa-hedral coordination mode. The asymmetric unit consists of one Co(II) ion, one pyrimidine ligand, two seleno-cyanate anions and one methanol mol-ecule in general positions as well as one pyrimidine ligand located around a twofold rotation axis. In the crystal structure, the pyrimidine ligands bridge [Co(CNSe)(2)(CH(3)OH)] units into zigzag-like chains, which are further connected by pyrimidine ligands into layers parallel to (010).

Entities:  

Year:  2010        PMID: 21587681      PMCID: PMC3007058          DOI: 10.1107/S160053681002060X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Wriedt & Näther (2009a ▶,b ▶); Wriedt, Sellmer & Näther (2009a ▶,b ▶). For the isotypic structure of a nickel thio­cyanato complex, see: Wriedt et al. (2009 ▶).

Experimental

Crystal data

[Co2(CNSe)4(C4H4N2)3(CH4O)2] M = 421.07 Orthorhombic, a = 20.4069 (8) Å b = 33.0633 (15) Å c = 8.3750 (3) Å V = 5650.8 (4) Å3 Z = 16 Mo Kα radiation μ = 6.36 mm−1 T = 293 K 0.16 × 0.11 × 0.02 mm

Data collection

Stoe IPDS-2 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2002 ▶) T min = 0.431, T max = 0.885 18545 measured reflections 3391 independent reflections 3067 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.069 S = 1.16 3391 reflections 164 parameters 1 restraint H-atom parameters constrained Δρmax = 0.55 e Å−3 Δρmin = −0.35 e Å−3 Absolute structure: Flack (1983 ▶), 1579 Friedel pairs Flack parameter: 0.057 (13) Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681002060X/hy2313sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681002060X/hy2313Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Co2(CNSe)4(C4H4N2)3(CH4O)2]F(000) = 3232
Mr = 421.07Dx = 1.980 Mg m3
Orthorhombic, Fdd2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: F 2 -2dCell parameters from 18545 reflections
a = 20.4069 (8) Åθ = 2.4–28.0°
b = 33.0633 (15) ŵ = 6.36 mm1
c = 8.3750 (3) ÅT = 293 K
V = 5650.8 (4) Å3Block, light pink
Z = 160.16 × 0.11 × 0.02 mm
Stoe IPDS-2 diffractometer3391 independent reflections
Radiation source: fine-focus sealed tube3067 reflections with I > 2σ(I)
graphiteRint = 0.044
ω scansθmax = 28.0°, θmin = 2.4°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2002)h = −26→26
Tmin = 0.431, Tmax = 0.885k = −43→43
18545 measured reflectionsl = −11→10
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.038H-atom parameters constrained
wR(F2) = 0.069w = 1/[σ2(Fo2) + (0.0286P)2 + 8.8704P] where P = (Fo2 + 2Fc2)/3
S = 1.16(Δ/σ)max < 0.001
3391 reflectionsΔρmax = 0.55 e Å3
164 parametersΔρmin = −0.35 e Å3
1 restraintAbsolute structure: Flack (1983), 1579 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.057 (13)
xyzUiso*/Ueq
Co10.60574 (2)0.227474 (17)0.78759 (6)0.03270 (12)
N10.55104 (15)0.27269 (10)0.6504 (4)0.0360 (8)
N20.47521 (15)0.28919 (10)0.4458 (5)0.0382 (7)
C10.50711 (17)0.26316 (13)0.5388 (6)0.0374 (9)
H10.49790.23580.52460.045*
C20.4883 (2)0.32854 (13)0.4677 (6)0.0412 (9)
H20.46720.34770.40480.049*
C30.5320 (2)0.34078 (14)0.5813 (6)0.0459 (11)
H30.54100.36810.59590.055*
C40.5623 (2)0.31226 (13)0.6730 (6)0.0434 (10)
H40.59120.32040.75260.052*
N110.69371 (15)0.24124 (11)0.6493 (4)0.0352 (8)
C110.75000.25000.7228 (7)0.0372 (12)
H110.75000.25000.83390.045*
C130.75000.25000.4059 (8)0.061 (2)
H130.75000.25000.29480.074*
C140.6944 (2)0.24140 (17)0.4914 (6)0.0499 (12)
H140.65590.23550.43660.060*
