| Literature DB >> 21587635 |
Feng Xu1, Zhen-Zhen Yang, Xiao-Fang Chen, Wen-Xiu Zheng.
Abstract
In the title compound, C(21)H(16)N(4)O, the central tetra-zine ring adopts an unsymmetrical boat conformation with the two N atoms as the bow and stern. The crystal packing is stabilized by inter-molecular N-H-O hydrogen bonds.Entities:
Year: 2010 PMID: 21587635 PMCID: PMC2983408 DOI: 10.1107/S1600536810038067
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C21H16N4O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 2254 reflections |
| θ = 3.4–27.5° | |
| µ = 0.09 mm−1 | |
| Column, yellow | |
| 0.43 × 0.27 × 0.27 mm |
| Rigaku AFC10/Saturn724+ diffractometer | 2128 reflections with |
| Radiation source: Rotating Anode | |
| graphite | θmax = 27.5°, θmin = 3.0° |
| Detector resolution: 28.5714 pixels mm-1 | |
| φ and ω scans | |
| 13708 measured reflections | |
| 2254 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2254 reflections | (Δ/σ)max = 0.001 |
| 239 parameters | Δρmax = 0.23 e Å−3 |
| 0 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.41566 (18) | 0.55133 (9) | 0.57735 (6) | 0.0169 (3) | |
| N1 | 0.1772 (2) | 0.56642 (12) | 0.50300 (7) | 0.0160 (3) | |
| N2 | 0.1136 (2) | 0.55047 (12) | 0.43512 (7) | 0.0166 (3) | |
| N4 | 0.0860 (2) | 0.74205 (12) | 0.44154 (7) | 0.0166 (3) | |
| N5 | 0.0366 (2) | 0.74009 (12) | 0.50949 (7) | 0.0171 (3) | |
| C3 | 0.0818 (2) | 0.64438 (14) | 0.40646 (8) | 0.0155 (3) | |
| C6 | 0.0824 (2) | 0.65060 (13) | 0.53963 (8) | 0.0153 (3) | |
| C7 | 0.0230 (2) | 0.62957 (14) | 0.60945 (8) | 0.0166 (4) | |
| C8 | 0.0051 (3) | 0.52210 (15) | 0.63299 (9) | 0.0203 (4) | |
| H8 | 0.0357 | 0.4620 | 0.6043 | 0.024* | |
| C9 | −0.0570 (3) | 0.50186 (15) | 0.69807 (9) | 0.0237 (4) | |
| H9 | −0.0689 | 0.4281 | 0.7137 | 0.028* | |
| C10 | −0.1015 (3) | 0.58866 (16) | 0.74016 (9) | 0.0234 (4) | |
| H10 | −0.1438 | 0.5747 | 0.7847 | 0.028* | |
| C11 | −0.0842 (3) | 0.69637 (16) | 0.71726 (9) | 0.0230 (4) | |
| H11 | −0.1144 | 0.7561 | 0.7463 | 0.028* | |
| C12 | −0.0230 (3) | 0.71750 (15) | 0.65229 (9) | 0.0197 (4) | |
| H12 | −0.0124 | 0.7914 | 0.6368 | 0.024* | |
| C13 | 0.0390 (2) | 0.64618 (14) | 0.33354 (8) | 0.0163 (3) | |
| C14 | 0.1052 (3) | 0.55940 (15) | 0.29386 (9) | 0.0203 (4) | |
| H14 | 0.1729 | 0.5004 | 0.3140 | 0.024* | |
| C15 | 0.0725 (3) | 0.55907 (16) | 0.22504 (9) | 0.0225 (4) | |
| H15 | 0.1169 | 0.4996 | 0.1982 | 0.027* | |
| C16 | −0.0250 (3) | 0.64547 (16) | 0.19537 (9) | 0.0217 (4) | |
| H16 | −0.0468 | 0.6453 | 0.1482 | 0.026* | |
| C17 | −0.0907 (3) | 0.73210 (16) | 0.23452 (9) | 0.0234 (4) | |
