| Literature DB >> 21587654 |
Abstract
The title compound, C(10)H(13)N(3)S, was prepared by the reaction of 4-ethyl-thio-semicarbazide and benzaldehyde. The dihedral angle between the benzene ring and the thio-urea unit is 8.96 (7)° and an intra-molecular N-H⋯N hydrogen bond generates an S(5) ring. In the crystal, inversion dimers linked by pairs of N-H⋯S hydrogen bonds generate R(2) (2)(8) loops.Entities:
Year: 2010 PMID: 21587654 PMCID: PMC2983406 DOI: 10.1107/S1600536810038444
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H13N3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2596 reflections |
| θ = 3.0–27.5° | |
| µ = 0.25 mm−1 | |
| β = 96.04 (3)° | Block, colorless |
| 0.22 × 0.20 × 0.18 mm | |
| Bruker SMART CCD diffractometer | 2118 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 27.5°, θmin = 3.0° |
| phi and ω scans | |
| 10048 measured reflections | |
| 2596 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2596 reflections | (Δ/σ)max < 0.001 |
| 127 parameters | Δρmax = 0.30 e Å−3 |
| 0 restraints | Δρmin = −0.40 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.28967 (7) | 0.39580 (4) | −0.07292 (4) | 0.0744 (2) | |
| N1 | 0.25491 (17) | 0.29999 (11) | 0.15603 (14) | 0.0596 (4) | |
| H1A | 0.2916 | 0.2862 | 0.2372 | 0.072* | |
| N2 | 0.46620 (17) | 0.40411 (10) | 0.15771 (13) | 0.0537 (3) | |
| H2A | 0.5279 | 0.4416 | 0.1171 | 0.064* | |
| N3 | 0.50010 (15) | 0.38467 (9) | 0.29257 (13) | 0.0479 (3) | |
| C4 | 0.61893 (18) | 0.43036 (12) | 0.35133 (16) | 0.0504 (4) | |
| H4A | 0.6768 | 0.4724 | 0.3014 | 0.061* | |
| C3 | 0.3357 (2) | 0.36416 (12) | 0.08914 (15) | 0.0516 (4) | |
| C5 | 0.66728 (17) | 0.41886 (11) | 0.49435 (16) | 0.0473 (3) | |
| C6 | 0.5847 (2) | 0.35906 (13) | 0.57650 (17) | 0.0566 (4) | |
| H6A | 0.4966 | 0.3235 | 0.5399 | 0.068* | |
| C10 | 0.7983 (2) | 0.47106 (14) | 0.55174 (19) | 0.0624 (4) | |
| H10A | 0.8542 | 0.5117 | 0.4983 | 0.075* | |
| C7 | 0.6330 (3) | 0.35251 (16) | 0.71139 (19) | 0.0721 (5) | |
| H7A | 0.5773 | 0.3125 | 0.7658 | 0.087* | |
| C9 | 0.8465 (2) | 0.46324 (17) | 0.6869 (2) | 0.0765 (6) | |
| H9A | 0.9356 | 0.4977 | 0.7238 | 0.092* | |
| C8 | 0.7637 (3) | 0.40488 (16) | 0.7670 (2) | 0.0775 (6) | |
| H8A | 0.7953 | 0.4005 | 0.8586 | 0.093* | |
| C1 | −0.0363 (3) | 0.3091 (2) | 0.1253 (3) | 0.1024 (9) | |
| H1B | −0.1290 | 0.2740 | 0.0876 | 0.154* | |
| H1C | −0.0324 | 0.3729 | 0.0832 | 0.154* | |
| H1D | −0.0405 | 0.3176 | 0.2200 | 0.154* | |
| C2 | 0.1083 (3) | 0.25096 (16) | 0.1020 (2) | 0.0777 (6) | |
| H2B | 0.1027 | 0.1862 | 0.1435 | 0.093* | |
| H2C | 0.1102 | 0.2410 | 0.0063 | 0.093* |
| S1 | 0.0973 (4) | 0.0820 (4) | 0.0422 (3) | −0.0240 (3) | −0.0006 (2) | 0.00516 (19) |
| N1 | 0.0682 (9) | 0.0602 (8) | 0.0491 (7) | −0.0158 (7) | 0.0001 (6) | 0.0046 (6) |
