Literature DB >> 21587632

Methyl 2-meth-oxy-4-{[2-(4-nitro-phen-yl)hydrazinyl-idene]meth-yl}benzoate.

Zhen-Xin Zhao, He-Ping Li, Bu-Wei Ma.   

Abstract

The mol-ecule of the title Schiff base compound, C(16)H(15)N(3)O(5), obtained from a condensation reaction of 4-acet-oxy-3-meth-oxy-benzaldehyde and 4-nitro-phenyl-hydrazine, adopts an E geometry with respect to the C=N double bond. The mol-ecule is roughly planar, with the two benzene rings twisted slightly with respect to each other by a dihedral angle of 6.90 (9)°. In the crystal, inter-molecular N-H⋯O hydrogen bonds link centrosymmetrically related pairs of mol-ecules, forming dimers of R(2) (2)(22) graph-set motif. The dimers are further connected through slipped π-π inter-actions between symmetry-related benzene rings [centroid-centroid distance of 3.646 (1) Å, offset angle of 15.4°].

Entities:  

Year:  2010        PMID: 21587632      PMCID: PMC2983317          DOI: 10.1107/S160053681003802X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For potential applications of hydrazone derivatives, see: Okabe et al. (1993 ▶). For related structures, see: Szczesna & Urbanczyk-Lipkowska (2002 ▶); Zhen & Han (2005 ▶); Kuleshova et al. (2003 ▶); Baughman et al. (2004 ▶). For hydrogen-bond motifs, see: Etter et al. (1990 ▶); Bernstein et al. (1994 ▶).