| H17 | −0.1570 | 0.7914 | 0.2141 | 0.028* | |
| C18 | −0.0594 (3) | 0.73225 (15) | 0.30386 (9) | 0.0200 (4) | |
| H18 | −0.1054 | 0.7913 | 0.3307 | 0.024* | |
| C19 | 0.3449 (2) | 0.52356 (13) | 0.52322 (8) | 0.0141 (3) | |
| C20 | 0.4384 (2) | 0.44072 (14) | 0.47866 (8) | 0.0153 (3) | |
| C21 | 0.6317 (3) | 0.45175 (15) | 0.46805 (9) | 0.0197 (4) | |
| H21 | 0.6976 | 0.5123 | 0.4872 | 0.024* | |
| C22 | 0.7276 (3) | 0.37442 (15) | 0.42963 (10) | 0.0242 (4) | |
| H22 | 0.8583 | 0.3833 | 0.4211 | 0.029* | |
| C23 | 0.6319 (3) | 0.28419 (16) | 0.40369 (9) | 0.0221 (4) | |
| H23 | 0.6978 | 0.2302 | 0.3782 | 0.027* | |
| C24 | 0.4404 (3) | 0.27244 (15) | 0.41477 (8) | 0.0207 (4) | |
| H24 | 0.3757 | 0.2104 | 0.3969 | 0.025* | |
| C25 | 0.3424 (3) | 0.35102 (14) | 0.45181 (9) | 0.0187 (4) | |
| H25 | 0.2108 | 0.3435 | 0.4587 | 0.022* | |
| H4N | 0.048 (3) | 0.8053 (17) | 0.4209 (10) | 0.020 (5)* |
| O1 | 0.0209 (6) | 0.0155 (6) | 0.0144 (5) | −0.0013 (5) | −0.0018 (5) | 0.0010 (4) |
| N1 | 0.0183 (7) | 0.0151 (7) | 0.0145 (6) | 0.0020 (6) | −0.0008 (6) | −0.0025 (6) |
| N2 | 0.0181 (7) | 0.0185 (7) | 0.0132 (6) | 0.0027 (6) | −0.0010 (6) | −0.0031 (6) |
| N4 | 0.0226 (7) | 0.0142 (7) | 0.0129 (6) | 0.0022 (6) | 0.0006 (6) | −0.0005 (5) |
| N5 | 0.0198 (7) | 0.0172 (7) | 0.0145 (7) | 0.0004 (6) | 0.0018 (6) | −0.0028 (5) |
| C3 | 0.0140 (8) | 0.0153 (8) | 0.0171 (7) | 0.0000 (7) | 0.0003 (6) | −0.0029 (6) |
| C6 | 0.0164 (8) | 0.0126 (8) | 0.0170 (8) | 0.0012 (7) | −0.0021 (6) | −0.0039 (6) |
| C7 | 0.0140 (8) | 0.0185 (9) | 0.0172 (8) | −0.0001 (7) | −0.0017 (6) | −0.0020 (7) |
| C8 | 0.0201 (9) | 0.0174 (8) | 0.0233 (8) | −0.0022 (7) | 0.0023 (7) | −0.0025 (7) |
| C9 | 0.0226 (9) | 0.0227 (10) | 0.0256 (9) | −0.0035 (8) | 0.0032 (8) | 0.0035 (7) |
| C10 | 0.0214 (9) | 0.0323 (10) | 0.0165 (8) | −0.0013 (8) | 0.0031 (7) | 0.0020 (7) |
| C11 | 0.0239 (9) | 0.0273 (10) | 0.0179 (8) | 0.0037 (8) | 0.0005 (7) | −0.0052 (7) |
| C12 | 0.0231 (9) | 0.0179 (8) | 0.0181 (8) | 0.0039 (8) | −0.0008 (7) | −0.0019 (7) |
| C13 | 0.0141 (8) | 0.0184 (8) | 0.0162 (7) | −0.0025 (7) | 0.0005 (6) | −0.0009 (6) |
| C14 | 0.0222 (9) | 0.0180 (9) | 0.0206 (8) | 0.0016 (7) | −0.0017 (7) | −0.0019 (7) |
| C15 | 0.0240 (9) | 0.0241 (9) | 0.0195 (8) | −0.0004 (9) | 0.0015 (7) | −0.0060 (7) |
| C16 | 0.0200 (8) | 0.0303 (10) | 0.0148 (7) | −0.0042 (8) | −0.0006 (7) | −0.0006 (7) |
| C17 | 0.0235 (9) | 0.0256 (10) | 0.0210 (8) | 0.0022 (8) | −0.0044 (7) | 0.0016 (7) |
| C18 | 0.0197 (9) | 0.0213 (9) | 0.0191 (8) | 0.0023 (8) | −0.0005 (7) | −0.0023 (7) |