N210.57994 (17)0.18287 (12)0.6270 (5)0.0434 (8)
C210.56005 (17)0.15562 (13)0.5553 (5)0.0381 (9)
Se210.53008 (3)0.114405 (17)0.44108 (7)0.06121 (16)
N310.63231 (16)0.26940 (12)0.9575 (5)0.0428 (8)
C310.63448 (17)0.29139 (13)1.0643 (5)0.0373 (9)
Se310.63665 (3)0.324181 (19)1.23170 (7)0.06461 (17)
O410.66187 (15)0.18255 (10)0.9111 (4)0.0522 (8)
C410.6758 (4)0.1790 (2)1.0749 (8)0.085 (2)
H41A0.63590.17471.13280.127*
H41B0.69640.20341.11180.127*
H41C0.70480.15661.09180.127*
H1O40.68620.17920.83520.127*
U11U22U33U12U13U23
Co10.0252 (2)0.0341 (3)0.0388 (3)−0.0009 (2)−0.0010 (2)−0.0043 (2)
N10.0287 (15)0.0336 (18)0.046 (2)−0.0015 (13)−0.0036 (13)0.0000 (15)
N20.0294 (14)0.0376 (17)0.048 (2)−0.0013 (14)−0.0020 (14)0.0017 (17)
C10.0270 (16)0.036 (2)0.049 (2)0.0006 (15)−0.0018 (18)−0.0026 (19)
C20.045 (2)0.033 (2)0.045 (2)0.0008 (17)−0.0001 (19)0.0031 (19)
C30.059 (3)0.029 (2)0.049 (3)−0.0082 (19)0.003 (2)−0.0002 (19)
C40.048 (2)0.039 (2)0.043 (2)−0.0022 (18)−0.0087 (19)−0.0029 (19)
N110.0268 (14)0.0419 (19)0.037 (2)−0.0028 (13)−0.0005 (13)0.0017 (14)
C110.029 (2)0.050 (3)0.032 (3)0.000 (2)0.0000.000
C130.046 (4)0.108 (7)0.030 (4)−0.001 (4)0.0000.000
C140.0295 (19)0.075 (3)0.045 (3)−0.005 (2)−0.0032 (18)−0.003 (2)
N210.0422 (18)0.040 (2)0.048 (2)0.0000 (16)−0.0047 (16)−0.0091 (17)
C210.0304 (16)0.043 (2)0.042 (2)0.0029 (16)0.0016 (17)0.002 (2)
Se210.0661 (3)0.0505 (3)0.0670 (4)−0.0056 (2)−0.0100 (3)−0.0199 (3)
N310.0419 (18)0.045 (2)0.042 (2)−0.0081 (16)0.0024 (16)−0.0071 (18)
C310.0276 (17)0.039 (2)0.046 (3)−0.0020 (15)0.0036 (16)0.003 (2)
Se310.0715 (3)0.0632 (4)0.0592 (3)−0.0041 (3)0.0086 (3)−0.0256 (3)
O410.0456 (16)0.054 (2)0.057 (2)0.0146 (15)−0.0044 (15)0.0063 (16)
C410.101 (5)0.071 (4)0.082 (5)0.002 (4)−0.047 (4)0.007 (3)
Co1—N12.191 (3)N11—C111.335 (4)
Co1—N2i2.188 (3)C11—N11ii1.335 (4)
Co1—N112.184 (3)C11—H110.9300
Co1—N212.064 (4)C13—C141.372 (6)
Co1—N312.059 (4)C13—C14ii1.372 (6)
Co1—O412.142 (3)C13—H130.9300
N1—C11.333 (5)C14—H140.9300
N1—C41.342 (5)N21—C211.157 (5)
N2—C11.331 (5)C21—Se211.774 (5)
N2—C21.341 (5)N31—C311.154 (5)
C1—H10.9300C31—Se311.773 (4)
C2—C31.366 (6)O41—C411.405 (7)
C2—H20.9300O41—H1O40.8139
C3—C41.364 (7)C41—H41A0.9600
C3—H30.9300C41—H41B0.9600
C4—H40.9300C41—H41C0.9600
N11—C141.323 (6)
N31—Co1—N21176.69 (16)C2—C3—H3120.6
N31—Co1—O4189.55 (15)N1—C4—C3121.2 (4)
N21—Co1—O4187.46 (14)N1—C4—H4119.4
N31—Co1—N1190.55 (13)C3—C4—H4119.4
N21—Co1—N1190.75 (14)C14—N11—C11116.8 (4)
O41—Co1—N1187.77 (13)C14—N11—Co1122.6 (3)
N31—Co1—N2i87.12 (14)C11—N11—Co1120.5 (3)
N21—Co1—N2i91.27 (14)N11—C11—N11ii125.1 (5)
O41—Co1—N2i86.37 (13)N11—C11—H11117.5
N11—Co1—N2i173.71 (13)N11ii—C11—H11117.5
N31—Co1—N192.13 (14)C14—C13—C14ii117.1 (6)
N21—Co1—N190.91 (14)C14—C13—H13121.5
O41—Co1—N1177.16 (14)C14ii—C13—H13121.5
N11—Co1—N189.92 (12)N11—C14—C13122.1 (4)
N2i—Co1—N196.00 (13)N11—C14—H14118.9
C1—N1—C4116.4 (4)C13—C14—H14118.9
C1—N1—Co1123.3 (3)C21—N21—Co1169.9 (4)
C4—N1—Co1120.3 (3)N21—C21—Se21178.7 (4)
C1—N2—C2116.8 (4)C31—N31—Co1166.0 (3)
C1—N2—Co1iii124.1 (3)N31—C31—Se31178.4 (4)
C2—N2—Co1iii118.5 (3)C41—O41—Co1129.6 (4)
N2—C1—N1125.9 (4)C41—O41—H1O4128.9
N2—C1—H1117.0Co1—O41—H1O492.4
N1—C1—H1117.0O41—C41—H41A109.5
N2—C2—C3120.8 (4)O41—C41—H41B109.5
N2—C2—H2119.6H41A—C41—H41B109.5
C3—C2—H2119.6O41—C41—H41C109.5
C4—C3—C2118.9 (4)H41A—C41—H41C109.5
C4—C3—H3120.6H41B—C41—H41C109.5
Table 1