Experimental

Crystal data

C16H15N3O5 M = 329.31 Monoclinic, a = 8.5983 (7) Å b = 14.6982 (9) Å c = 13.2096 (10) Å β = 107.860 (9)° V = 1589.0 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.23 × 0.20 × 0.19 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 1998 ▶) T min = 0.971, T max = 0.976 6773 measured reflections 3255 independent reflections 1397 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.072 S = 0.72 3255 reflections 219 parameters H-atom parameters constrained Δρmax = 0.13 e Å−3 Δρmin = −0.16 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEPIII (Burnett & Johnson, 1996 ▶), ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681003802X/dn2604sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681003802X/dn2604Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H15N3O5F(000) = 688
Mr = 329.31Dx = 1.377 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1694 reflections
a = 8.5983 (7) Åθ = 3.2–26.3°
b = 14.6982 (9) ŵ = 0.10 mm1
c = 13.2096 (10) ÅT = 293 K
β = 107.860 (9)°Block, red
V = 1589.0 (2) Å30.23 × 0.20 × 0.19 mm
Z = 4
Bruker SMART CCD area-detector diffractometer3255 independent reflections
Radiation source: fine-focus sealed tube1397 reflections with I > 2σ(I)
graphiteRint = 0.029
ω scansθmax = 26.4°, θmin = 3.2°
Absorption correction: multi-scan (SADABS; Bruker, 1998)h = −10→10
Tmin = 0.971, Tmax = 0.976k = −15→18
6773 measured reflectionsl = −16→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.072H-atom parameters constrained
S = 0.72w = 1/[σ2(Fo2) + (0.032P)2] where P = (Fo2 + 2Fc2)/3
3255 reflections(Δ/σ)max = 0.007
219 parametersΔρmax = 0.13 e Å3
0 restraintsΔρmin = −0.16 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.3583 (2)0.28271 (10)0.40773 (12)0.0934 (5)
O20.41338 (19)0.17034 (10)0.51701 (12)0.0912 (5)
O30.94760 (16)−0.07061 (8)−0.28742 (9)0.0600 (4)
O40.84502 (16)0.09303 (8)−0.37261 (9)0.0560 (4)
O51.10849 (17)0.12748 (8)−0.29655 (11)0.0628 (4)
N10.66329 (16)0.00919 (9)0.15774 (11)0.0493 (4)
H10.6925−0.04610.17500.059*
N20.68044 (17)0.04452 (9)0.06596 (11)0.0451 (4)
N30.4121 (2)0.20643 (13)0.43252 (14)0.0649 (5)
C10.6057 (2)0.02353 (12)0.32125 (14)0.0522 (5)
H1B0.6504−0.03390.34080.063*
C20.5452 (2)0.07193 (13)0.38904 (14)0.0553 (5)
H2B0.54950.04780.45490.066*
C30.4777 (2)0.15662 (12)0.35965 (15)0.0468 (5)
C40.4691 (2)0.19305 (11)0.26147 (14)0.0495 (5)
H4A0.42150.24980.24160.059*
C50.5311 (2)0.14503 (11)0.19376 (14)0.0468 (5)
H5A0.52660.16960.12800.056*
C60.6006 (2)0.06010 (12)0.22253 (14)0.0417 (4)
C70.7483 (2)−0.00733 (11)0.01437 (13)0.0452 (5)
H7A0.7806−0.06540.04030.054*
C80.7767 (2)0.02182 (11)−0.08375 (13)0.0403 (4)
C90.85046 (19)−0.03850 (11)−0.13560 (13)0.0434 (5)
H9A0.8822−0.0956−0.10610.052*
C100.8777 (2)−0.01552 (11)−0.23029 (14)0.0434 (5)
C110.8294 (2)0.06963 (12)−0.27239 (13)0.0449 (5)
C120.7565 (2)0.13013 (11)−0.22286 (15)0.0518 (5)
H12A0.72460.1870−0.25280.062*
C130.7300 (2)0.10665 (11)−0.12796 (15)0.0516 (5)
H13A0.68090.1479−0.09390.062*
C140.9936 (2)−0.15954 (11)−0.24715 (14)0.0632 (6)
H14A1.0419−0.1913−0.29350.095*
H14B0.8987−0.1920−0.24330.095*
H14C1.0714−0.1554−0.17740.095*
C150.9935 (3)0.12176 (12)−0.37443 (17)0.0507 (5)
C160.9907 (3)0.14511 (15)−0.48491 (15)0.0823 (7)
H16A0.90300.1868−0.51550.123*
H16B0.97480.0907−0.52710.123*
H16C1.09270.1728−0.48320.123*
U11U22U33U12U13U23
O10.1226 (15)0.0764 (11)0.0863 (11)0.0205 (11)0.0397 (10)−0.0154 (10)
O20.1189 (14)0.1058 (12)0.0648 (10)−0.0012 (10)0.0517 (10)−0.0052 (9)
O30.0790 (10)0.0505 (7)0.0600 (9)0.0083 (7)0.0352 (8)0.0004 (7)
O40.0524 (9)0.0728 (9)0.0439 (8)−0.0030 (8)0.0165 (7)0.0089 (7)