| C19 | 0.0173 (8) | 0.0108 (7) | 0.0143 (7) | −0.0013 (7) | 0.0017 (6) | 0.0027 (6) |
| C20 | 0.0197 (8) | 0.0141 (8) | 0.0121 (7) | 0.0015 (7) | −0.0004 (6) | 0.0017 (6) |
| C21 | 0.0189 (9) | 0.0183 (9) | 0.0219 (8) | −0.0006 (7) | −0.0013 (7) | 0.0003 (7) |
| C22 | 0.0180 (9) | 0.0276 (10) | 0.0269 (9) | 0.0035 (8) | 0.0017 (7) | −0.0001 (8) |
| C23 | 0.0254 (10) | 0.0218 (9) | 0.0192 (8) | 0.0093 (8) | 0.0009 (7) | −0.0007 (7) |
| C24 | 0.0262 (9) | 0.0162 (8) | 0.0197 (8) | 0.0018 (8) | −0.0054 (7) | −0.0025 (7) |
| C25 | 0.0191 (8) | 0.0162 (8) | 0.0208 (8) | 0.0008 (8) | −0.0011 (7) | −0.0008 (7) |
| O1—C19 | 1.235 (2) | C13—C14 | 1.396 (2) |
| N1—C19 | 1.361 (2) | C14—C15 | 1.388 (2) |
| N1—C6 | 1.423 (2) | C14—H14 | 0.9500 |
| N1—N2 | 1.4363 (19) | C15—C16 | 1.387 (3) |
| N2—C3 | 1.292 (2) | C15—H15 | 0.9500 |
| N4—C3 | 1.374 (2) | C16—C17 | 1.388 (3) |
| N4—N5 | 1.3961 (19) | C16—H16 | 0.9500 |
| N4—H4N | 0.91 (2) | C17—C18 | 1.397 (2) |
| N5—C6 | 1.281 (2) | C17—H17 | 0.9500 |
| C3—C13 | 1.482 (2) | C18—H18 | 0.9500 |
| C6—C7 | 1.473 (2) | C19—C20 | 1.495 (2) |
| C7—C8 | 1.389 (3) | C20—C25 | 1.390 (2) |
| C7—C12 | 1.403 (2) | C20—C21 | 1.396 (2) |
| C8—C9 | 1.389 (3) | C21—C22 | 1.388 (3) |
| C8—H8 | 0.9500 | C21—H21 | 0.9500 |
| C9—C10 | 1.381 (3) | C22—C23 | 1.387 (3) |
| C9—H9 | 0.9500 | C22—H22 | 0.9500 |
| C10—C11 | 1.388 (3) | C23—C24 | 1.387 (3) |
| C10—H10 | 0.9500 | C23—H23 | 0.9500 |
| C11—C12 | 1.387 (2) | C24—C25 | 1.391 (3) |
| C11—H11 | 0.9500 | C24—H24 | 0.9500 |
| C12—H12 | 0.9500 | C25—H25 | 0.9500 |
| C13—C18 | 1.387 (2) | ||
| C19—N1—C6 | 122.48 (14) | C15—C14—H14 | 119.9 |
| C19—N1—N2 | 120.12 (13) | C13—C14—H14 | 119.9 |
| C6—N1—N2 | 115.36 (14) | C16—C15—C14 | 120.06 (17) |
| C3—N2—N1 | 110.55 (13) | C16—C15—H15 | 120.0 |
| C3—N4—N5 | 118.11 (14) | C14—C15—H15 | 120.0 |
| C3—N4—H4N | 119.3 (13) | C15—C16—C17 | 120.02 (16) |
| N5—N4—H4N | 112.0 (13) | C15—C16—H16 | 120.0 |
| C6—N5—N4 | 113.79 (14) | C17—C16—H16 | 120.0 |
| N2—C3—N4 | 122.04 (14) | C16—C17—C18 | 120.08 (18) |
| N2—C3—C13 | 118.71 (15) | C16—C17—H17 | 120.0 |
| N4—C3—C13 | 119.25 (15) | C18—C17—H17 | 120.0 |
| N5—C6—N1 | 119.17 (15) | C13—C18—C17 | 119.95 (17) |
| N5—C6—C7 | 120.97 (15) | C13—C18—H18 | 120.0 |
| N1—C6—C7 | 119.61 (15) | C17—C18—H18 | 120.0 |
| C8—C7—C12 | 119.05 (16) | O1—C19—N1 | 120.69 (15) |
| C8—C7—C6 | 120.39 (15) | O1—C19—C20 | 121.22 (15) |
| C12—C7—C6 | 120.52 (15) | N1—C19—C20 | 118.08 (14) |
| C9—C8—C7 | 120.56 (17) | C25—C20—C21 | 120.00 (17) |
| C9—C8—H8 | 119.7 | C25—C20—C19 | 122.27 (16) |