Selected bond lengths (Å)

Co1—N12.191 (3)
Co1—N2i2.188 (3)
Co1—N112.184 (3)
Co1—N212.064 (4)
Co1—N312.059 (4)
Co1—O412.142 (3)

Symmetry code: (i) .

  5 in total

1.  Thermal decomposition reactions as tool for the synthesis of new metal thiocyanate diazine coordination polymers with cooperative magnetic phenomena.

Authors:  Mario Wriedt; Sina Sellmer; Christian Näther
Journal:  Inorg Chem       Date:  2009-07-20       Impact factor: 5.165

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Coordination polymer changing its magnetic properties and colour by thermal decomposition: synthesis, structure and properties of new thiocyanato iron(II) coordination polymers based on 4,4'-bipyridine as ligand.

Authors:  Mario Wriedt; Sina Sellmer; Christian Näther
Journal:  Dalton Trans       Date:  2009-08-12       Impact factor: 4.390

4.  In situ solid state formation of copper(I) coordination polymers by thermal reduction of copper(II) precursor compounds: structure and reactivity of [Cu(NCS)2(pyrimidine)2]n.

Authors:  Mario Wriedt; Christian Näther
Journal:  Dalton Trans       Date:  2009-08-28       Impact factor: 4.390

5.  Poly[bis-(methanol-κO)tris-(μ-pyrimidine-κN:N')tetra-kis(thio-cyanato-κN)dinickel(II)].

Authors:  Mario Wriedt; Sina Sellmer; Inke Jess; Christian Näther
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-06
  5 in total
  1 in total

1.  Poly[diaqua-tetra-μ-seleno-cyanato-cadmium(II)dipotassium(I)].

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