O50.0551 (9)0.0710 (9)0.0609 (9)−0.0025 (8)0.0159 (8)0.0054 (8)
N10.0584 (11)0.0466 (9)0.0481 (10)0.0032 (8)0.0239 (9)0.0052 (8)
N20.0454 (10)0.0511 (9)0.0398 (9)−0.0051 (8)0.0144 (8)0.0022 (8)
N30.0633 (13)0.0740 (13)0.0596 (13)−0.0106 (11)0.0220 (11)−0.0172 (11)
C10.0561 (14)0.0545 (11)0.0498 (12)0.0049 (10)0.0219 (11)0.0108 (10)
C20.0574 (14)0.0680 (13)0.0445 (12)−0.0063 (11)0.0214 (11)0.0074 (11)
C30.0452 (13)0.0533 (12)0.0450 (12)−0.0092 (10)0.0186 (10)−0.0085 (10)
C40.0509 (14)0.0436 (11)0.0530 (12)−0.0085 (10)0.0145 (11)−0.0036 (10)
C50.0546 (13)0.0444 (11)0.0428 (11)−0.0092 (10)0.0172 (10)0.0019 (9)
C60.0398 (11)0.0472 (11)0.0379 (11)−0.0100 (9)0.0117 (9)−0.0017 (9)
C70.0427 (13)0.0459 (11)0.0464 (12)−0.0054 (10)0.0131 (10)−0.0006 (9)
C80.0397 (12)0.0405 (10)0.0408 (11)−0.0068 (9)0.0124 (10)−0.0009 (9)
C90.0434 (13)0.0392 (10)0.0472 (12)−0.0011 (9)0.0131 (10)−0.0007 (9)
C100.0409 (12)0.0441 (11)0.0458 (12)−0.0023 (10)0.0144 (10)−0.0066 (10)
C110.0417 (12)0.0540 (12)0.0386 (11)−0.0017 (10)0.0117 (10)0.0044 (10)
C120.0548 (13)0.0447 (11)0.0599 (13)0.0036 (10)0.0238 (11)0.0082 (10)
C130.0561 (13)0.0457 (11)0.0592 (13)0.0017 (10)0.0268 (11)−0.0035 (10)
C140.0789 (16)0.0483 (11)0.0683 (14)0.0097 (11)0.0316 (13)−0.0045 (11)
C150.0583 (14)0.0454 (11)0.0525 (13)0.0064 (11)0.0232 (12)0.0019 (10)
C160.0886 (18)0.1103 (17)0.0573 (14)−0.0082 (15)0.0361 (13)0.0100 (13)
O1—N31.2188 (18)C5—C61.386 (2)
O2—N31.2326 (18)C5—H5A0.9300
O3—C101.3655 (18)C7—C81.455 (2)
O3—C141.4210 (18)C7—H7A0.9300
O4—C151.352 (2)C8—C131.383 (2)
O4—C111.4135 (18)C8—C91.387 (2)
O5—C151.191 (2)C9—C101.383 (2)
N1—C61.3663 (18)C9—H9A0.9300
N1—N21.3678 (16)C10—C111.381 (2)
N1—H10.8600C11—C121.365 (2)
N2—C71.2766 (18)C12—C131.385 (2)
N3—C31.454 (2)C12—H12A0.9300
C1—C21.366 (2)C13—H13A0.9300
C1—C61.399 (2)C14—H14A0.9600
C1—H1B0.9300C14—H14B0.9600
C2—C31.378 (2)C14—H14C0.9600
C2—H2B0.9300C15—C161.492 (2)
C3—C41.384 (2)C16—H16A0.9600
C4—C51.369 (2)C16—H16B0.9600
C4—H4A0.9300C16—H16C0.9600
C10—O3—C14117.25 (13)C9—C8—C7118.60 (16)
C15—O4—C11117.01 (14)C10—C9—C8121.35 (16)
C6—N1—N2121.19 (14)C10—C9—H9A119.3
C6—N1—H1119.4C8—C9—H9A119.3
N2—N1—H1119.4O3—C10—C11116.35 (16)
C7—N2—N1115.96 (14)O3—C10—C9125.47 (16)
O1—N3—O2122.44 (18)C11—C10—C9118.18 (16)
O1—N3—C3118.54 (18)C12—C11—C10121.53 (17)
O2—N3—C3119.02 (19)C12—C11—O4118.68 (16)
C2—C1—C6120.11 (17)C10—C11—O4119.64 (16)
C2—C1—H1B119.9C11—C12—C13119.91 (16)
C6—C1—H1B119.9C11—C12—H12A120.0
C1—C2—C3119.87 (17)C13—C12—H12A120.0
C1—C2—H2B120.1C8—C13—C12120.00 (16)
C3—C2—H2B120.1C8—C13—H13A120.0
C2—C3—C4120.70 (17)C12—C13—H13A120.0
C2—C3—N3118.93 (18)O3—C14—H14A109.5
C4—C3—N3120.36 (18)O3—C14—H14B109.5
C5—C4—C3119.54 (17)H14A—C14—H14B109.5
C5—C4—H4A120.2O3—C14—H14C109.5
C3—C4—H4A120.2H14A—C14—H14C109.5
C4—C5—C6120.43 (16)H14B—C14—H14C109.5
C4—C5—H5A119.8O5—C15—O4123.01 (18)
C6—C5—H5A119.8O5—C15—C16126.1 (2)
N1—C6—C5122.77 (16)O4—C15—C16110.93 (19)
N1—C6—C1117.89 (16)C15—C16—H16A109.5
C5—C6—C1119.33 (17)C15—C16—H16B109.5
N2—C7—C8121.93 (16)H16A—C16—H16B109.5
N2—C7—H7A119.0C15—C16—H16C109.5
C8—C7—H7A119.0H16A—C16—H16C109.5
C13—C8—C9119.02 (16)H16B—C16—H16C109.5
C13—C8—C7122.37 (16)
D—H···AD—HH···AD···AD—H···A
N1—H1···O5i0.862.293.0068 (19)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯O5i0.862.293.0068 (19)141

Symmetry code: (i) .

  4 in total

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3.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

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Journal:  Acta Crystallogr B       Date:  1990-04-01

4.  Structure validation in chemical crystallography.

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