Literature DB >> 21587641

[(Methyl-carbamothio-yl)disulfan-yl]methyl N-methyl-carbamodithio-ate.

Hizbullah Khan, Muhammad Aziz, Christine Neuhausen, Ghulam Murtaza, Farkhanda Shaheen.   

Abstract

The title compound, C(5)H(10)N(2)S(5), was unintentionally obtained as the product of an attempted synthesis of a methyl-carbamodithioic acid using methyl-amine and carbon disulfide. In the mol-ecule, two dithio-carbamate groups are bridged by a -CH(2)S- unit. The C-S-S-C torsion angle is -90.13 (11)°. The crystal structure is stabilized by N-H⋯S inter-actions between neighbouring mol-ecules. An intra-molecular N-H⋯S hydrogen bond also occurs.

Entities:  

Year:  2010        PMID: 21587641      PMCID: PMC2983331          DOI: 10.1107/S160053681003833X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For dithio­carbamate ligands, see: Cox et al. (1999 ▶); Liu & Bao (2007 ▶); Nair et al. (2002 ▶).

Experimental

Crystal data

C5H10N2S5 M = 258.45 Triclinic, a = 7.188 (1) Å b = 7.884 (2) Å c = 10.219 (2) Å α = 101.23 (3)° β = 96.85 (3)° γ = 102.74 (3)° V = 546.0 (2) Å3 Z = 2 Mo Kα radiation μ = 1.01 mm−1 T = 293 K 0.30 × 0.11 × 0.10 mm

Data collection

Stoe IPDS diffractometer 4080 measured reflections 2077 independent reflections 1924 reflections with I > 2σ(I) R int = 0.101