| C7—C8—H8 | 119.7 | C21—C20—C19 | 117.59 (16) |
| C10—C9—C8 | 120.20 (17) | C22—C21—C20 | 120.15 (18) |
| C10—C9—H9 | 119.9 | C22—C21—H21 | 119.9 |
| C8—C9—H9 | 119.9 | C20—C21—H21 | 119.9 |
| C9—C10—C11 | 119.80 (16) | C23—C22—C21 | 119.68 (18) |
| C9—C10—H10 | 120.1 | C23—C22—H22 | 120.2 |
| C11—C10—H10 | 120.1 | C21—C22—H22 | 120.2 |
| C12—C11—C10 | 120.47 (17) | C24—C23—C22 | 120.24 (18) |
| C12—C11—H11 | 119.8 | C24—C23—H23 | 119.9 |
| C10—C11—H11 | 119.8 | C22—C23—H23 | 119.9 |
| C11—C12—C7 | 119.92 (17) | C23—C24—C25 | 120.37 (18) |
| C11—C12—H12 | 120.0 | C23—C24—H24 | 119.8 |
| C7—C12—H12 | 120.0 | C25—C24—H24 | 119.8 |
| C18—C13—C14 | 119.71 (15) | C20—C25—C24 | 119.52 (17) |
| C18—C13—C3 | 122.06 (15) | C20—C25—H25 | 120.2 |
| C14—C13—C3 | 118.20 (16) | C24—C25—H25 | 120.2 |
| C15—C14—C13 | 120.18 (17) | ||
| C19—N1—N2—C3 | −123.18 (17) | N2—C3—C13—C14 | −25.1 (2) |
| C6—N1—N2—C3 | 41.0 (2) | N4—C3—C13—C14 | 155.04 (17) |
| C3—N4—N5—C6 | 33.1 (2) | C18—C13—C14—C15 | −0.1 (3) |
| N1—N2—C3—N4 | −8.0 (2) | C3—C13—C14—C15 | −178.39 (17) |
| N1—N2—C3—C13 | 172.13 (14) | C13—C14—C15—C16 | 0.5 (3) |
| N5—N4—C3—N2 | −30.0 (2) | C14—C15—C16—C17 | −0.3 (3) |
| N5—N4—C3—C13 | 149.85 (15) | C15—C16—C17—C18 | −0.2 (3) |
| N4—N5—C6—N1 | 0.9 (2) | C14—C13—C18—C17 | −0.4 (3) |
| N4—N5—C6—C7 | −173.36 (15) | C3—C13—C18—C17 | 177.78 (17) |
| C19—N1—C6—N5 | 124.94 (18) | C16—C17—C18—C13 | 0.6 (3) |
| N2—N1—C6—N5 | −38.8 (2) | C6—N1—C19—O1 | 5.0 (2) |
| C19—N1—C6—C7 | −60.7 (2) | N2—N1—C19—O1 | 168.06 (15) |
| N2—N1—C6—C7 | 135.50 (16) | C6—N1—C19—C20 | −176.05 (15) |
| N5—C6—C7—C8 | 154.45 (17) | N2—N1—C19—C20 | −13.0 (2) |
| N1—C6—C7—C8 | −19.8 (2) | O1—C19—C20—C25 | 130.67 (18) |
| N5—C6—C7—C12 | −23.1 (3) | N1—C19—C20—C25 | −48.2 (2) |
| N1—C6—C7—C12 | 162.63 (17) | O1—C19—C20—C21 | −45.1 (2) |
| C12—C7—C8—C9 | −0.1 (3) | N1—C19—C20—C21 | 136.01 (17) |
| C6—C7—C8—C9 | −177.77 (17) | C25—C20—C21—C22 | 1.2 (3) |
| C7—C8—C9—C10 | −0.1 (3) | C19—C20—C21—C22 | 177.08 (16) |
| C8—C9—C10—C11 | 0.1 (3) | C20—C21—C22—C23 | −2.1 (3) |
| C9—C10—C11—C12 | 0.2 (3) | C21—C22—C23—C24 | 1.4 (3) |
| C10—C11—C12—C7 | −0.5 (3) | C22—C23—C24—C25 | 0.1 (3) |
| C8—C7—C12—C11 | 0.4 (3) | C21—C20—C25—C24 | 0.3 (3) |
| C6—C7—C12—C11 | 178.06 (17) | C19—C20—C25—C24 | −175.30 (15) |
| N2—C3—C13—C18 | 156.66 (17) | C23—C24—C25—C20 | −1.0 (3) |
| N4—C3—C13—C18 | −23.2 (2) |
| H··· | ||||
| N4—H4N···O1i | 0.91 (2) | 1.97 (2) | 2.806 (2) | 150.9 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4 | 0.91 (2) | 1.97 (2) | 2.806 (2) | 150.9 (18) |
Symmetry code: (i) .