| N2 | 0.0586 (8) | 0.0584 (8) | 0.0443 (7) | −0.0070 (6) | 0.0066 (6) | 0.0044 (5) |
| N3 | 0.0514 (7) | 0.0472 (7) | 0.0451 (7) | 0.0009 (5) | 0.0046 (5) | 0.0014 (5) |
| C4 | 0.0470 (8) | 0.0513 (8) | 0.0534 (8) | −0.0022 (6) | 0.0070 (6) | 0.0066 (7) |
| C3 | 0.0598 (9) | 0.0503 (8) | 0.0450 (8) | −0.0013 (7) | 0.0070 (6) | −0.0036 (6) |
| C5 | 0.0444 (7) | 0.0436 (7) | 0.0533 (8) | 0.0039 (6) | 0.0026 (6) | 0.0001 (6) |
| C6 | 0.0599 (9) | 0.0524 (8) | 0.0572 (9) | −0.0016 (7) | 0.0049 (7) | 0.0063 (7) |
| C10 | 0.0529 (9) | 0.0616 (10) | 0.0714 (11) | −0.0050 (8) | 0.0000 (8) | −0.0015 (8) |
| C7 | 0.0932 (14) | 0.0654 (11) | 0.0584 (10) | 0.0106 (10) | 0.0110 (9) | 0.0107 (9) |
| C9 | 0.0693 (12) | 0.0740 (12) | 0.0806 (13) | 0.0041 (10) | −0.0182 (10) | −0.0179 (10) |
| C8 | 0.0976 (15) | 0.0781 (13) | 0.0528 (10) | 0.0246 (11) | −0.0108 (10) | −0.0087 (9) |
| C1 | 0.0765 (14) | 0.0977 (18) | 0.126 (2) | −0.0322 (14) | −0.0217 (14) | 0.0169 (15) |
| C2 | 0.0950 (15) | 0.0722 (12) | 0.0629 (11) | −0.0365 (11) | −0.0059 (10) | 0.0025 (9) |
| S1—C3 | 1.6838 (16) | C10—C9 | 1.376 (3) |
| N1—C3 | 1.328 (2) | C10—H10A | 0.9300 |
| N1—C2 | 1.462 (2) | C7—C8 | 1.382 (3) |
| N1—H1A | 0.8600 | C7—H7A | 0.9300 |
| N2—C3 | 1.352 (2) | C9—C8 | 1.370 (3) |
| N2—N3 | 1.3761 (18) | C9—H9A | 0.9300 |
| N2—H2A | 0.8600 | C8—H8A | 0.9300 |
| N3—C4 | 1.272 (2) | C1—C2 | 1.495 (4) |
| C4—C5 | 1.456 (2) | C1—H1B | 0.9600 |
| C4—H4A | 0.9300 | C1—H1C | 0.9600 |
| C5—C10 | 1.389 (2) | C1—H1D | 0.9600 |
| C5—C6 | 1.392 (2) | C2—H2B | 0.9700 |
| C6—C7 | 1.373 (2) | C2—H2C | 0.9700 |
| C6—H6A | 0.9300 | ||
| C3—N1—C2 | 124.92 (15) | C6—C7—C8 | 120.6 (2) |
| C3—N1—H1A | 117.5 | C6—C7—H7A | 119.7 |
| C2—N1—H1A | 117.5 | C8—C7—H7A | 119.7 |
| C3—N2—N3 | 119.89 (13) | C8—C9—C10 | 120.19 (19) |
| C3—N2—H2A | 120.1 | C8—C9—H9A | 119.9 |
| N3—N2—H2A | 120.1 | C10—C9—H9A | 119.9 |
| C4—N3—N2 | 115.84 (13) | C9—C8—C7 | 119.75 (19) |
| N3—C4—C5 | 122.10 (14) | C9—C8—H8A | 120.1 |
| N3—C4—H4A | 118.9 | C7—C8—H8A | 120.1 |
| C5—C4—H4A | 118.9 | C2—C1—H1B | 109.5 |
| N1—C3—N2 | 116.22 (14) | C2—C1—H1C | 109.5 |
| N1—C3—S1 | 124.84 (13) | H1B—C1—H1C | 109.5 |
| N2—C3—S1 | 118.92 (13) | C2—C1—H1D | 109.5 |
| C10—C5—C6 | 118.67 (15) | H1B—C1—H1D | 109.5 |
| C10—C5—C4 | 118.95 (15) | H1C—C1—H1D | 109.5 |
| C6—C5—C4 | 122.37 (14) | N1—C2—C1 | 112.78 (18) |
| C7—C6—C5 | 120.11 (17) | N1—C2—H2B | 109.0 |
| C7—C6—H6A | 119.9 | C1—C2—H2B | 109.0 |
| C5—C6—H6A | 119.9 | N1—C2—H2C | 109.0 |
| C9—C10—C5 | 120.71 (18) | C1—C2—H2C | 109.0 |
| C9—C10—H10A | 119.6 | H2B—C2—H2C | 107.8 |
| C5—C10—H10A | 119.6 |
| H··· | ||||
| N1—H1A···N3 | 0.86 | 2.23 | 2.628 (2) | 108 |
| N2—H2A···S1i | 0.86 | 2.74 | 3.5565 (16) | 158 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.23 | 2.628 (2) | 108 |
| N2—H2 | 0.86 | 2.74 | 3.5565 (16) | 158 |
Symmetry code: (i) .