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.103 S = 1.15 2077 reflections 111 parameters H-atom parameters constrained Δρmax = 0.53 e Å−3 Δρmin = −0.37 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-RED32 (Stoe & Cie, 2002 ▶); data reduction: X-RED32; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2007 ▶); software used to prepare material for publication: enCIFer (Allen et al., 2004 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681003833X/om2358sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681003833X/om2358Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C5H10N2S5V = 546.0 (2) Å3
Mr = 258.45Z = 2
Triclinic, P1F(000) = 268
a = 7.188 (1) ÅDx = 1.572 Mg m3
b = 7.884 (2) ÅMo Kα radiation, λ = 0.71073 Å
c = 10.219 (2) ŵ = 1.01 mm1
α = 101.23 (3)°T = 293 K
β = 96.85 (3)°Needle, yellow
γ = 102.74 (3)°0.30 × 0.11 × 0.10 mm
Stoe IPDS diffractometer1924 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.101
graphiteθmax = 26.4°, θmin = 4.1°
ω scansh = −8→8
4080 measured reflectionsk = −9→9
2077 independent reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.15w = 1/[σ2(Fo2) + (0.0496P)2 + 0.0335P] where P = (Fo2 + 2Fc2)/3
2077 reflections(Δ/σ)max = 0.001
111 parametersΔρmax = 0.53 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.24777 (9)0.73176 (9)0.11879 (5)0.04736 (19)
S20.39011 (7)0.69015 (8)0.38202 (5)0.03952 (18)
S30.28393 (7)0.64232 (7)0.55098 (5)0.03611 (17)
S40.22813 (8)0.85040 (8)0.80525 (5)0.04221 (18)
S5−0.14480 (9)0.82971 (9)0.62019 (6)0.04559 (19)
N10.0187 (3)0.6694 (2)0.30088 (18)0.0370 (4)
H10.00900.65100.38030.044*
N2−0.1092 (3)0.7742 (3)0.86906 (19)0.0440 (5)
H2−0.03580.76390.93840.053*
C1−0.1562 (3)0.6703 (4)0.2139 (3)0.0485 (6)
H1A−0.13700.77990.18370.073*
H1B−0.26190.66040.26340.073*
H1C−0.18510.57130.13690.073*
C20.1897 (3)0.6948 (3)0.26569 (19)0.0333 (4)
C30.3067 (3)0.8671 (3)0.6478 (2)0.0390 (5)
H3A0.44020.93590.66360.047*
H3B0.22750.92670.59830.047*
C4−0.0280 (3)0.8118 (3)0.7646 (2)0.0346 (4)
C5−0.3151 (3)0.7494 (4)0.8732 (3)0.0488 (6)
H5A−0.34320.86380.89780.073*
H5B−0.34980.68120.93880.073*
H5C−0.38810.68670.78560.073*
U11U22U33U12U13U23
S10.0507 (4)0.0674 (4)0.0306 (3)0.0158 (3)0.0153 (2)0.0206 (3)
S20.0326 (3)0.0578 (4)0.0331 (3)0.0132 (2)0.0107 (2)0.0168 (3)
S30.0393 (3)0.0427 (3)0.0300 (3)0.0103 (2)0.0079 (2)0.0157 (2)
S40.0366 (3)0.0623 (4)0.0270 (3)0.0115 (3)0.0030 (2)0.0107 (3)
S50.0446 (3)0.0627 (4)0.0328 (3)0.0181 (3)0.0012 (2)0.0168 (3)
N10.0357 (9)0.0483 (10)0.0304 (8)0.0113 (8)0.0081 (7)0.0145 (8)
N20.0385 (10)0.0645 (12)0.0333 (9)0.0154 (9)0.0056 (8)0.0187 (9)
C10.0379 (13)0.0657 (15)0.0452 (12)0.0161 (11)0.0032 (10)0.0193 (12)
C20.0388 (11)0.0358 (9)0.0276 (9)0.0105 (8)0.0077 (8)0.0104 (8)
C30.0413 (11)0.0417 (11)0.0331 (10)0.0045 (9)0.0093 (9)0.0116 (9)
C40.0385 (11)0.0382 (10)0.0290 (9)0.0136 (8)0.0061 (8)0.0073 (8)
C50.0395 (13)0.0686 (16)0.0417 (12)0.0180 (12)0.0101 (10)0.0137 (12)
S1—C21.6671 (18)N2—C51.456 (3)
S2—C21.767 (2)N2—H20.8600
S2—S32.0364 (8)C1—H1A0.9600
S3—C31.816 (2)C1—H1B0.9600
S4—C41.782 (2)C1—H1C0.9600
S4—C31.787 (2)C3—H3A0.9700
S5—C41.655 (2)C3—H3B0.9700
N1—C21.306 (3)C5—H5A0.9600
N1—C11.453 (3)C5—H5B0.9600
N1—H10.8600C5—H5C0.9600
N2—C41.328 (3)
C2—S2—S3105.99 (7)S1—C2—S2113.24 (12)
C3—S3—S2101.85 (7)S4—C3—S3107.88 (10)
C4—S4—C3103.25 (10)S4—C3—H3A110.1
C2—N1—C1123.90 (17)S3—C3—H3A110.1
C2—N1—H1118.0S4—C3—H3B110.1
C1—N1—H1118.0S3—C3—H3B110.1
C4—N2—C5123.93 (18)H3A—C3—H3B108.4
C4—N2—H2118.0N2—C4—S5125.43 (17)
C5—N2—H2118.0N2—C4—S4109.93 (14)
N1—C1—H1A109.5S5—C4—S4124.59 (12)
N1—C1—H1B109.5N2—C5—H5A109.5
H1A—C1—H1B109.5N2—C5—H5B109.5
N1—C1—H1C109.5H5A—C5—H5B109.5
H1A—C1—H1C109.5N2—C5—H5C109.5
H1B—C1—H1C109.5H5A—C5—H5C109.5
N1—C2—S1127.70 (16)H5B—C5—H5C109.5
N1—C2—S2119.06 (14)
C2—S2—S3—C3−90.13 (11)S2—S3—C3—S4−177.57 (9)
C1—N1—C2—S1−0.4 (3)C5—N2—C4—S5−2.4 (3)
C1—N1—C2—S2179.97 (18)C5—N2—C4—S4175.1 (2)
S3—S2—C2—N1−0.01 (19)C3—S4—C4—N2172.23 (16)
S3—S2—C2—S1−179.71 (9)C3—S4—C4—S5−10.31 (17)
C4—S4—C3—S3−83.86 (14)
D—H···AD—HH···AD···AD—H···A
N1—H1···S30.862.503.073 (2)125
N1—H1···S3i0.863.023.595 (2)127
N2—H2···S1ii0.862.673.515 (2)168
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯S30.862.503.073 (2)125
N1—H1⋯S3i0.863.023.595 (2)127
N2—H2⋯S1ii0.862.673.515 (2)168

Symmetry codes: (i) ; (ii) .

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